Polyergus mexicanus: 138939030
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Entry
138939030 CDS
T10742
Symbol
Dcr-2
Name
(RefSeq) endoribonuclease Dicer isoform X1
KO
K11592
endoribonuclease Dicer [EC:3.1.26.-]
Organism
pmec Polyergus mexicanus
Brite
KEGG Orthology (KO) [BR:
pmec00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pmec03036
]
138939030 (Dcr-2)
Chromosome and associated proteins [BR:
pmec03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
138939030 (Dcr-2)
microRNA pathway
RISC loading complex
138939030 (Dcr-2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ribonuclease_3
Ribonucleas_3_3
Dicer_dimer
Dicer_platform
DEAD
ResIII
PAZ
Helicase_C
Dicer_dsRBD
Motif
Other DBs
NCBI-GeneID:
138939030
NCBI-ProteinID:
XP_070162589
LinkDB
All DBs
Position
Unknown
AA seq
1613 aa
AA seq
DB search
MNSYDTMEPKLTSNETEFNPRAYQIDLYEKAVQNNTILYLPTGAGKTYIAVMLLKHFSAD
IRKPYSQGGKRTMFAVNTVALVSQQSEYISRHTDLICKGYSGDMHVDFWEEEQWLAEIEA
NQVLVMTSQIFLDILSHGFMRLEKVNLIVFDECHRAVCNHPMRQIMQRFEDYPKDRQPRI
LAMSATLLNANIKLDKIESTIRSLEITFQSKIATVESTDCIQGYCTNPKENIIMYMKYQT
SEVIVKITQIIENASEVLKNTNLNLDDLYKESSPQLRPKTKSSKLITIMKDIEITTLQAG
IYGGSKSALLHLIQLESLRKYSTDLVMDMVLDYMITQVIMIRKLFDNEMKGYTELEQLRN
FSSDQICKLFEILTKCNDKLLTNQKFCCIIFVKERFMTQVIYHILKTLSKLDKQYNFLLP
DYVTGFQNNPYKHSREITCIAKWNKEVLHRFKTGSSNCIVATDVVDEGIDVPNCTLIIRY
DMPMDFRSYVQSKGRARHSSSQYMVLMPKDDIAFLRRYENYKNTESILKMSLVGQSELRT
LPTDSDISSCLYVSEIEPYVVKQNDTESCITEVSAINIINIYCNTLMNSKFVRLVPIWKL
DKKESCDGMLFKISLKLPSISPLKVEVHGDFMKSIDSAKRSAAMKTCIKLHKLGALTDKL
LPATGNAVLQNLNCLFPNWIDEDYLPGTYKRKRGHRLEHPMTLYSAFPKSLEILHLHILN
CTPTYPMTSYDNRRIIFYKLLNDKNGFGILSTKIMPKIPSFPIFMKDGQLDVDVKINYAT
MMLSETDIESLKRFHFLLFNEILSVIKSFMLFDNDNLENSFLIVPLNDKEEINWDVVRTY
QHVDRIMPSKPFHFKTSDYELALVTPTYRGSANVYIVTRVCDDLTPESCFPNEDFDTFTH
YYKEKHNLTIENLQQSMLEVKPIPMKINYIKPRKLHDGSVKYKKTDDTVEDLQEHLIPEL
CWKINFPALYWLKATTLPSILHRISQLLIAEDLRVVIARETNLGSLTLEKWSPLTLEKDS
VKLLEEEPKNESDLMMDDIVERRQSDLNIFELSDCSPSNDKEPQDLYRNMEQVQMIDIQY
YNHFISTNCDDSIQKNTNKGHIDRRCMRSTVSVPSLNILVSSEKLFLSHGPNVVEIMHAL
TTQLGTDMFNLERLETLGDSYLKFITSLFLYHKFPIFNEGQLTALKGKIIGNRNLYYCGN
KKNIPGRIKNDAFIPTSNFIAPAYTVLRPLQNKLLNESVAPNVLYELRIPEEEKFTGLIS
ENTLAMIQRTVTNWDKEDTQTGYEHYLGVQILSDKTVADSVEALIGVYLRSNGIKGAAKL
LKWFGILPDIQIEELLYGDPLDPLIDSGNPNKYMPWADAMETKIGYKFNNRAFMLQAFTH
PSYTPNGITECYQRLEFLGDAILDFLITCYIYENCGNLSPGDLTDLRSALVNNITFACVA
VRYALDTALLSYAPKLHEAIDRFVKFQQERNYVVNDELLWVLLEEEECNLAEYVDVPKVL
GDLFESLIGAIYLDSGKNLTKVWEIVYSFMHKEIDKFSKDTPKHPVRLIHENKDARPKFL
DAVLIEGTDIIMVPLKATIAGKEKLFHGFGANKKQAKCAAAKQRQKSLTIDCI
NT seq
4842 nt
NT seq
+upstream
