KEGG   Polyergus mexicanus: 138938608
Entry
138938608         CDS       T10742                                 
Symbol
Sym
Name
(RefSeq) symplekin
  KO
K06100  symplekin
Organism
pmec  Polyergus mexicanus
Pathway
pmec03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:pmec00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    138938608 (Sym)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:pmec03021]
    138938608 (Sym)
   03019 Messenger RNA biogenesis [BR:pmec03019]
    138938608 (Sym)
Transcription machinery [BR:pmec03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Transcription termination factor
     138938608 (Sym)
Messenger RNA biogenesis [BR:pmec03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Cleavage stimulation factor (CSTF) complex
     138938608 (Sym)
    U7-dependent histone pre-mRNA processing factors
     138938608 (Sym)
SSDB
Motif
Pfam: Symplekin_C SYMPK_PTA1_N
Other DBs
NCBI-GeneID: 138938608
NCBI-ProteinID: XP_070161824
LinkDB
Position
Unknown
AA seq 1112 aa
MDPRLHRRSEPEKGSGDLIVEWINEASMNPSEEVKVANICKIQEFLLNKEPHLLELYLDD
VLQFSINRSAEVRKTITGFIEEAGIKQPEVIPRIVQILLTLASDETSAVAKRALRASGRI
LRAALKWIASATVVTPEMELAWTQLSALKVQIINMIDSDNDGIRTQAVKFLEGVILIQTY
PDPDNPKKLDDFSLEDIPLTLKIARRRKLEEEANHVMDLLIKFHGSPHVSSVNLMTCMGS
LALIAKMRPQFMPNVIQALQRLQHDLPPTLSDSQVTSVQKQLKLTLLGLIKHPASVEYAS
TIAKQLAQLGAKEQEIIKAYPKPEDIRRIKKRQQEVAAASAAKRAKIDVALISEEVEAAS
SLLPSFKLPELIELSESFIAERLSVEIATDLVMDSMAWVPDTMTTIFQREYQPTATTDIN
IQRQTIAKLLAAQIKQTKAKKHKKDTKEEDAVMEDLIKNPTISVAEAKRERKREKDREKE
KEAKASLEAHEKSLAKARNRLKALKLTEVTKPLSKETKERMLSMAVNRILLSEKTAVLGG
VAAIRSKILTTLAATFNPYIKEAVLRYITDDMRNRLDLALGWLYEEYALLQGFQRRTTLC
TKPQEAPHQAYNFLLCTLVSAIDLVQGKDRDTLLSRLYLEAPLITEDAVEALKMVSSDEI
RGLAPLQLLKEMVVRRPTKQLVFLNVLLCHTGHENNTIREAAIQLVCQLYSRPELSKLIE
EYAVLYLGFLRLHNPPEIVFGQDRGRPQIESQWTESTTRACLGLYLALLSEHQDLIHELA
RVYTSMAADVKRIVLRLVEGPVRSLGMGSPQLLALVENCPKGSETLVTRIIHILTEKSAP
STELVARVRELYQTRVSDVRFLIPVLNGLTKKEVIAALPKLIKLNPIVVKEVFNRLLGTH
NNDSGVPHTSPITPAELLIALHNIDSSKAELKTVIKATSLCFAEKQAYTQETVAVVMQHL
MEMTPLPTLLMRTVIQSLALYPRLSGFVMNILQRLILKQVWKQPKVWEGFVKCCERTQPQ
SFAVILQLPPAQLAEALRMASNLRAPLLAHVEAFAENQKAHIPQSIMDVIQGKVLCDMHD
EFDIAPPDDYSNDQKPDTMEIDLSEPAPPGLD
NT seq 3339 nt   +upstreamnt  +downstreamnt
atggatccacgtttgcatagaagatccgagccggaaaagggatcgggcgatttgattgtt
gaatggataaatgaggcttctatgaacccctctgaagaagttaaggtcgcaaatatatgt
aaaatacaggaatttttgttgaataaagaaccacatttgttagagctttacttggacgat
gttcttcaattttcgataaatagaagcgctgaagtcaggaaaactattacaggatttatc
gaagaagctggaataaaacaaccagaggtaatccctcgtatagttcaaatacttcttaca
ttagcatcggatgaaacatcagctgtggctaaacgtgcacttagagccagtggtagaatt
cttagagctgctctcaaatggattgctagcgctactgtcgttacaccagaaatggagttg
gcatggactcaactaagtgccctcaaagttcaaatcataaatatgattgacagtgataac
gatggaataagaacacaagctgtaaaattccttgaaggtgtaattctaatacagacatat
ccagatcctgacaatccaaagaaactggatgacttttctcttgaagatattccgctaaca
