Polyergus mexicanus: 138939292
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Entry
138939292 CDS
T10742
Name
(RefSeq) pre-mRNA-splicing factor RBM22
KO
K12872
pre-mRNA-splicing factor RBM22/SLT11
Organism
pmec Polyergus mexicanus
Pathway
pmec03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pmec00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
138939292
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pmec03041
]
138939292
Spliceosome [BR:
pmec03041
]
Complex B
Other components
Prp19-related factors
138939292
Complex C
138939292
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
STL11_N
zf-CCCH_RBM22
RRM_1
zf_CCCH_4
RRM_occluded
Torus
RRM_YTH1
zf-CCCH_2
zf-CCCH
zf-CCCH_4
Nup35_RRM_2
zf-CCCH_10
RRM_3
zf-CCCH_12
DUF5092
zf-CCCH_PARP12
Motif
Other DBs
NCBI-GeneID:
138939292
NCBI-ProteinID:
XP_070163051
LinkDB
All DBs
Position
Unknown
AA seq
411 aa
AA seq
DB search
MATSKTTNTYNRQNWEDAEFPILCQTCLGDNPYIRMTKEKYGKECKICMRPFTVFRWCPG
ARMRFKKTEVCQTCSRLKNVCQTCLLDLEYGLPIQVRDAALKIKDDLPRSDVNKEYYVQN
IDNEIGKIDPTTPAGAVGKSAAASDLLMKLARTSPYYKRNRPHICSFWVKGECKRGEECP
YRHEKPTDPDDPLADQNIKDRYYGVNDPVADKLMRRAAAMPKLDPPEDKSITTLYIGNLG
DVLTEKQLRDHFYQYGEIRSVTMVPRQQCAFIQYTQRSAAEAAAERTFNKLILGGRRLTI
KWGRSQGRQTISATEAMREILEPVPGLPGALPPPPETMGNNFFNLQTTPGMIPPMMIPPP
PVAPQFMFPPQMAAAAATPIFPPGTTPIHYPSQDPSRMGASQGIGKPWPEE
NT seq
1236 nt
NT seq
+upstream
nt +downstream
nt
atggctacatcaaaaactaccaatacatataatagacaaaattgggaagatgcggaattt
ccaatactatgtcaaacatgtttaggagataatccatatatccgtatgacgaaggaaaaa
tatggaaaggaatgcaagatatgtatgcgaccatttacagtatttagatggtgtcccggg
gcaaggatgcgatttaagaaaactgaagtctgtcaaacatgtagtagattgaaaaatgtt
tgtcaaacatgtttattagatttggaatatggtctacctattcaagttcgcgacgctgct
ttgaagattaaggatgatttgccacgttcagatgtaaacaaggaatattatgtacagaat
atagacaatgagattggaaaaatcgatccaacaacaccagctggtgctgtcggcaaatct
gcagcagctagcgatctcttaatgaaattggctagaacgagtccatactataagaggaac
agaccgcacatttgttcattttgggtgaaaggcgagtgcaagaggggtgaggagtgtcct
tatcggcatgagaagccgacagaccccgatgatccattagctgatcagaatataaaggat
cgttattatggtgtgaatgatccagtggcagataaacttatgcgaagggcagcagctatg
cccaagctcgatccgcctgaagataaatctatcacgacattgtatatcggtaatttaggt
gatgtattgacagagaaacaattgcgcgatcatttctatcaatatggcgagatacgttcg
gtgaccatggtgccacgtcaacaatgtgccttcatccaatacacgcagagaagcgctgcc
gaggcagcggcagaaagaacgttcaacaagttgatattgggtggaaggcgacttactata
aaatggggccgttctcagggaaggcaaacgatatctgcaacagaagcaatgagagaaatt
cttgaacctgttccgggattacctggagcattaccaccgccaccagaaactatgggcaac
aattttttcaacctacagaccacgcctggcatgataccgccgatgatgattccaccaccg
cctgttgcacctcaatttatgtttccaccacaaatggcggctgcagctgcgacaccgatt
ttccctccaggaacaacacctatacattatccaagccaagatccatccagaatgggcgcg
tcacagggtataggcaaaccttggccggaagaatag
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