Polyergus mexicanus: 138938595
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Entry
138938595 CDS
T10742
Symbol
Snr1
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1
KO
K11648
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1
Organism
pmec Polyergus mexicanus
Pathway
pmec03082
ATP-dependent chromatin remodeling
pmec03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
pmec00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
138938595 (Snr1)
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
138938595 (Snr1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
pmec01009
]
138938595 (Snr1)
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pmec03021
]
138938595 (Snr1)
03036 Chromosome and associated proteins [BR:
pmec03036
]
138938595 (Snr1)
Protein phosphatases and associated proteins [BR:
pmec01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
138938595 (Snr1)
Transcription machinery [BR:
pmec03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
138938595 (Snr1)
SWI/SNF complex
138938595 (Snr1)
Chromosome and associated proteins [BR:
pmec03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
138938595 (Snr1)
PBAF complex
138938595 (Snr1)
SWI/SNF complex
138938595 (Snr1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF5
INI1_DNA-bd
Motif
Other DBs
NCBI-GeneID:
138938595
NCBI-ProteinID:
XP_070161794
LinkDB
All DBs
Position
Unknown
AA seq
369 aa
AA seq
DB search
MALRTYGDKPISFQVEENGEYYCIGSEVGNYLRLFRGSLYKRYPGMFRRSITNDERKKLV
ELGLSQHVLASSVSLLRASEVEDIIEGNDDKYKAVSVHSTEPPAPREGKSKKSMAWVPSL
PNSSHLDAVPQATPINRNRVHNKKVRTFPLCFDDTDPSANLENAAQQEMLVPIRLDMEIE
GQKLRDTFTWNKNESLITPEQFAEVLCDDLDLNPLTFVPAIAQAIRQQIEAFPQETILED
QYDQRVIIKLNIHVGNTSLVDQVEWDMSEKENNPEKFAMKLCAELGLGGEFVTAIAYSVR
GQLSWHQRTYAFSEAPLPTVEVPFRPPSEADQWAPFLETLTDAEMEKKIRDQDRNTRRMR
RLANTTPGW
NT seq
1110 nt
NT seq
+upstream
nt +downstream
nt
atggcgttacgcacctatggagacaaacccataagtttccaagtagaagaaaatggagaa
tattactgcattggatcggaagttggcaattacctgcgtctttttcgtgggtctttgtat
aaacgatatcctggcatgtttaggaggtccataaccaatgacgaacgtaagaaattagtg
gagcttggattaagccaacacgttctagcatccagcgtctcgttattgagagctagcgag
gtagaggatattatagagggcaatgatgataaatacaaagctgtatctgtgcattcaact
gagccaccggcacccagagaaggtaaatccaaaaagtcgatggcatgggtgcccagtttg
ccaaacagttcacacttggatgcagttcctcaagctacgccaataaatcgtaatagagtg
cacaataaaaaagttagaacgtttccattatgttttgatgatacagatccatcagcaaac
ttggaaaatgcagcacaacaggaaatgctcgtcccgatccgtttagatatggaaattgaa
ggtcagaaattaagggacactttcacttggaataaaaacgaaagtcttataacacccgaa
cagttcgccgaagtactatgcgatgatctagacttaaatccattaacgtttgttcctgca
attgcgcaagcgataaggcaacaaatagaagcattcccacaggaaactattctagaagat
caatacgatcagcgagtaataatcaagttaaacatacatgtaggcaatacgtctttagta
gatcaagtagaatgggatatgtctgagaaagagaacaatccggagaaatttgcgatgaag
ctttgcgcggaactcggtctcggcggagaatttgtcaccgcaattgcttacagtgtacgc
ggacaattgtcgtggcatcagagaacgtacgcattttccgaagcgccgctccctaccgtg
gaagtcccttttagacctccgtcagaggccgatcaatgggcaccattcttggaaacttta
acggacgcggagatggagaagaagatacgcgatcaggatcgaaatactcgacgtatgcga
cgtttagcaaacacgacacctggctggtag
DBGET
integrated database retrieval system
