Polyergus mexicanus: 138938909
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Entry
138938909 CDS
T10742
Name
(RefSeq) uncharacterized protein
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
pmec Polyergus mexicanus
Pathway
pmec03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pmec00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
138938909
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pmec03041
]
138938909
03009 Ribosome biogenesis [BR:
pmec03009
]
138938909
Enzymes [BR:
pmec01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
138938909
Spliceosome [BR:
pmec03041
]
Complex A
U1 snRNP components
U1 related factors
138938909
Complex B
138938909
Ribosome biogenesis [BR:
pmec03009
]
Eukaryotic type
Pre-60S particles
Helicases
138938909
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
ERCC3_RAD25_C
Cas3-like_C_2
PRAI
Motif
Other DBs
NCBI-GeneID:
138938909
NCBI-ProteinID:
XP_070162413
LinkDB
All DBs
Position
Unknown
AA seq
607 aa
AA seq
DB search
MAYGERERSDRRGGARGGGSRFGGRDSGGGGSRFSSGGNRDSNFGNNNFKNRQPGERLRK
PRWDMSSLPQFRKDFYQPHPNVVGRNVHAVESYRSGKEITVKGANVPCPNIFFEEGGFPD
YVLNEIRRQGFGEPTAIQAQGWPIALSGRDMVGIAQTGSGKTLAYILPAIVHINNQPRLS
RNDGPIALILAPTRELAQQIQQVASDFGTSSQVRNTCIFGGAPKGPQARDLERGVEICIA
TPGRLIDFLERGTTNLRRCTYLVLDEADRMLDMGFEPQIRKIVEQIRPDRQTLMWSATWP
KEVRNLAEEFLTDYIQINIGSLQLAANHNILQIVDVCEEYEKESKLMKLLEEISNEPENK
TIIFVETKRKVDDITRAINRYGWQAIGIHGDKSQQERDYVLNQFRNSRSAILVATDVAAR
GLDVEDVKFVINLDYPSNSEDYVHRIGRTGRSQRTGTAYAFFTPGNAHKASDLIQVLEEA
KQVVNPKLYELARNPGVYKRGRYGGRSGGGGGGRGSGGRGGGSRGSRGGRDAGDRGRFDR
SSGGGASDRANKWAGSSSGGMGGTSYGNSKSFPQNNFGSGTSGGGSSSYSQNNSGYGGGS
YRQQNGY
NT seq
1824 nt
NT seq
+upstream
nt +downstream
nt
atggcatacggtgaacgcgaacgttccgataggcgaggtggtgcacgcggtggtggcagt
cgatttggtggacgcgatagtggcggaggaggcagtagattcagcagcggtgggaatcga
gatagcaatttcggaaataacaactttaagaatcgacagcccggggagcgtttgcgtaaa
ccgagatgggatatgagcagcttgccacaatttagaaaggatttttatcaaccgcatccc
aatgtagtaggacgaaatgttcatgcggttgagtcttaccgttccggtaaagagatcacc
gtaaagggggccaacgtaccatgtcccaatatttttttcgaggaaggtggcttcccggat
tatgttctcaacgagattcgtcgacagggattcggcgaaccgactgctattcaggcgcaa
ggttggcccattgctctatcaggtcgcgatatggtcggtatagcgcaaactggttcggga
aaaacgctagcgtatattttaccagccatcgtgcatataaataatcagcctagactaagc
agaaacgatggaccaatcgccctgatcttagcaccaactcgagaattggcgcagcaaatt
caacaagtagcgtcagactttggcacgtcttcgcaggtgcgaaatacatgcatctttggt
ggcgctccgaaaggtccacaggcacgcgatttagaacgtggtgtagaaatttgcatcgcc
acaccaggtcgtcttatagatttcttagaacggggtaccacaaatctgcgtagatgtact
tatctagtgctcgacgaggctgataggatgctagatatgggctttgagccacaaattaga
aaaattgtagaacaaatacgtcccgaccgtcagactctcatgtggtcggcaacgtggccg
aaggaagtgcgtaatctcgcagaggagttcttaacggactatatacagattaacattggc
tctctacaattggctgccaatcataatattttgcaaattgtggatgtgtgcgaggaatat
gagaaggagagtaaacttatgaaacttttggaagaaatttcaaatgaaccggaaaataaa
actataatatttgtggaaaccaagaggaaagtggatgatataacaagggccattaataga
tacggatggcaagcaattggcattcacggagacaaaagccaacaagaaagagattatgta
ctaaatcagttccggaatagcaggtctgccatcctagtggctacagatgtggcggcgaga
ggtttagatgtcgaggatgtcaaatttgtgataaacttggactatccgtccaactctgag
gattatgtgcaccgtatcggacgtacgggtcggtcgcagcgtacaggaaccgcgtacgcc
tttttcacacccggcaatgcgcacaaggctagtgacttaatccaagttctagaagaagct
aagcaagttgtcaatccgaaattatacgagttagccagaaatcctggtgtttataagaga
ggacgatatggtggacgcagcggaggtggtggcggtggacgagggtctgggggccgcggt
ggcggctcgcgaggatctcgcggaggtcgcgatgcgggagatagaggaagatttgatcgt
tcttctggtggcggtgcaagtgatcgtgctaacaaatgggccggaagcagtagtggtggc
atgggcggaactagctatggaaacagtaaatcgtttccccaaaataatttcgggagtgga
acttcgggcggtggttccagcagctacagccaaaacaatagcggatatggcggaggaagt
tataggcaacaaaatggctattga
DBGET
integrated database retrieval system
