Polyergus mexicanus: 138939380
Help
Entry
138939380 CDS
T10742
Name
(RefSeq) retinol dehydrogenase 13 isoform X1
KO
K04506
E3 ubiquitin-protein ligase SIAH1 [EC:
2.3.2.27
]
Organism
pmec Polyergus mexicanus
Pathway
pmec04013
MAPK signaling pathway - fly
pmec04120
Ubiquitin mediated proteolysis
pmec04137
Mitophagy - animal
pmec04310
Wnt signaling pathway
Brite
Enzymes [BR:
pmec01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
138939380
Ubiquitin system [BR:
pmec04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
138939380
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
adh_short
Sina_ZnF
adh_short_C2
Sina_TRAF
Sina_RING
KR
Epimerase
FakA-like_C
Motif
Other DBs
NCBI-GeneID:
138939380
NCBI-ProteinID:
XP_070163193
LinkDB
All DBs
Position
Unknown
AA seq
555 aa
AA seq
DB search
MSQLNISTGKRGRGIASTSASTVSALSSSTDLASLFECPVCFDYVLPPILQCQSGHLVCT
NCRPKLSCCPTCRGPLGNIRNLAMEKVASNVMFPCKYSTSGCTVSLVHTEKADHEDACEF
RPYSCPCPGASCKWQGSLEQVMSHLMMSHKSITTLQGEDIVFLATDINLPGAVDWVMMQS
CFGHHFMLVLEKQEKYDGHQQFFAIVQLIGSRKQAENFAYRDYMGGIKYTGKESLVNKVV
IVTGANTGIGRKTVLELAKRDAKIIMACRDMKKCEKARQDIVLETKNKYIYCRKCDLASQ
ESIRKFVEQFKNEYDKLHILINNAGVMRCSKSYTKEGIEMQLGVNYIGHFLLTNLLLDVL
KTSAPSRIVNVSSASYYRGQINLTDLNSDKEYDAGNAYTQSKLAIIFFTRELANKLRGTG
VTVNAVHPGIVDTNITRHMFVYNNFFTRIFLKPFAWPFIRAPLQGAQTVLYAALDPSLTD
VSGCYFDNCEIKEVSDEAKNDDLAKWLWKVSEKWTKLDIQLRSRFNNVINNRHDSAMEIG
GQKYRENHTKAGSIY
NT seq
1668 nt
NT seq
+upstream
nt +downstream
nt
atgtcccagctaaatatcagcacgggtaaacgaggcagggggatagcgagtacctccgca
tcgacggtatctgcgttgagcagttccactgatttggcaagtctctttgagtgccccgtt
tgtttcgactatgtgcttccaccgatcttacaatgtcagagcgggcatctcgtttgcaca
aattgccgaccaaaactctcatgctgtcccacatgcaggggtccgctaggtaacatccgt
aatctggctatggaaaaagtagcaagtaatgtgatgttcccctgtaaatattccaccagt
ggctgcacagtttcactggtgcatactgagaaggcagaccatgaagatgcatgcgagttc
cgtccatatagttgtccttgcccgggtgcatcctgtaaatggcagggatcactggaacaa
gtaatgtctcatcttatgatgagccacaaaagtattacaaccttacaaggagaagacatt
gtctttttggcaactgatattaatcttcctggagctgtggattgggtaatgatgcaatcc
tgttttggccaccactttatgctagtgcttgagaaacaagagaaatatgatgggcatcaa
cagttctttgcgattgtacaattgattggttcaaggaagcaagcagagaactttgcttac
agagattatatgggaggtataaaatacacaggcaaagagagcttagtcaacaaagttgtt
attgtgacaggagctaatactggtattggaaggaagacagtcttagagttagccaaacgt
gatgcaaaaattattatggcatgcagagatatgaaaaaatgcgaaaaggcacgccaagat
attgtacttgagacgaagaataagtatatttactgtaggaaatgtgatttagcatcgcaa
gaaagtattagaaaatttgtcgagcagtttaagaacgaatacgataaacttcatatactt
atcaataatgctggtgtaatgagatgttcaaagagttataccaaagaaggtatcgagatg
cagcttggagtcaattatataggacatttcttgctcacaaatttacttctagatgtttta
aaaacatccgcaccatctagaattgtgaatgtatcgagtgcctcttattatagaggccaa
ataaatttgacagatttaaatagcgataaagagtatgatgctggtaacgcttatacacaa
agtaaattagccataatttttttcactagagaattggcaaacaaattgagaggaactggc
gttactgtaaatgctgttcatcctggtatagtggatacgaatataacgcgacatatgttt
gtatacaacaacttcttcacacgaatattcctgaagccatttgcttggccgtttattaga
gcgcctctgcaaggggcgcaaactgttttgtatgcagcgttagatcctagtcttacagat
gtttctggctgttatttcgataattgcgaaattaaggaagtatcagatgaagccaaaaac
gatgatctggcaaaatggctatggaaagtcagtgaaaaatggacaaaattagatatacaa
ttaaggagtcgatttaacaatgtcattaataataggcacgatagtgcaatggaaatcggc
ggacagaagtatcgagaaaatcatactaaagccggcagtatatactaa
DBGET
integrated database retrieval system
