Polyergus mexicanus: 138937333
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Entry
138937333 CDS
T10742
Symbol
Hbs1
Name
(RefSeq) protein HBS1
KO
K14416
elongation factor 1 alpha-like protein
Organism
pmec Polyergus mexicanus
Pathway
pmec03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pmec00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
138937333 (Hbs1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pmec03019
]
138937333 (Hbs1)
Messenger RNA biogenesis [BR:
pmec03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
138937333 (Hbs1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
MMR_HSR1
HBS1_N
AAA_22
Ras
Dynamin_N
Motif
Other DBs
NCBI-GeneID:
138937333
NCBI-ProteinID:
XP_070159606
LinkDB
All DBs
Position
Unknown
AA seq
692 aa
AA seq
DB search
MSRHRDVRCMNYSDEYDGYDDVYGHSVEDDYCVSPSVEQFLFDRSKQQNIASFITEPDIV
EDNEDIDESSTSLNENKYDLPKLEKAKLIYCLEAIRSVIGDTVSESKLKEKIIASNFDTD
VALDAILKESSPKNDPAISKERLERYPGNKLSSKSALQITTPSTVKVVPAGTKPVVKGFD
LSGVENADLPNPRCESPSSNRNSPETKRKVDIIQREKKTISWKTNSPRCQSPISGHVTPE
LDLKGKSNAANEEKVDVQAIYKSKRGDNKEQLHLVVVGHVDAGKSTLLGRLLCDLGQVPQ
RLIHKYQQESKKIGKQSFVYAWVLDETGEERERGITMDIGHSKFETDTKSITLLDAPGHK
DFIPNMITGATQADVALLVVDATRGEFETGFDSGGQTREHALLLRSLGVSQLAVVVNKLD
TVNWSKDRFNEIVDKISVFLKQAGFKDTVTFVPCSGLSGENIVTKPKEQLSNWYTGPTLI
NVIDNFKCPERPVNKPFRFSVNDIFKGTGSGFCVSGHIETGMVSLGDKVLILPQNEIAVV
KGLQLDEISMVNAFAGDHVALTLAGIDQQNVGIGDIICNPQNPVPVTTCFQAHIVVFAIA
RPITKGLPVVMHQQSLVQPAFITKLIAQLHRGTGDMIKKKPRCLPKNSSAIIEVVTQNPV
CMELYKDIKQLGRVMLRLEGTTIAAGLITKIL
NT seq
2079 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcgacatcgagacgtccgttgtatgaattattcagatgagtacgatggctacgat
gatgtatatgggcattcggtagaagacgattattgtgtatcacctagcgtggagcagttt
ttattcgatcgaagcaaacaacagaatattgcttcatttatcacggaaccagatatagta
gaagacaatgaggatattgatgaatcttcgacatcacttaatgaaaataaatatgatctc
cccaagttggaaaaggcaaagctaatatattgtttagaagcaatcagaagcgtcataggt
gatactgtgtctgaatctaagttgaaagaaaaaattattgcatcaaactttgatacagat
gtagcgcttgatgctattttaaaggaatcttcgccgaaaaatgatccagcaataagtaag
gaacgattggaacgatatccaggtaacaaattatcatccaagtctgcattgcaaattaca
acgccttctaccgtgaaggttgttcctgctggaacaaaacccgtcgtgaagggtttcgat
ctaagcggtgtagaaaacgcagatttaccgaatccacgctgcgagagcccgtcttccaat
cgaaacagtcctgaaactaaacgcaaagtggatatcatacagagagagaagaaaacgatt
tcgtggaaaactaacagtccgagatgtcaatcacccatatcgggtcatgtaacaccagaa
ttagatctcaaaggaaaatccaacgcagctaatgaagagaaagttgatgttcaagcaata
tataagagcaagaggggtgataacaaggagcagcttcacttggtagttgtgggacatgtc
gacgctggaaaaagcacgctgctgggacgactactatgtgatttgggtcaagtgccgcaa
agactcattcacaaatatcagcaagagagtaagaagatagggaagcagtctttcgtctac
gcttgggtgctcgatgaaactggtgaagaaagagagcgaggaataacaatggatataggt
cattcgaagtttgaaacggacacaaaatctatcactctgctagatgcgcctggccacaag
gattttattccaaatatgatcaccggcgctacgcaagcagacgtagctttattggtggtt
gatgcgaccagaggcgagtttgaaactggatttgacagcgggggacaaacacgcgagcac
gcactgttacttcgttctttgggagtatcgcagctagcagtagtcgtaaataaacttgat
actgtaaattggtccaaggacagattcaacgagatagtcgacaaaataagcgttttcttg
aaacaagctggttttaaagatactgttacctttgtaccttgtagtggtttatccggcgaa
aatatcgtgacgaaaccaaaggagcagctctctaactggtataccggacctactttaatc
aatgtaattgataatttcaaatgcccggagcgacctgtaaataaaccattccgtttctcg
gtcaacgatatatttaagggtaccgggtccggattctgtgtatccggtcacattgaaacg
ggtatggtgtccttaggtgacaaggtattaatactacctcaaaacgagattgcggtcgtt
aaaggtctccagttggacgagatctcgatggtaaacgcgttcgccggtgatcacgttgcg
ctgacattagcagggattgatcagcaaaacgtaggcatcggcgatattatttgtaatccg
cagaatccagtgcccgtaacaacgtgctttcaagcgcacatagttgtatttgcaatagcg
agaccaatcacgaaagggcttccagtggtgatgcatcagcagtctttagtacagccagcg
tttatcacgaaattaatagcgcaacttcatcgaggtaccggtgacatgatcaagaagaaa
ccgcgctgcttaccgaagaattctagcgcaatcatcgaggttgtaacacaaaatccagtc
tgcatggagttgtacaaggatattaagcagctaggaagagttatgttacgattagagggt
accaccattgcagctggtttgattacaaagattttgtaa
DBGET
integrated database retrieval system
