Entry |
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Symbol |
Sym
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Name |
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KO |
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Organism |
pmec Polyergus mexicanus
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Pathway |
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Brite |
KEGG Orthology (KO) [BR:pmec00001]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
138938608 (Sym)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:pmec03021]
138938608 (Sym)
03019 Messenger RNA biogenesis [BR:pmec03019]
138938608 (Sym)
Transcription machinery [BR:pmec03021]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
138938608 (Sym)
Messenger RNA biogenesis [BR:pmec03019]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
138938608 (Sym)
U7-dependent histone pre-mRNA processing factors
138938608 (Sym)
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SSDB |
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Motif |
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Other DBs |
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LinkDB |
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Position |
Unknown
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AA seq |
1112 aa
MDPRLHRRSEPEKGSGDLIVEWINEASMNPSEEVKVANICKIQEFLLNKEPHLLELYLDD
VLQFSINRSAEVRKTITGFIEEAGIKQPEVIPRIVQILLTLASDETSAVAKRALRASGRI
LRAALKWIASATVVTPEMELAWTQLSALKVQIINMIDSDNDGIRTQAVKFLEGVILIQTY
PDPDNPKKLDDFSLEDIPLTLKIARRRKLEEEANHVMDLLIKFHGSPHVSSVNLMTCMGS
LALIAKMRPQFMPNVIQALQRLQHDLPPTLSDSQVTSVQKQLKLTLLGLIKHPASVEYAS
TIAKQLAQLGAKEQEIIKAYPKPEDIRRIKKRQQEVAAASAAKRAKIDVALISEEVEAAS
SLLPSFKLPELIELSESFIAERLSVEIATDLVMDSMAWVPDTMTTIFQREYQPTATTDIN
IQRQTIAKLLAAQIKQTKAKKHKKDTKEEDAVMEDLIKNPTISVAEAKRERKREKDREKE
KEAKASLEAHEKSLAKARNRLKALKLTEVTKPLSKETKERMLSMAVNRILLSEKTAVLGG
VAAIRSKILTTLAATFNPYIKEAVLRYITDDMRNRLDLALGWLYEEYALLQGFQRRTTLC
TKPQEAPHQAYNFLLCTLVSAIDLVQGKDRDTLLSRLYLEAPLITEDAVEALKMVSSDEI
RGLAPLQLLKEMVVRRPTKQLVFLNVLLCHTGHENNTIREAAIQLVCQLYSRPELSKLIE
EYAVLYLGFLRLHNPPEIVFGQDRGRPQIESQWTESTTRACLGLYLALLSEHQDLIHELA
RVYTSMAADVKRIVLRLVEGPVRSLGMGSPQLLALVENCPKGSETLVTRIIHILTEKSAP
STELVARVRELYQTRVSDVRFLIPVLNGLTKKEVIAALPKLIKLNPIVVKEVFNRLLGTH
NNDSGVPHTSPITPAELLIALHNIDSSKAELKTVIKATSLCFAEKQAYTQETVAVVMQHL
MEMTPLPTLLMRTVIQSLALYPRLSGFVMNILQRLILKQVWKQPKVWEGFVKCCERTQPQ
SFAVILQLPPAQLAEALRMASNLRAPLLAHVEAFAENQKAHIPQSIMDVIQGKVLCDMHD
EFDIAPPDDYSNDQKPDTMEIDLSEPAPPGLD |
NT seq |
3339 nt +upstreamnt +downstreamnt
atggatccacgtttgcatagaagatccgagccggaaaagggatcgggcgatttgattgtt
gaatggataaatgaggcttctatgaacccctctgaagaagttaaggtcgcaaatatatgt
aaaatacaggaatttttgttgaataaagaaccacatttgttagagctttacttggacgat
gttcttcaattttcgataaatagaagcgctgaagtcaggaaaactattacaggatttatc
gaagaagctggaataaaacaaccagaggtaatccctcgtatagttcaaatacttcttaca
ttagcatcggatgaaacatcagctgtggctaaacgtgcacttagagccagtggtagaatt
cttagagctgctctcaaatggattgctagcgctactgtcgttacaccagaaatggagttg
