Polyergus mexicanus: 138938476
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Entry
138938476 CDS
T10742
Symbol
Atg16
Name
(RefSeq) autophagy-related protein 16-1 isoform X1
KO
K17890
autophagy-related protein 16-1
Organism
pmec Polyergus mexicanus
Pathway
pmec04136
Autophagy - other
pmec04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
pmec00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
138938476 (Atg16)
04136 Autophagy - other
138938476 (Atg16)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pmec04131
]
138938476 (Atg16)
03029 Mitochondrial biogenesis [BR:
pmec03029
]
138938476 (Atg16)
Membrane trafficking [BR:
pmec04131
]
Autophagy
Autophagosome formation proteins
Atg12 conjugation proteins
138938476 (Atg16)
Others
Specific organelles associated proteins
Auto phagosome
138938476 (Atg16)
Mitochondrial biogenesis [BR:
pmec03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
138938476 (Atg16)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR5
Beta-prop_WDR3_1st
Beta-prop_THOC3
WD40
WD40_Prp19
ATG16
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_WDR36-Utp21_2nd
EIF3I
Beta-prop_WDR3_2nd
Beta-prop_TEP1_2nd
WDR55
WD40_Gbeta
Beta-prop_CAF1B_HIR1
Beta-prop_EML
Beta-prop_WDR36-Utp21_1st
Beta-prop_Aladin
Beta-prop_TEP1_C
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
ANAPC4_WD40
Beta-prop_RIG_2nd
WD40_MABP1-WDR62_1st
NBCH_WD40
WDR90_beta-prop_4th
Beta-prop_IFT140_1st
Beta-prop_IFT122_1st
Tricorn_2nd
Beta-prop_DCAF4
Beta-prop_WDR19_1st
eIF2A
Beta-prop_WDR75_1st
Beta-prop_EIPR1
Beta-prop_SPT8
Beta-prop_WDR35_TULP_N
Beta-prop_HPS5
Beta-prop_SCAP
Beta-prop_ACSF4
Beta-prop_WDR41
WD40_RFWD3
PEP5_VPS11_N
Cytochrom_D1
RMC1_N
Beta-prop_Vps41
Ge1_WD40
Cluap1
Beta-prop_VPS8
UCH
HbrB
Fez1
Motif
Other DBs
NCBI-GeneID:
138938476
NCBI-ProteinID:
XP_070161576
LinkDB
All DBs
Position
Unknown
AA seq
567 aa
AA seq
DB search
MTSNEAGVSLVPRDDINWRKDLISQLRERNRSQTNCFADLISLHNRLFENANTLRNSNMQ
LTIANETLRREAANGTIGVGGNPDLEARLLKQAEELAMLHKRKGEHTQQIVDLNNKLQEI
TKELQAKEISLAESLEANTSLRLEITKCLTREKEIECINQMLKDEHQALQLAFASLEEKL
RKTQEENRQLIERLIKYKARDAEKMNEENDNFLSFTSPTAFLMHTLSKFGKRQAKMQKEL
EDAARDTRPVSPDRLSLKEVAGLPTAVPTKVSVTFSAHEGEVYAVKWSPTDRMLATGGAD
RKVKLWNITKGTSESKGILVGSNAGVMSVDFDSTGILILGASNDYASRVWTVSDLRLKHT
LTGHCAKVMAAKFLGEPSKVVTGSYDRTLKIWDLRSKACIETKFAGSSCNDLVTSDGAGS
TIISGHFDQRIRFWDTRAESSSNDILLEGKVTSLDLSRDANYLLSCVRDDTLKLIDLRMK
KIVGSFSADGFKVGFDWTRAAFSPDGQYIAVGSADGSVFIWSIATNLIETILKGHTAAVT
AVSWHPHGTYLASIDRAKTVTVWGDHV
NT seq
1704 nt
NT seq
+upstream
nt +downstream
nt
atgacctcgaatgaagcaggcgtatcgctcgttcctcgagatgacatcaattggcggaaa
gatttaatttcgcaattacgcgaaagaaacagatcgcaaaccaattgttttgcagatctc
attagtctgcataatagattatttgaaaatgcaaatacgttgcgaaattcaaacatgcaa
ttgacaattgcaaatgaaactcttcgtcgtgaggcagccaatggcactattggcgtaggt
ggaaatcctgatcttgaagctagacttttaaaacaagcagaagaattggcgatgctacat
aagagaaaaggagaacatacacaacaaatagtagatcttaataataaattgcaagaaata
acaaaggaacttcaagcaaaggaaatcagtcttgcagaaagtttggaagctaataccagt
ttacgtttagaaataactaaatgtcttactagagaaaaggaaatagaatgtattaatcag
atgcttaaagatgaacatcaggccttgcaacttgcttttgcttctttagaggagaagctt
agaaaaacacaggaagaaaatcgacaactaattgaacgtttaataaaatataaagctaga
gatgcagaaaaaatgaatgaagagaatgacaactttttaagttttacgagtccaacagcc
tttttgatgcataccttatcaaagtttggaaagaggcaagcaaagatgcaaaaagaattg
gaagatgcagcacgagatacacgacctgttagcccagatcgtttaagcttaaaagaagtc
gctggtcttccgacagcagtgccaacaaaagtatccgtaacatttagtgcccatgaagga
gaagtatatgctgtcaaatggtcgcctactgatagaatgctggctactggtggtgctgac
aggaaagtgaaactatggaacattactaaaggtacatcggagagcaaaggcatcctcgtc
ggcagcaacgccggtgtcatgtcggtggactttgattcgacgggcatccttattcttgga
gcgtccaacgattatgcgagccgcgtctggaccgtcagcgatcttcgtctaaagcacacg
ctcacgggccactgcgcaaaggtgatggcggcgaagtttcttggcgagccgtcaaaagta
gttacgggaagttatgatcgcacgttaaaaatctgggatctacgcagcaaagcatgtata
gagacgaaatttgctggatctagttgcaacgacctcgtaacttcagacggtgctggctcc
acgataatcagtggtcattttgatcaaagaatcagattttgggatacgagagctgaatct
agctcaaatgacattctactggaaggaaaagttacatccttagatttgtcccgtgacgca
aattatcttttgagttgcgtgagggatgacacgttgaaattgattgatctacgaatgaag
aagattgttgggtccttcagcgctgacggtttcaaagtgggattcgattggacaagagcc
gctttcagtcctgacgggcagtacatagcggttggttccgcagacggttccgtctttatt
tggtctatagcgacgaatctgatcgaaacaatactaaagggacatacggcagcagtaacc
gccgtatcttggcacccgcacggcacgtacttggcgtctatcgatcgcgccaagacagtg
acagtttggggcgaccacgtttga
DBGET
integrated database retrieval system
