Polyergus mexicanus: 138939796
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Entry
138939796 CDS
T10742
Name
(RefSeq) nuclear RNA export factor 1
KO
K14284
nuclear RNA export factor
Organism
pmec Polyergus mexicanus
Pathway
pmec03008
Ribosome biogenesis in eukaryotes
pmec03013
Nucleocytoplasmic transport
pmec03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pmec00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
138939796
03015 mRNA surveillance pathway
138939796
03008 Ribosome biogenesis in eukaryotes
138939796
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pmec03019
]
138939796
03009 Ribosome biogenesis [BR:
pmec03009
]
138939796
Messenger RNA biogenesis [BR:
pmec03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
138939796
mRNA cycle factors
Stress granule specific factors
138939796
Ribosome biogenesis [BR:
pmec03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
138939796
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NXF_NTF2
LRR_NXF1-5
Tap-RNA_bind
TAP_C
NTF2
LRR_8
LRR_4
LRR_9
Motif
Other DBs
NCBI-GeneID:
138939796
NCBI-ProteinID:
XP_070164078
LinkDB
All DBs
Position
Unknown
AA seq
646 aa
AA seq
DB search
MPRKSNKSWGGRNGRGNAPSDDKHYFGHDDRMGRNNGGSHLEGTRPRVSFKTHRPNREIS
RNAVLTSLDEDIPMTGNNNNNNRQTRQVIIAPRDRDRRDRWQRKIARGRNSPLPNRNFKG
GQSGPRIQALPIGESNWYRISIPYGQKYEKDYVLRSLLNYMAPEVFIPITYKIMGNEASF
YVDDHKTASALLNCDRKITMTDGFKLQVRVKPGFPQCEIDDKLKEQLKQAMSKRYVQETN
ALDLSKFHRDPDLIGDYFCALFRPAMLMTVLDIVGEHIPTLEALNLEGNKLQNIDRLSVL
NKKFSNLKILYISDNKIKDIHQIDAIKDLKLEELKLIGNPVCNKYKSRQNDYISDVRKRF
PKLLRLDGTELPRPIVFDVIDEAAKVPPSQRMFVADVKAQEIASQFLQQYFTIFDSENRQ
PLLDAYDEHACFSMTITTSHNNKLNGYLMENRNLFRIYDMARRQKLLKHGRLPVVSFISE
MPRTKHFLDTFTMDIALATQVMMFITITGYFQELDNKEQLIRHFNRTFIIVPEGSGYCIR
NEQLHISQPPEAQLKQLNQQLNNQPTQPEASALLPQTSTQMAKSILPELNEDIKQQMTMT
LSQQTNMNLEWSLKCLQETQWNYNNALSAFQEFFKRGQIPSEAFTK
NT seq
1941 nt
NT seq
+upstream
nt +downstream
nt
atgccgaggaaatcgaataaatcctggggtggtcgcaacggccgcggaaatgctccttcc
gacgataaacattattttggccatgacgatcgtatgggaagaaataatggaggatctcat
ctcgagggaaccagacctcgtgtatcatttaaaacacatagacctaacagagaaatatcg
cgtaacgcagtgttaacaagtttagatgaagatattccaatgacgggcaacaataataac
aataatagacaaacaagacaagttattattgctccgagagacagagataggagagataga
tggcaaagaaagattgctcgaggaagaaatagccctctaccaaacaggaatttcaagggt
ggccaatctggtcctagaatacaagcacttccaataggagagtccaattggtatagaatc
agcataccatatggacagaaatatgaaaaagattatgttttaagaagcctattaaactac
atggcacctgaagtgttcattccaataacgtataagataatgggaaacgaagctagtttt
tatgttgatgatcacaaaacagcaagtgcattactaaattgtgatcgtaagattacaatg
acagatggctttaaactacaagtgagggtaaaaccaggatttccacaatgcgagattgat
gacaaattgaaagaacaattaaaacaagcaatgtccaagagatatgtgcaagaaacaaac
gctttggatttgtcaaagtttcatcgagatcctgatctcattggtgattatttttgtgca
ttgttccgtcctgcaatgttaatgactgtgttagatattgtgggtgaacacataccaact
ttggaagccttgaacttagaaggcaataagctgcagaatattgacaggctcagcgtatta
aataaaaaattttcaaacttaaagattctttacatcagcgataacaagattaaggacatc
catcaaatagatgccattaaagatctaaaattggaagaattgaaattaatcggaaatcct
gtttgtaacaagtataagtctcgacaaaatgactatattagcgacgtccggaaacggttc
ccgaaactgctgcgtctggacggcacagaactaccacgaccaatcgtattcgatgtgatt
gacgaggctgctaaggtaccaccatcgcagagaatgtttgttgctgatgtgaaagcacag
gaaattgcaagccagtttttgcaacagtacttcacaatatttgacagtgaaaaccgtcag
cctctacttgacgcgtacgacgaacacgcatgctttagtatgacaataactacttctcac
aataataagttaaacgggtatctcatggagaaccgaaacttgttcagaatatatgatatg
gccagaagacagaaattattgaaacatggtagattacctgtagtttcttttatatcagaa
atgccacgaacaaagcatttcctagatacctttaccatggatattgcccttgctacacaa
gtaatgatgttcattacgataacgggctattttcaagagcttgataataaggaacagctt
attcgccacttcaaccgaacatttataattgttccggaaggtagtggatattgtattcgc
aatgagcaattacatattagtcaaccgcctgaggcgcaactaaaacaattgaaccagcaa
ctaaacaaccaaccgacccaaccggaggcgtcggcgttattgccacaaacatccacgcaa
atggcaaagtctatacttccggaattgaatgaggatataaaacagcaaatgacaatgacg
ttgagtcagcaaacgaacatgaatttggaatggagtttgaagtgtttacaagagacacag
tggaactataataatgcgctctctgcatttcaagagttcttcaaacgtggtcaaatacca
tcagaagcgtttacgaaataa
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