gcatggactcaactaagtgccctcaaagttcaaatcataaatatgattgacagtgataac
gatggaataagaacacaagctgtaaaattccttgaaggtgtaattctaatacagacatat
ccagatcctgacaatccaaagaaactggatgacttttctcttgaagatattccgctaaca
ctgaaaatagctcgtagacgaaaattagaagaagaagcaaatcatgttatggatttgttg
attaagtttcatggatctccacatgttagtagcgtcaatttaatgacatgcatgggatca
ttggcgttaattgctaaaatgagaccacagtttatgccaaatgtaattcaagctttacag
aggttgcaacatgatcttccaccaacactatctgattctcaagtaactagtgtacaaaaa
caattaaaacttacacttcttggattaataaaacatcctgctagtgtagaatatgcttca
accatagctaaacaattagctcaacttggagcaaaagagcaggaaattattaaggcctat
ccaaagccagaagatattcgtcgaataaaaaagcgtcaacaggaagtagcagctgctagt
gctgcaaaacgagcaaaaattgatgtggctctaatatccgaggaagtagaagcggcctca
agtcttcttccttcatttaaattaccagaattgattgaactttctgaaagttttattgct
gaaagactcagtgtagagattgcaacagatttagtgatggacagtatggcatgggtaccg
gatactatgacaacaattttccaaagggaatatcaacctactgcaactactgatattaat
atacaacgtcaaacaatcgccaaactgttagcggcgcaaatcaaacaaactaaagcaaaa
aagcacaaaaaagataccaaggaggaagatgctgtaatggaagatttaattaagaatccc
actattagcgtagctgaggcaaagcgtgaacgtaaacgcgaaaaagatcgcgaaaaggag
aaagaagcgaaagcatcattggaggctcatgaaaaatctcttgcaaaagctagaaatcgt
ttgaaggcattaaaattaactgaagtgacaaagccactttcaaaggaaactaaagagcga
atgttatcgatggcagtcaatcgaatattactttcagaaaagactgcagttctcggtggc
gtagctgctataagatctaaaattctgactactctggcagctacttttaatccttatatt
aaggaagctgtactgcgatatattaccgatgatatgcgaaatcgattagatctagcacta
ggttggctgtatgaagagtatgcattgttgcaaggatttcagaggcgaactacattgtgt
acaaaaccacaggaagctccacatcaagcatataactttttattatgcaccttagtgtca
gctatcgatttagttcagggtaaagatcgcgatacattgttatccagattatatctggag
gcaccactaataactgaagatgctgtagaggccttaaaaatggtatcatctgatgaaatt
agaggtcttgcaccattgcagcttctgaaagaaatggtagtgcgtagaccaacaaaacaa
ctggtatttttaaatgtcttattatgccataccggacatgaaaacaatacaatacgggag
gctgcgatacaattagtctgtcagttgtacagcaggccagaattaagtaaattgattgag
gaatatgcagttctatatctaggctttttacgccttcataatccacctgaaattgttttt
gggcaagacagagggagaccgcaaattgagagccaatggactgaatcaactacacgtgct
tgtttaggtttatatcttgctcttcttagtgaacatcaagatcttattcacgagttagcg
agagtgtatacatcaatggcagcagatgtgaaacgtattgtattaagattagtggaaggg
ccagtaagatctttaggtatgggtagcccacaactgcttgcacttgttgaaaattgtcca
aaaggatccgaaactttagtcacaaggattatacatattcttacagagaaatctgctcca
agtacagagttagtagccagggtacgagagttatatcagactagagtctccgatgtcaga
tttttaatacctgtcctaaatggactcacaaaaaaagaagtgattgctgcacttccaaaa
ttgataaaattaaatcctattgtcgtaaaagaagtatttaatagattacttggaacacat
aacaatgatagtggtgtacctcatacatcgcctattacacctgcagaattattaatagct
ttacataatatagattcaagcaaggctgaattaaaaactgttatcaaagcaacttcgctt
tgctttgctgaaaaacaagcgtatacgcaggaaacggtcgcggttgtaatgcaacatctt
atggaaatgacacctctgccaacactactgatgcgcacagttatacagagtttggccctt
tatcccaggctaagcggatttgtcatgaacatacttcagcgtctgattctgaagcaagtg
tggaagcagccaaaagtatgggagggctttgtcaaatgttgcgaacgcacacaaccgcaa
agttttgccgttattctgcaattaccgccggcacaattggcagaggcgctccgaatggcc
agtaatttacgtgctcctttgctagcccatgttgaagcttttgccgagaatcagaaagca
cacattccacaatcgataatggatgtcatacagggtaaagtgctctgtgacatgcacgat
gagtttgatattgcaccacctgatgattattcgaatgatcaaaaaccagatacaatggaa
attgatctttcggaaccagctcctcccggtttagattag |