Polyergus mexicanus: 138938732
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Entry
138938732 CDS
T10742
Symbol
Trf2
Name
(RefSeq) TATA box-binding protein-like 1
KO
K03120
transcription initiation factor TFIID TATA-box-binding protein
Organism
pmec Polyergus mexicanus
Pathway
pmec03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
pmec00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
138938732 (Trf2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pmec03000
]
138938732 (Trf2)
03021 Transcription machinery [BR:
pmec03021
]
138938732 (Trf2)
Transcription factors [BR:
pmec03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
TATA-binding proteins
138938732 (Trf2)
Transcription machinery [BR:
pmec03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
138938732 (Trf2)
RNA polymerase III system
TFIIIB
138938732 (Trf2)
RNA polymerase I system
SL1/TIF-1B
138938732 (Trf2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TBP
T19C3_2_like
SCP1201-like
P22_Gp10_C
Motif
Other DBs
NCBI-GeneID:
138938732
NCBI-ProteinID:
XP_070162048
LinkDB
All DBs
Position
Unknown
AA seq
288 aa
AA seq
DB search
MATAIQENGMKPLTNKSLNHVEDVNNLDNAEEKDNRLFDGQLQPYMDHAEAHEEPPELDI
VINNVVCSFSVRCHLNLREIALNGSNVEYRRENGMITMKLRRPYTTASIWSSGKVTCTGA
TSEIQAKIAARRFARSLQKLGFKVRFNNYRVVNVLGTCCMPFAIKITSFSVYHKESADYE
PELHPGVTYKLKEPKATLKIFSTGSVTVTAPNVAAVQAAIEHIYPLVYEFRKERSPEDEL
ALTTKKRKLNSNKKKLDEFLEDEPDFSYESMVSDAEDAVDEDSDGSWD
NT seq
867 nt
NT seq
+upstream
nt +downstream
nt
atggcaactgctattcaagagaatggcatgaaaccattaaccaataaatcgttaaatcat
gtagaggatgttaataacttggacaatgcagaagaaaaggacaatagattgtttgatgga
caacttcaaccatatatggatcatgccgaagctcatgaagaacctcctgagcttgatatt
gttattaataatgtagtttgtagttttagtgtaaggtgtcatctaaacttgcgagaaata
gcacttaatggatccaatgttgaatacagaagagaaaatgggatgataacaatgaaatta
aggagaccatacactacagcatctatctggtcatctggcaaagtaacttgcactggtgca
accagtgaaattcaagcgaaaattgcagcacgtagattcgctcgttcccttcaaaaactt
ggattcaaagtaagatttaataactatagagtggtgaacgtattaggtacttgttgtatg
ccatttgcaatcaagataacatcattttcggtgtatcacaaagagagtgcagattacgag
ccagaattacatcctggtgttacatataagctaaaggaaccaaaagctactttgaagata
ttttctacgggaagtgtcactgtaacagcacctaatgttgctgcagttcaagcggcaatt
gaacatatttatccactagtctatgagtttcgcaaggagcgatcaccagaggacgaactt
gcgttaacaacgaaaaaacgcaagttaaactcgaataaaaagaaattggacgaattctta
gaagatgaaccggatttttcatatgaaagtatggtttccgatgcagaagatgcggtcgac
gaagatagtgatggaagttgggactga
DBGET
integrated database retrieval system