Polyergus mexicanus: 138938608
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Entry
138938608 CDS
T10742
Symbol
Sym
Name
(RefSeq) symplekin
KO
K06100
symplekin
Organism
pmec Polyergus mexicanus
Pathway
pmec03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pmec00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
138938608 (Sym)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pmec03021
]
138938608 (Sym)
03019 Messenger RNA biogenesis [BR:
pmec03019
]
138938608 (Sym)
Transcription machinery [BR:
pmec03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
138938608 (Sym)
Messenger RNA biogenesis [BR:
pmec03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
138938608 (Sym)
U7-dependent histone pre-mRNA processing factors
138938608 (Sym)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Symplekin_C
SYMPK_PTA1_N
Motif
Other DBs
NCBI-GeneID:
138938608
NCBI-ProteinID:
XP_070161824
LinkDB
All DBs
Position
Unknown
AA seq
1112 aa
AA seq
DB search
MDPRLHRRSEPEKGSGDLIVEWINEASMNPSEEVKVANICKIQEFLLNKEPHLLELYLDD
VLQFSINRSAEVRKTITGFIEEAGIKQPEVIPRIVQILLTLASDETSAVAKRALRASGRI
LRAALKWIASATVVTPEMELAWTQLSALKVQIINMIDSDNDGIRTQAVKFLEGVILIQTY
PDPDNPKKLDDFSLEDIPLTLKIARRRKLEEEANHVMDLLIKFHGSPHVSSVNLMTCMGS
LALIAKMRPQFMPNVIQALQRLQHDLPPTLSDSQVTSVQKQLKLTLLGLIKHPASVEYAS
TIAKQLAQLGAKEQEIIKAYPKPEDIRRIKKRQQEVAAASAAKRAKIDVALISEEVEAAS
SLLPSFKLPELIELSESFIAERLSVEIATDLVMDSMAWVPDTMTTIFQREYQPTATTDIN
IQRQTIAKLLAAQIKQTKAKKHKKDTKEEDAVMEDLIKNPTISVAEAKRERKREKDREKE
KEAKASLEAHEKSLAKARNRLKALKLTEVTKPLSKETKERMLSMAVNRILLSEKTAVLGG
VAAIRSKILTTLAATFNPYIKEAVLRYITDDMRNRLDLALGWLYEEYALLQGFQRRTTLC
TKPQEAPHQAYNFLLCTLVSAIDLVQGKDRDTLLSRLYLEAPLITEDAVEALKMVSSDEI
RGLAPLQLLKEMVVRRPTKQLVFLNVLLCHTGHENNTIREAAIQLVCQLYSRPELSKLIE
EYAVLYLGFLRLHNPPEIVFGQDRGRPQIESQWTESTTRACLGLYLALLSEHQDLIHELA
RVYTSMAADVKRIVLRLVEGPVRSLGMGSPQLLALVENCPKGSETLVTRIIHILTEKSAP
STELVARVRELYQTRVSDVRFLIPVLNGLTKKEVIAALPKLIKLNPIVVKEVFNRLLGTH
NNDSGVPHTSPITPAELLIALHNIDSSKAELKTVIKATSLCFAEKQAYTQETVAVVMQHL
MEMTPLPTLLMRTVIQSLALYPRLSGFVMNILQRLILKQVWKQPKVWEGFVKCCERTQPQ
SFAVILQLPPAQLAEALRMASNLRAPLLAHVEAFAENQKAHIPQSIMDVIQGKVLCDMHD
EFDIAPPDDYSNDQKPDTMEIDLSEPAPPGLD
NT seq
3339 nt
NT seq
+upstream
nt +downstream
nt
atggatccacgtttgcatagaagatccgagccggaaaagggatcgggcgatttgattgtt
gaatggataaatgaggcttctatgaacccctctgaagaagttaaggtcgcaaatatatgt
aaaatacaggaatttttgttgaataaagaaccacatttgttagagctttacttggacgat
gttcttcaattttcgataaatagaagcgctgaagtcaggaaaactattacaggatttatc
gaagaagctggaataaaacaaccagaggtaatccctcgtatagttcaaatacttcttaca
ttagcatcggatgaaacatcagctgtggctaaacgtgcacttagagccagtggtagaatt
cttagagctgctctcaaatggattgctagcgctactgtcgttacaccagaaatggagttg
gcatggactcaactaagtgccctcaaagttcaaatcataaatatgattgacagtgataac
gatggaataagaacacaagctgtaaaattccttgaaggtgtaattctaatacagacatat
ccagatcctgacaatccaaagaaactggatgacttttctcttgaagatattccgctaaca
ctgaaaatagctcgtagacgaaaattagaagaagaagcaaatcatgttatggatttgttg