ctgaaaatagctcgtagacgaaaattagaagaagaagcaaatcatgttatggatttgttg
attaagtttcatggatctccacatgttagtagcgtcaatttaatgacatgcatgggatca
ttggcgttaattgctaaaatgagaccacagtttatgccaaatgtaattcaagctttacag
aggttgcaacatgatcttccaccaacactatctgattctcaagtaactagtgtacaaaaa
caattaaaacttacacttcttggattaataaaacatcctgctagtgtagaatatgcttca
accatagctaaacaattagctcaacttggagcaaaagagcaggaaattattaaggcctat
ccaaagccagaagatattcgtcgaataaaaaagcgtcaacaggaagtagcagctgctagt
gctgcaaaacgagcaaaaattgatgtggctctaatatccgaggaagtagaagcggcctca
agtcttcttccttcatttaaattaccagaattgattgaactttctgaaagttttattgct
gaaagactcagtgtagagattgcaacagatttagtgatggacagtatggcatgggtaccg
gatactatgacaacaattttccaaagggaatatcaacctactgcaactactgatattaat
atacaacgtcaaacaatcgccaaactgttagcggcgcaaatcaaacaaactaaagcaaaa
aagcacaaaaaagataccaaggaggaagatgctgtaatggaagatttaattaagaatccc
actattagcgtagctgaggcaaagcgtgaacgtaaacgcgaaaaagatcgcgaaaaggag
aaagaagcgaaagcatcattggaggctcatgaaaaatctcttgcaaaagctagaaatcgt
ttgaaggcattaaaattaactgaagtgacaaagccactttcaaaggaaactaaagagcga
atgttatcgatggcagtcaatcgaatattactttcagaaaagactgcagttctcggtggc
gtagctgctataagatctaaaattctgactactctggcagctacttttaatccttatatt
aaggaagctgtactgcgatatattaccgatgatatgcgaaatcgattagatctagcacta
ggttggctgtatgaagagtatgcattgttgcaaggatttcagaggcgaactacattgtgt
acaaaaccacaggaagctccacatcaagcatataactttttattatgcaccttagtgtca
gctatcgatttagttcagggtaaagatcgcgatacattgttatccagattatatctggag
gcaccactaataactgaagatgctgtagaggccttaaaaatggtatcatctgatgaaatt
agaggtcttgcaccattgcagcttctgaaagaaatggtagtgcgtagaccaacaaaacaa
ctggtatttttaaatgtcttattatgccataccggacatgaaaacaatacaatacgggag
gctgcgatacaattagtctgtcagttgtacagcaggccagaattaagtaaattgattgag
gaatatgcagttctatatctaggctttttacgccttcataatccacctgaaattgttttt
gggcaagacagagggagaccgcaaattgagagccaatggactgaatcaactacacgtgct
tgtttaggtttatatcttgctcttcttagtgaacatcaagatcttattcacgagttagcg
agagtgtatacatcaatggcagcagatgtgaaacgtattgtattaagattagtggaaggg
ccagtaagatctttaggtatgggtagcccacaactgcttgcacttgttgaaaattgtcca
aaaggatccgaaactttagtcacaaggattatacatattcttacagagaaatctgctcca
agtacagagttagtagccagggtacgagagttatatcagactagagtctccgatgtcaga
tttttaatacctgtcctaaatggactcacaaaaaaagaagtgattgctgcacttccaaaa
ttgataaaattaaatcctattgtcgtaaaagaagtatttaatagattacttggaacacat
aacaatgatagtggtgtacctcatacatcgcctattacacctgcagaattattaatagct
ttacataatatagattcaagcaaggctgaattaaaaactgttatcaaagcaacttcgctt
tgctttgctgaaaaacaagcgtatacgcaggaaacggtcgcggttgtaatgcaacatctt
atggaaatgacacctctgccaacactactgatgcgcacagttatacagagtttggccctt
tatcccaggctaagcggatttgtcatgaacatacttcagcgtctgattctgaagcaagtg
tggaagcagccaaaagtatgggagggctttgtcaaatgttgcgaacgcacacaaccgcaa
agttttgccgttattctgcaattaccgccggcacaattggcagaggcgctccgaatggcc
agtaatttacgtgctcctttgctagcccatgttgaagcttttgccgagaatcagaaagca
cacattccacaatcgataatggatgtcatacagggtaaagtgctctgtgacatgcacgat
gagtttgatattgcaccacctgatgattattcgaatgatcaaaaaccagatacaatggaa
attgatctttcggaaccagctcctcccggtttagattag

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