Polyergus mexicanus: 138940089
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Entry
138940089 CDS
T10742
Symbol
Nup188
Name
(RefSeq) nucleoporin Nup188
KO
K14311
nuclear pore complex protein Nup188
Organism
pmec Polyergus mexicanus
Pathway
pmec03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
pmec00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
138940089 (Nup188)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pmec03019
]
138940089 (Nup188)
Messenger RNA biogenesis [BR:
pmec03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
138940089 (Nup188)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nup188_N
Motif
Other DBs
NCBI-GeneID:
138940089
NCBI-ProteinID:
XP_070164723
LinkDB
All DBs
Position
Unknown
AA seq
1930 aa
AA seq
DB search
MEVSPMGNLPCSKDLWSIISGTTCYCAKETVEDEIKNGTVLLKEGLQFFKPYTDASLQSI
SKRDPPPLQQMYDLISKLAPLINLDATITWDLVCNFVSYEYRNCAETFATQLTDLTSIKS
LIDDIWNFYYSERVTLIKCLKLMIEYKDNERHPYHKEFAKFFDEILMGNLLESIQKQIKI
LKFVNPPTRSQFCTEDYLHRLYNSTLIEMRELLHILTVIVHDVHIADYDFVKFYGSIGGE
PRRLANTKSHEDKEAIIKKIEEIQYSQTGLLLVALDVRKHAAMEDWINSIRSSMQEIFEH
KCVRENLPQDGPLLLSWMLANYAIDPDNIDTLNRFRPFGIKAIQLDVFHYLRDLMNCEMF
QEETYYAEIVRSSVYNLLTLVCAFVDEDRLSAFNGIFDAMAATIKFPECATRFWNEQCDG
LWPIYKVAVELYPYKFQPLTSIAIGLASTTITSAKKIALELDNLQTVTIEIPRQRDHSKS
LQPYKAECIIQKNLFTIPSNSARENIAVLSIEKEVVLFRTKASYWNALHHKIEQLFSQAD
GGIANISVVKTDLPENVCHGLKLLETLLAKDIEIPLNMVIPTELSFEIVNRFSYPVLPTN
LYKIVAVCIGISSKLVLRYPEDILSRMRSGVYPKFNNWYQKPIDFAEAISFDGGLIASWL
SGIETIEHTYPILRAFLDTLYNYLISKHSKEAMYTIEIPGMVFLLQAVLPKLDSWYFKSN
AERIDLWLKSMYCIHRALESTLSKNDIRKELQLVVVYSLLYLEPRHALLKLLRMGERTLH
NKMITETDWISGKGFKTIKTVELALSIVNRLLMFRKSLDLELDDRSPLEIALYSSPRVPN
GLLIVPTIVNYLYVWFSPSLQKMAVRLLKKFAEEFSMSLLVCMGMDGTSIRETFAFRLTL
PTCAIEVKVAILELVAVCLEKQPGLTEALFNIMHQAERKRIFPRSADEFLTEGCSQFLDS
YLERMYKESDIVCDKLYDSTMAVLRAMWYYRNEILVNFFRKREKFWSHLFAPLFKPLVPG
VKGYSQLLDVITLELYKSPLLEDNFSKNLKELLDKTKDHWKKLAIYVLDVVANGEDESTK
EEHIKQDKTVDPLYEINLESWYHFIVMLTDDRTAKHYPINVTQAHLLTQLALDSLLERVK
ESNDTSSGKIPMLLASLSLRCITSWKQMCVGDSRIFKTRLSQLTQEIAQTYRGFGKALRQ
TMISLLLGCVQLVKSTLAEDSASLEYLLAHSCTIAICELEELKEAAFQLERRKQQISIDL
IKTEKKDTQKKADYYSAEILRGIRESLPATLAVCMVTQLLRSYVERNANFKHRLRASCVQ
LRQMVPELMACVGYTVQKYPYFKFSIAALSLLGVISRSPYCPHPISDNDIAKLWLSLIPP
EDIANSMLDSLYDDSPNGRWRCQDWWPLYTLGLEFLIGLVTSETHMVYINHVILFLNSHE
HQLMIVSTLLRHTADLLAADLIQSLIALIHAVATQTYVWNAIQPSVRETLIKCMYLVYDS
TVNLLLRPRILKFIIDGISVESAEELESCDNRLPSGELKLLVNKLIVINTTCALTFVHFS
PKLNTLVDTIYTQNYWYTPMAEMNFGPPQMSMSSGPRLTYGTIISSTQLFTQALHSRSQP
VASLPASLIPHTTGREDKTDSAKKEWERAAPDNLRRMHTSKDLRRIIHAASGSISRMSTS
NIGSREFLGYPVSGLDVTVPLLSSPRLVRRPYDPLICENTILSRATALATGRHVTKSSGS
GTGGNGSPIIARNHRFCDPWFESMDENNTRLALEINLILILSQALEGVKSPRLALRDRQL
IARETATELGVFFDFLEHRGTPDIWQVKGSLIDVDTRSSRTIQDTSDLTQMNLPARLQKN
STIDKAPVCSPDHEDFSMEIIQAETPEKRLDDSILTTGVFKTNVSSVQFLPLMGKLLKTV
VESLDSAQFR
NT seq
5793 nt
NT seq
+upstream
nt +downstream
nt
atggaagtgtctccaatgggcaacttgccttgcagcaaagatttatggtccataatatct
ggcacaacatgctattgtgcgaaagagactgttgaagatgaaataaagaatggaactgtt