attaagtttcatggatctccacatgttagtagcgtcaatttaatgacatgcatgggatca
ttggcgttaattgctaaaatgagaccacagtttatgccaaatgtaattcaagctttacag
aggttgcaacatgatcttccaccaacactatctgattctcaagtaactagtgtacaaaaa
caattaaaacttacacttcttggattaataaaacatcctgctagtgtagaatatgcttca
accatagctaaacaattagctcaacttggagcaaaagagcaggaaattattaaggcctat
ccaaagccagaagatattcgtcgaataaaaaagcgtcaacaggaagtagcagctgctagt
gctgcaaaacgagcaaaaattgatgtggctctaatatccgaggaagtagaagcggcctca
agtcttcttccttcatttaaattaccagaattgattgaactttctgaaagttttattgct
gaaagactcagtgtagagattgcaacagatttagtgatggacagtatggcatgggtaccg
gatactatgacaacaattttccaaagggaatatcaacctactgcaactactgatattaat
atacaacgtcaaacaatcgccaaactgttagcggcgcaaatcaaacaaactaaagcaaaa
aagcacaaaaaagataccaaggaggaagatgctgtaatggaagatttaattaagaatccc
actattagcgtagctgaggcaaagcgtgaacgtaaacgcgaaaaagatcgcgaaaaggag
aaagaagcgaaagcatcattggaggctcatgaaaaatctcttgcaaaagctagaaatcgt
ttgaaggcattaaaattaactgaagtgacaaagccactttcaaaggaaactaaagagcga
atgttatcgatggcagtcaatcgaatattactttcagaaaagactgcagttctcggtggc
gtagctgctataagatctaaaattctgactactctggcagctacttttaatccttatatt
aaggaagctgtactgcgatatattaccgatgatatgcgaaatcgattagatctagcacta
ggttggctgtatgaagagtatgcattgttgcaaggatttcagaggcgaactacattgtgt
acaaaaccacaggaagctccacatcaagcatataactttttattatgcaccttagtgtca
gctatcgatttagttcagggtaaagatcgcgatacattgttatccagattatatctggag
gcaccactaataactgaagatgctgtagaggccttaaaaatggtatcatctgatgaaatt
agaggtcttgcaccattgcagcttctgaaagaaatggtagtgcgtagaccaacaaaacaa
ctggtatttttaaatgtcttattatgccataccggacatgaaaacaatacaatacgggag
gctgcgatacaattagtctgtcagttgtacagcaggccagaattaagtaaattgattgag
gaatatgcagttctatatctaggctttttacgccttcataatccacctgaaattgttttt
gggcaagacagagggagaccgcaaattgagagccaatggactgaatcaactacacgtgct
tgtttaggtttatatcttgctcttcttagtgaacatcaagatcttattcacgagttagcg
agagtgtatacatcaatggcagcagatgtgaaacgtattgtattaagattagtggaaggg
ccagtaagatctttaggtatgggtagcccacaactgcttgcacttgttgaaaattgtcca
aaaggatccgaaactttagtcacaaggattatacatattcttacagagaaatctgctcca
agtacagagttagtagccagggtacgagagttatatcagactagagtctccgatgtcaga
tttttaatacctgtcctaaatggactcacaaaaaaagaagtgattgctgcacttccaaaa
ttgataaaattaaatcctattgtcgtaaaagaagtatttaatagattacttggaacacat
aacaatgatagtggtgtacctcatacatcgcctattacacctgcagaattattaatagct
ttacataatatagattcaagcaaggctgaattaaaaactgttatcaaagcaacttcgctt
tgctttgctgaaaaacaagcgtatacgcaggaaacggtcgcggttgtaatgcaacatctt
atggaaatgacacctctgccaacactactgatgcgcacagttatacagagtttggccctt
tatcccaggctaagcggatttgtcatgaacatacttcagcgtctgattctgaagcaagtg
tggaagcagccaaaagtatgggagggctttgtcaaatgttgcgaacgcacacaaccgcaa
agttttgccgttattctgcaattaccgccggcacaattggcagaggcgctccgaatggcc
agtaatttacgtgctcctttgctagcccatgttgaagcttttgccgagaatcagaaagca
cacattccacaatcgataatggatgtcatacagggtaaagtgctctgtgacatgcacgat
gagtttgatattgcaccacctgatgattattcgaatgatcaaaaaccagatacaatggaa
attgatctttcggaaccagctcctcccggtttagattag
DBGET
integrated database retrieval system