nt +downstream
nt
atgaattcatatgatacaatggagcccaaattgacatcaaacgagactgaatttaaccca
agggcatatcaaatagatctctatgaaaaagcggtgcaaaataataccattctttacttg
ccaactggtgcaggcaagacatatatagctgttatgcttttaaaacattttagtgctgat
atacgcaagccttatagccaaggtggaaagcgtactatgtttgccgtaaatacagtagca
ttggtatcgcaacaatcggaatatataagcagacatacagatttaatatgtaaaggttat
agtggagatatgcatgtggacttttgggaggaagaacagtggttggctgaaatagaagca
aaccaagttttggtaatgacgtcacaaatttttttggatatactctcacatggattcatg
agattagaaaaagtaaatttaattgtgtttgatgaatgccacagagcagtctgtaatcac
cccatgagacagattatgcaacgatttgaagactatcctaaagacaggcaaccacgtatt
ttagctatgtctgcaacattattgaatgctaatataaaattggataaaattgaatcaaca
atcaggtctttagagataacattccagtcaaagatagcgactgtagaatcaacagactgt
atccaaggatattgtacaaatccaaaggaaaatattatcatgtacatgaaatatcaaact
tctgaagtaattgtaaagataactcaaataatagagaacgcttcagaagtattgaaaaat
acaaatttgaatttggatgatttatataaggaatccagtccacaactgcggcctaaaaca
aaatcttctaaactaataactattatgaaagacatagaaataactactttgcaggcaggt
atatatggcggtagtaagtcagctttgttacacttaatccagctagaaagtttaagaaaa
tactccactgacttggtaatggatatggttctggattatatgattacgcaagtaattatg
ataagaaagttgtttgacaatgagatgaaaggttatacggaattagaacagctacgcaac
ttttcatccgatcaaatttgcaaattatttgagatattaacaaaatgtaacgataaacta
ttaaccaatcaaaagttctgctgcattatttttgtgaaggagagatttatgacacaagtg
atatatcatatattaaaaacgctatcgaaactcgataaacaatacaattttcttttgccc
gattatgtaaccggatttcagaataatccttacaaacatagtagagaaattacatgtatt
gcaaagtggaataaggaagtattacatagatttaaaactggttcttcaaattgcattgta
gcgactgatgttgttgatgaaggtatcgatgtaccaaattgcacattgataatacgatat
gatatgccgatggatttcagaagttacgttcaaagtaagggtcgagcacgtcacagttca
agtcaatacatggtcttaatgccgaaagacgatatcgcttttcttcgaagatatgaaaat
tacaaaaatacagaatcaatattaaaaatgagtttggtggggcaaagtgaactacgcaca
cttcctactgatagcgatatttcaagctgtctatatgtaagtgaaattgaaccatatgta
gtgaaacaaaatgatactgaaagttgtataacagaggtatctgcgatcaatataataaat
atatattgcaatactctaatgaattccaagttcgtccgtctggtgcccatttggaaatta
gataaaaaggaaagttgtgatgggatgttatttaagatttcccttaaactaccaagtata
tcgccactgaaagtcgaagttcacggcgattttatgaaaagtatagatagcgctaaacga
tctgctgctatgaagacttgcataaaattgcacaagctaggtgcattgacagacaaatta
ttacctgcaaccggaaacgcagtcctacaaaatttgaattgtttgtttccaaattggata
gatgaagattatttgcctggcacatataaacgaaagcgaggacataggctagagcatcca
atgacattgtacagcgcattcccgaaatctttagagatattgcatcttcatattcttaat
tgtactcctacgtatcctatgacaagttatgataatagacgtataattttttataaatta
ctgaatgacaagaatggctttggtatcctttccactaagattatgccaaagataccttcc
tttccgatttttatgaaagacggtcaattagatgttgatgtaaaaatcaattatgcaaca
atgatgctaagcgaaaccgatattgaatccctcaaaagatttcattttctattgttcaat
gaaattttatctgttattaagagctttatgctctttgataacgacaatcttgaaaattcc