ttactcaaggaaggtcttcagttttttaagccatatacagatgcatcattgcaaagcatc
tctaaaagagatccacctcctcttcaacagatgtatgatttgattagtaaacttgctcca
cttattaacttagatgccacaattacctgggatctcgtgtgcaattttgtgtcctatgaa
tacagaaattgtgcagagacttttgcaacacagcttactgatcttacgtctataaaaagt
ttaatcgatgatatttggaatttttattactctgagagagtgaccttaataaaatgtctt
aaacttatgattgaatataaagacaatgaaagacatccttatcacaaggaatttgcgaaa
ttttttgatgaaatcttgatgggcaatctccttgaatctatacaaaagcaaataaaaata
ttgaaatttgtaaatccgcctacacgatcgcaattctgtactgaagattacttacataga
ttatataatagtactttgattgaaatgcgagagctgcttcacatactgactgtgattgtg
cacgatgtacatattgctgattacgattttgttaagttctatggaagcattgggggtgaa
cctagacgattagcgaatacaaaaagtcatgaagacaaggaagctatcataaaaaagatt
gaagaaatacaatatagtcaaacaggattattacttgtagcattagatgtgagaaagcac
gctgctatggaagattggataaatagcatcagaagtagtatgcaagaaatttttgaacac
aaatgcgttcgtgagaatttaccacaagatggaccattgcttctatcttggatgttagca
aattatgcgattgacccggataatatagacacattaaatcgcttcagaccgtttggtatt
aaagctatacaacttgatgtgttccattatttgcgagatttaatgaactgtgaaatgttt
caagaagagacctattatgctgaaattgtgcgaagcagcgtttataatcttctcactttg
gtgtgcgcttttgtcgacgaagatcggttaagcgcttttaatggtatttttgacgccatg
gctgctacaattaagttcccagaatgtgcgactagattttggaacgaacaatgtgatggc
ttgtggccaatttataaagttgctgtagaattatatccatacaagtttcagcctttaacc
agtatagctattggtcttgcatccacaaccattacaagtgccaagaagattgcattggaa
ctggataatctacagacagtgactatagagattcctcgtcaaagagatcatagtaaatcg
ttacagccatacaaagcggaatgtataattcagaaaaacttatttactatacccagcaat
agtgcgcgtgagaatattgccgtgttatctatagagaaagaagtggttttatttcgtaca
aaggcgagttactggaatgctttgcatcataaaatagaacagttattttctcaagccgac
ggcggaattgcaaatatcagtgtggtgaagacagatttaccggaaaacgtttgtcacggt
ctcaaactattggaaacattattggccaaagacattgagataccgttaaatatggtcatt
cccacggagctgagtttcgagatcgttaaccgattctcatatccggttctaccaacaaac
ttatacaaaatcgtcgccgtgtgcatcggtatctcatcgaaattggttttaagatatccc
gaggatatcctctcacgtatgcgatcgggtgtttacccgaaattcaataattggtatcag
aaaccgatagacttcgctgaagcaatttccttcgatggtggtcttatcgcgtcgtggctt
tcaggaatagaaactatcgaacacacttatcctattctacgcgcatttttagacacgtta
tacaattatctaatctccaagcatagtaaagaggctatgtatactattgagataccgggt
atggtgtttttgttacaagctgttttacccaaattggactcatggtattttaaatccaat
gcagaaagaattgacttatggctaaaaagcatgtactgtattcatcgggctctagaatct
actttatccaaaaatgatatccgcaaagaattacaacttgttgtagtatatagtctgctc
tacttggaaccgcgtcacgcgttattgaagttactccgaatgggcgaacgtacattgcac
aataaaatgatcacggagactgattggattagtggaaaaggattcaagactatcaaaacc
gtagaattagccttgtcgatagtcaatcgacttttaatgtttagaaagtctttggatctc
gaactggatgatagatcacctctcgagattgctttgtattcctctccgagggtacctaat
ggacttctcatagtgccgaccattgttaattatttgtacgtttggtttagtccttcattg
caaaaaatggcggttagattactgaagaagtttgcggaagaattttctatgtctttgctc
gtttgtatgggaatggatggtacctctatacgagaaaccttcgcatttcgattgacgcta
ccgacatgtgcgattgaagtaaaagtcgctatcctggaattggtcgccgtatgtctggaa
aaacagcccggcttgacggaagccctcttcaacatcatgcatcaagcggaacgcaaaaga
attttcccgcgttcagccgatgagtttcttacggagggctgcagtcaattcttggactcg
tatttagaacgaatgtacaaagaaagtgacattgtgtgcgacaagttgtatgacagcacg
atggcggtattacgtgccatgtggtattacagaaacgagattctcgtaaatttctttcga
