Polyergus mexicanus: 138937900
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Entry
138937900 CDS
T10742
Name
(RefSeq) ATP-dependent RNA helicase DDX54 isoform X1
KO
K14808
ATP-dependent RNA helicase DDX54/DBP10 [EC:
5.6.2.7
]
Organism
pmec Polyergus mexicanus
Brite
KEGG Orthology (KO) [BR:
pmec00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pmec03009
]
138937900
Enzymes [BR:
pmec01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
138937900
Ribosome biogenesis [BR:
pmec03009
]
Eukaryotic type
Pre-60S particles
Helicases
138937900
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
DBP10CT
Motif
Other DBs
NCBI-GeneID:
138937900
NCBI-ProteinID:
XP_070160670
LinkDB
All DBs
Position
Unknown
AA seq
750 aa
AA seq
DB search
MKISKKSGGFQSMALSFPILKGILKRGYKIPTPIQRKTIPLALEGRDIVAMARTGSGKTA
CFLIPLFEKLKARQTKTGARALILSPTRELALQTLKFIKELGRFTGLKAVVILGGDSMDN
QFSIIHENPDIIVATPGRLLHICIEMDLKLKNVEYIVFDEADRLFEMGFGEQIHEIVNRL
SESRQTLLFSATLPKILVDFAKAGLSDPVLLRLDVESKLPEGLTLSFITCRSEEKLAILL
CLLKRVIKSDSQTIIFAETMHHVEYIHQILDKANISNTFIYSNLDPSARKINAAKFQTGK
VKVLIVTDVAARGIDIPYLDCVINFNFPAKSKLFVHRVGRCARAGRVGTAYNIVSSDEYP
YLLDLHLFLGRPLTIMPATGSIENTESAVGKMPQSMIEEELGELINWHNSSTDLTNMQKV
CNNAYQRYIRSRPGASIESVKRVKELCINEAGILPQYSDVSPIATDIISRMKNYRPQGTI
FEIGIKANSIDYQVMKTKRLFHKENIFNFHKKMEDHKTEEINMASKNLLQKTNLPSSSVE
EINAVFSTVVVPKKRNSDDLYKISKKKKTHTKRDEEYYIPYFAPDKHTEEGLAVNTFATE
ADKAQMDLMADNEEGQHLQKQLKKWDRKKKKMVTVDRDPKAKKIRTESGVWIPATYKTNR
YNMWKEKSKVDENDSGSDNEQESLQQNLRTTANTHWARHNQKLKDKVKAKNELKRPEQIL
KARKLLERKHRRNGRKSGKGKGKKNHKRKH
NT seq
2253 nt
NT seq
+upstream
nt +downstream
nt
atgaagatttccaagaaatctggaggatttcaatccatggctctcagttttccaatatta
aaaggaatcctcaaacggggctataaaatacccacacccatacaaagaaaaactattcca
ttagctctcgagggaagagatatagtagcaatggctagaacgggtagcgggaaaactgct
tgctttttaattcctttgttcgaaaaactcaaggcgaggcaaacaaagactggagcacgc
gcgttgatattatcgcccacacgagagctggcattgcagacattgaaatttataaaggag
ttgggaagatttacaggattaaaggcagttgtgatattgggtggtgatagtatggataat
cagttcagtataattcacgagaatcctgatatcattgtagctacaccagggagactttta
catatatgtatagaaatggacctgaaattgaaaaatgtcgaatatattgtctttgacgaa
gctgatagactctttgaaatgggatttggggaacaaatacatgagatcgtaaacagatta
tctgaatcgcgtcaaacgttgttgttctctgctactttgcccaaaatcttagtagacttt
gcaaaagctggtctaagtgatccagttctacttcgtttagatgttgagagtaaattgcct
gaagggctaacgttatcgtttattacatgtcgctctgaagagaaattggccatccttctg
tgcttgttaaaaagggttattaagtccgattcgcaaacaattatattcgcggaaactatg
catcatgtggaatatattcaccagatattggataaagcgaacatctctaatacttttatt
tactcgaatctggatccttctgcgcgtaaaataaacgcggctaaatttcaaactggcaaa
gtaaaagttcttatagtaacggacgttgctgctagaggaatagatataccatatttagat
tgtgtgattaactttaattttcctgcaaaatctaaactctttgtacatagagtaggacga
tgcgctcgagctggacgtgttggaacagcgtataatattgtgagctcggacgagtatcct
tatctcctagatttacacctctttcttggtcggcctttaacaataatgccggctacagga
tccatcgaaaatacggaatctgctgtgggaaaaatgccacaatccatgatagaggaggaa
ttaggcgaattaataaattggcacaatagctctacagatcttacaaatatgcagaaggtg
tgtaacaatgcttatcaacgatatatcagatcgcgaccaggtgcttcgatagaaagtgtt
aaaagagtcaaagaactttgtataaatgaagctggaattctaccacagtattctgatgtt
tcccctatagcaacagatataatatccaggatgaaaaactatagaccacagggaacgata
tttgagattggtataaaagcgaattcaattgattaccaagtgatgaagacgaaacgatta
tttcacaaagagaacatctttaattttcacaaaaaaatggaagatcacaaaactgaagaa
attaacatggcatcaaaaaacttgcttcaaaaaactaatctgccatccagtagtgtagaa
gaaattaatgctgtatttagtacagtagtagttccaaaaaaaagaaatagtgacgattta
tataaaatttcgaagaaaaagaaaacgcacacaaaacgagatgaagaatattatatacct
tatttcgcaccagacaaacatacagaggaaggtttagccgttaatacatttgccacagaa
gctgataaggcacagatggatttaatggcagacaatgaagagggccaacatcttcaaaag
caattaaaaaaatgggatcggaagaaaaagaaaatggtcactgttgatagggatccgaaa
gcgaaaaaaatacgtactgaatctggtgtatggatacctgctacatacaaaacgaatcgg
tataacatgtggaaggagaagagtaaagttgatgaaaatgatagcgggagtgataatgag
caagaatctttacaacaaaacttgcgaacaacagcaaatacacattgggcgcggcataat
cagaaactaaaggacaaagttaaagcaaagaacgagctgaaaaggcccgaacaaatctta
aaagcgcgcaagttgctcgaaagaaagcatcgaagaaacggtagaaaaagtggtaaaggt
aaaggtaaaaaaaatcacaaaaggaagcattga
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