tttctaattgttccattgaatgacaaagaagaaataaattgggatgttgtgagaacgtat
caacatgtagatcgaattatgccatctaagccttttcacttcaagactagcgattatgaa
ttggcattagtcactccaacttatagaggctcagcaaatgtctacatagttacgcgagta
tgtgatgaccttacgcctgaatcgtgcttccctaatgaagatttcgacacgttcacgcat
tattataaagaaaaacataatttaactatagaaaatctgcaacaatcgatgttggaagtg
aaaccaataccaatgaagattaactacataaaaccgaggaaattgcatgatggatcagtg
aaatataagaaaacggatgacacagtggaagatcttcaggaacacttgatcccagaacta
tgttggaagataaactttccggctctctactggttaaaagcgaccacattgccttccatt
cttcacagaatttctcaactcttgatcgcagaagacttgagagtagttatcgcaagagag
actaatttaggatctttaacattagaaaaatggtctcctttaacattggaaaaagatagt
gtgaaattgttagaggaggagcctaaaaatgaatcagatctaatgatggacgatatagtc
gaaagaaggcaatcggatctaaacatatttgaattgagcgattgtagtccctcgaatgac
aaagaacctcaagatttatatcgtaatatggaacaagtccaaatgattgatattcaatat
tataatcattttatatctacaaattgtgatgatagtattcagaaaaatacgaacaagggc
catatcgatcgtcgctgtatgagatcgacggtatcagtgccatcattgaatattcttgtg
tcatctgagaaactttttctttcacatggtcctaatgtggtagaaatcatgcatgcactg
actactcaattaggtacggatatgtttaacttggagcgattggagactctaggcgattct
tacttgaagtttattacatcgttgtttttatatcacaaattcccgatatttaacgagggc
caattaacggcgttgaaggggaaaatcatcggtaatcggaatctgtattattgtggcaat
aagaagaatattcctggacgcataaagaacgacgcatttatacctacgagtaatttcatc
gcgcctgcgtatacagtattacgtccattacaaaacaaattgttgaacgagtcggtggcg
ccaaatgtattatacgaactgcgaataccggaagaggagaaattcactggacttataagc
gaaaatacattagctatgatacagcggacggtgacaaactgggacaaggaagacacgcaa
actggatatgaacattatctcggtgttcaaattttatccgataaaaccgtagcggattcg
gtagaagcgctgattggtgtttatctcaggagcaacggtataaaaggcgccgcaaaactg
ctcaaatggttcggtatattgccggatattcagatcgaagaattactgtacggtgatcca
ctggatcctttaatagattcggggaatccaaacaaatacatgccatgggccgatgctatg
gaaaccaagatcggctataaatttaacaaccgagcgtttatgttgcaggcgttcactcat
ccatcctacacaccaaatggaataaccgagtgttatcaaagattagaatttctaggagat
gctattttagattttttgattacgtgttacatttatgaaaattgtgggaacttgagtcct
ggtgatcttactgatctgagatctgcccttgtcaacaatataacattcgcttgtgtggca
gtacgatatgctttagacaccgctttactgtcttacgctccaaaattacacgaagcaatc
gaccgctttgtaaagttccaacaagaacgaaattatgtagttaacgatgagttgctgtgg
gtattacttgaagaggaggaatgtaacctggcagaatatgttgatgttccaaaagttctt
ggagatttattcgaatctttgatcggagccatctatcttgatagtggcaagaatcttaca
aaagtttgggagattgtatattcctttatgcataaggaaattgataaatttagcaaagac
acacctaaacatccagtacgactaatacatgaaaataaagatgcacgtcccaaatttctg
gatgctgtattgattgaaggtacagatataatcatggtacctttgaaagcaactattgca
ggtaaagagaaactcttccatggttttggagctaataaaaagcaggctaaatgtgctgcc
gcaaaacagaggcagaaaagcttaaccatagattgcatataa
DBGET
integrated database retrieval system