aagcgagagaaattttggagccatctattcgcgccacttttcaaacctctagtaccgggt
gtgaaaggttattcccaattgttggatgtaattacgttagaattatataaaagcccatta
ctcgaagataatttctcaaaaaatctaaaagaacttttggataaaaccaaggatcattgg
aagaaattagccatatatgtccttgatgttgtcgcaaacggcgaagacgaaagtactaaa
gaagagcatataaaacaagacaaaaccgtcgatccattatacgaaattaatttagaatct
tggtatcactttattgtcatgctcactgacgatcgaacggctaaacattatccaattaac
gtaacgcaggcgcatcttctaactcagctggccctggattctttattggagcgagtgaaa
gaatccaatgataccagcagcggtaaaattcctatgttactggcctctttgtccttaaga
tgcatcacttcttggaaacagatgtgtgttggcgattcgaggatctttaaaaccagactg
tcacagctcacgcaagagatagcacagacttaccgtggcttcggaaaggccctacgccaa
acgatgatttcgttactgcttggatgcgtgcaactggtgaaaagtaccttagccgaagat
tcagcgagcctggagtatcttttggcgcattcctgcacgatcgctatttgtgaattggaa
gaattgaaggaagctgcctttcaactagaacgtcgaaagcaacaaatctctatcgatctc
atcaaaaccgagaagaaagatacgcagaaaaaggctgactattacagcgcggagatcctc
cgtggtatacgagaaagtttaccggcaacattagctgtctgcatggtgacgcagttgtta
cgatcatacgtcgaacgtaatgcaaatttcaagcatcgtctacgagccagttgcgtacaa
ctgcgtcaaatggtacctgaattgatggcatgtgtcggttacacggtgcagaagtatccg
tattttaaattcagtatagcagctttgagtctgctgggtgtcatatcgcgttcgccgtac
tgtccgcaccctatcagcgacaacgatatcgcgaagctctggctcagtctgatcccgcca
gaagacatcgctaacagtatgctcgactcgttgtatgacgattcgccgaacggtcgatgg
cgttgccaggattggtggccgctgtacaccctgggcttggagttcctaataggtctagtg
actagcgagacgcacatggtgtatatcaatcatgtgatccttttcttaaattctcatgaa
catcagttaatgattgtctccactttactgagacacaccgcagatttgttggccgccgat
ctgatacaatcgttgatcgctcttatacatgctgtagctacgcaaacatatgtttggaac
gcgatccagccaagcgtccgcgagactctgatcaagtgcatgtatctggtatatgacagt
acggtgaacttgttgttaagaccacgaatactcaagttcatcattgatggcattagcgta
gaaagtgccgaggagctcgagtcttgcgacaatcgattgcctagcggtgagttgaagcta
ctcgtgaacaaactgattgtcataaacacgacctgtgcgctaaccttcgttcacttctct
ccaaaattgaacactctcgtggacacaatatacactcagaattattggtatacgccgatg
gccgaaatgaatttcggcccaccgcagatgagcatgagttccggtccgcggctcacctac
ggcacaatcatcagttcgacccagctattcacccaggctcttcattcccgctcgcaaccc
gtcgcttcattgcctgcgtctttaatcccacacacaaccggacgcgaagataaaacggat
tccgcgaagaaggaatgggaacgcgccgcaccggataatctccggcgtatgcacacgagc
aaagatctacgaagaatcattcacgccgcttcgggctcaatttccagaatgtcgacatct
aacatcggttccagagaatttctgggataccccgtcagtggcctggacgttaccgtgcca
ttacttagcagtccaagactcgtacgtcgtccgtatgatccgttgatatgtgaaaacact
attctttcaagagcgaccgctttggcgaccggtagacacgtcacgaaaagcagcggtagc
ggcactggcggcaacggtagtccaattatagcaagaaatcatcggttctgcgatccgtgg
ttcgagtccatggacgagaacaatacacgactggcattggaaatcaatcttatcctgata
ctgtctcaggcgctggaaggtgtaaagagtcctagacttgcgttgcgagatcgtcaactt
atagcgagggagaccgctacggagctgggggtcttcttcgattttctcgaacaccgtggc
acaccagatatctggcaggtgaagggctccttgatagatgtggatacacggagctccagg
acaattcaggataccagtgatctgacacaaatgaatttacccgcaagactccagaagaac
agtaccattgacaaagctccagtgtgttcacccgatcacgaagacttttccatggaaata
attcaagccgagacaccagagaaaagacttgacgacagtattcttacaactggtgttttc
aaaacgaatgttagcagcgtacaattcttgccgttgatgggaaaacttctcaagacagtt
gtcgaatcgttggattcggcacaatttcgataa
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integrated database retrieval system
