Polyergus mexicanus: 138938908
Help
Entry
138938908 CDS
T10742
Name
(RefSeq) uncharacterized protein
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
pmec Polyergus mexicanus
Pathway
pmec03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pmec00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
138938908
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pmec03041
]
138938908
03009 Ribosome biogenesis [BR:
pmec03009
]
138938908
Enzymes [BR:
pmec01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
138938908
Spliceosome [BR:
pmec03041
]
Complex A
U1 snRNP components
U1 related factors
138938908
Complex B
138938908
Ribosome biogenesis [BR:
pmec03009
]
Eukaryotic type
Pre-60S particles
Helicases
138938908
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_30
Cas3-like_C_2
ERCC3_RAD25_C
tRNA_NucTran2_2
Motif
Other DBs
NCBI-GeneID:
138938908
NCBI-ProteinID:
XP_070162412
LinkDB
All DBs
Position
Unknown
AA seq
616 aa
AA seq
DB search
MFSRDRDQGRGRRGGTIRTGTSRGGSDNGRGHIVSRFATLGRGSASNIRGGLKGKQPGSG
LRKVNWDLRTLEPLRKDFYIEHPAVRNRSNEEVSQFRENAEITVKGENVPNPIQYFEEGN
FPPYVMEGIRRQGYSQPTPIQAQGWPIALSGRDLVAIAQTGSGKTLGYILPAIVHIIHQP
RLSNGDGPIVLVLAPTRELAQQIQEVANCFGETAAVRNTCIFGGAPKGPQAHDLERGIEI
CIATPGRLIDFLERGTTNLRRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQVLMWSA
TWPKEVRALAEDFLTDYVHLNIGSLTLSANHNITQIIDVCHEYEKDSKLYRLLQEIGTEK
ENKTIIFVETKRKVDDITRNIRRDGWQAVSIHGDKNQQERDHVLQEFRSGRAPILVATDV
AARGLDVDDVKYVINFDYPSSSEDYIHRIGRTGRRRQTGTAYAFFTSHNMKHAGDLIEVL
REAGQNVNPRLSEMAEMAKAGNFSGRGAKRFGTSGGNGTERGNGRRGNNDGRGRGGTSTR
GRGPTRGGSSYQSSSSVYSGSDYNNYSSMKQSSSLDQQSTAYGYSTQRSYGQGSMPQNYG
GGDNYGSGYPYRGTTY
NT seq
1851 nt
NT seq
+upstream
nt +downstream
nt
atgtttagtcgtgatcgagatcagggtaggggccgccgaggtggcactatcaggacaggt
actagcagaggaggcagcgataatggacgtggacatattgttagcagatttgctacactt
ggtagaggaagcgctagtaatatacgaggtggattaaagggaaagcaacctggtagtggt
ttaaggaaagtaaactgggatcttcgtactttggaaccactacgcaaagatttttatata
gagcatcctgcagtcagaaatagatctaatgaagaagtaagtcaatttcgcgagaatgca
gaaataactgtaaagggcgaaaatgttcctaatcctatacaatattttgaggagggaaat
tttccaccctatgtaatggagggtattcgtagacaaggatattcacaacctactccaatt
caagcacaaggatggcctattgcccttagtggtagagatcttgttgcaattgctcaaacc
ggttctggaaagacacttggatacattttacctgcaattgtgcatatcatacatcaacca
cgcttaagtaatggagatggtccaattgtcttagtcttagctccaactagagaattagct
caacaaattcaagaagtagctaattgctttggagaaactgcagccgtaagaaacacatgt
atttttggtggtgcaccaaaaggaccgcaagcacatgatttggagagaggcattgagata
tgcattgctactccaggtagacttatagatttcttagaaagagggactacaaatttacgt
agatgtacatatctagtacttgatgaagcagatcgtatgctagacatgggattcgaacca
cagatacgaaaaataattgagcagatacgtcctgacagacaagttttaatgtggtcagcg
acatggcctaaagaagttcgcgcccttgccgaggatttcctaacggactatgttcatctc
aatatcggctctttgaccctatcagccaatcacaacatcactcagatcattgatgtttgt
cacgagtatgagaaagactcgaaattgtatagattacttcaagagatcggtactgaaaaa
gagaataaaaccattatatttgtggaaaccaaacgtaaagtggatgatatcacgagaaac
attagacgcgacggatggcaagccgtgagtattcacggtgataaaaatcagcaggaaaga
gatcatgtgttacaagaattccgaagtggaagagcaccgattttagttgcgaccgatgta
gctgctagaggtttagacgtggatgatgtgaaatacgtgataaatttcgattacccatcc
tcatcggaggactacatacacagaatcggtcgaaccgggcgtagacgacagaccggaaca
gcgtacgcgtttttcacgagccacaatatgaagcacgccggagacttgatagaggtgtta
cgagaagccggacaaaatgtcaatccgcgtctcagtgaaatggcggaaatggccaaggcg
ggaaacttcagtggcagaggtgcaaaacgttttggcacttctggtggtaatggcactgag
aggggtaatggtcgaagaggcaataatgatggtagaggaagaggaggtacttcgacaaga
ggaagaggtcctactcgcggtggaagttcttatcaatcttcttcgagtgtttattcagga
tccgattacaataattatagtagtatgaaacaaagttcttctttggatcagcaaagcacg
gcatatggatatagcacgcagagaagctatggacagggaagtatgcctcaaaattacggg
ggcggcgataactatggaagtggttatccatacagaggcacaacttattaa
DBGET
integrated database retrieval system
