Polyergus mexicanus: 138938892
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Entry
138938892 CDS
T10742
Name
(RefSeq) nuclear pore complex protein DDB_G0274915 isoform X1
KO
K18716
nucleoporin NUP42
Organism
pmec Polyergus mexicanus
Brite
KEGG Orthology (KO) [BR:
pmec00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pmec03019
]
138938892
Messenger RNA biogenesis [BR:
pmec03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
138938892
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-CCCH_4
zf-CCCH
zf_CCCH_4
Torus
zf-CCCH_2
Nucleoporin_FG
Motif
Other DBs
NCBI-GeneID:
138938892
NCBI-ProteinID:
XP_070162360
LinkDB
All DBs
Position
Unknown
AA seq
638 aa
AA seq
DB search
MVICKYYRQGNCRYGQYCQFEHINNFAGNTKTDHNEDDIAVTVAKEVLLAERGGQWLLSC
FGPFRDRPIIPGMEDLSPEEVRCEIYEAQKNGIVEQAKLNFQRLCQDMKAKREALKNPTR
ETIAMLKKILGSSQKAPHLGLVNTNTSTNNVFGNKTFGVQNNNPFGGGGFTSSNNTSSIF
GKTNNNSTSVFGSTATFGNNLGRFATATNTNSFFGGTTNTSTSFNSIQNNTSTFGTSQNN
PIFGGPSQTVFGQNNNVFGTTSQFGNASSTSLFNNPMTSQANTCLFGGATTTTPNLFGDS
SSSGLQTNSVFGASTTSSGSSFNGGIFNQPKTQIPAFGGTPVFGGVTSNYASNPNGNSIF
SVNQTFGATTAIPTSGIFGGSTAVATPAFGVSASTTTPVFGAPIATTTSAFGTSVTTTPA
FNLNQQHGNNTFGTTASAPNVFGGTQNTDATMSVGNGNGPFGTSITAGPFVTVNSQQYDS
TGASSTPFAGTGFGIAVANSTFSTTETSSNSIFANAGTTFATCNGTIPNPSFPTSTFGNI
KVSSSTSSTALTTTTNPFAPRMQQGGTPFGNVQQTQSGTIALSSPFVKSPFNTTANTVID
DTVYSMEGTLTDDEKSMYLAEKFIIGKIPLKPPTKDIR
NT seq
1917 nt
NT seq
+upstream
nt +downstream
nt
atggttatctgcaaatattatcggcaaggcaattgccgttatgggcaatattgtcaattc
gaacatataaataattttgcaggcaataccaaaactgaccataatgaggatgatattgct
gtcacagtagccaaagaggtacttcttgctgagagaggtggacaatggttattatcatgt
tttggaccattcagagaccgtcccattataccaggcatggaggatttatctccagaagag
gttcgatgtgagatatatgaggcacaaaaaaacggcatagttgaacaagcaaaactaaat
ttccaacgattgtgccaagatatgaaggcgaaaagagaagcactgaagaatcccactcga
gagacaatcgcaatgttgaaaaagatcttgggaagcagccaaaaagctcctcatttgggc
ctagtcaatactaatacatcgactaataatgtgtttggaaataaaacattcggtgtgcaa
aataataatccatttggaggaggaggattcacttcctcaaataatacatcgtcaatattc
ggaaaaactaataataattcaacgtcagtgtttggtagtacggcgacctttgggaataac
ctcggtagattcgctaccgcgacgaataccaattccttcttcggtggaacaaccaacacc
tcgacatcgttcaacagtatacagaataatacgtccacgttcgggacatctcagaataat
ccaatttttggcggaccgtctcaaaccgtatttggccaaaataataatgtgttcggtact
acgagtcagttcggcaacgcatcttccacttcgctgttcaacaatccgatgacttcgcaa
gcaaacacttgtctatttggcggagcgaccaccactacgcccaacttattcggtgactcg
tcatcatccggcttacagacaaattcggttttcggagcttctaccacctcgtccggctca
tcttttaacggcggtatatttaatcagccgaaaacgcagattcctgcgtttggcgggacg
ccagttttcggcggggtaacttccaattatgccagtaatcccaacggcaattccatcttc
agcgtcaaccaaacattcggcgctaccacggcgatacccacgagcggtatctttggcgga
tccactgccgtcgcgacaccagctttcggtgtatctgcctctacgacaacgccggttttc
ggtgcgcccatcgccaccacaacgtcagctttcggtacgtctgttactacaacgccggcc
tttaatctaaaccaacagcatggtaataatacttttggaacgaccgcatctgccccgaat
gtctttggtgggacgcaaaatactgatgccaccatgtcagtaggaaacggtaatggaccg
ttcggaacatcgatcaccgctggtccgttcgttaccgttaattcgcagcaatatgattct
acgggcgcgagttcaacgccgtttgccggcacgggattcggcatagctgtcgcgaacagt
acattcagcaccacagaaacgtcttccaattcgatattcgcgaatgcgggaactactttc
gcaacctgcaacggaacaattccgaatccttcgtttcccacgtcgacgttcggcaatatt
aaggtttcctcgtcgactagcagcacagctctcactacaactacaaatccatttgcaccg
cgaatgcaacaaggcggtacgccgttcggaaacgtacaacaaactcaatccggtactatc
gccctctcatctccattcgtaaaatcgccgtttaacacaactgccaacactgtcatcgac
gatactgtttacagcatggaaggtacattaacggatgacgaaaaaagcatgtatttggct
gagaaatttattatcggtaaaataccactcaaacctcctaccaaagatataaggtaa
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