Polyergus mexicanus: 138940475
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Entry
138940475 CDS
T10742
Symbol
Btz
Name
(RefSeq) protein CASC3 isoform X1
KO
K14323
protein CASC3
Organism
pmec Polyergus mexicanus
Pathway
pmec03013
Nucleocytoplasmic transport
pmec03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pmec00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
138940475 (Btz)
03015 mRNA surveillance pathway
138940475 (Btz)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pmec03019
]
138940475 (Btz)
Messenger RNA biogenesis [BR:
pmec03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
138940475 (Btz)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Btz
Motif
Other DBs
NCBI-GeneID:
138940475
NCBI-ProteinID:
XP_070165506
LinkDB
All DBs
Position
Unknown
AA seq
788 aa
AA seq
DB search
MSDTRRRRKSNQSCGSDDLSDSYEELNATKETQSSEQTDGHQDSECDIYESDSDAESQEG
GEQRESGDGQEEEKPQKKLDDDEDRRNPQYIPKRGTFYEHDDRTTDEVTDNNAETQTSAK
ETKEKKVWKDKEDKWDHDRYNDEEQAPKRPEELIATYGYDIRNEEGPPRARRRRRYGRGP
NKYTRNWEDEDAYGKTTTPGRGNNRRFHKNSEDFPALGNSKNTSSKVEEPVISSAWYSSK
NKTQNKTQNFPPLQSQQDNTKTKPATVSNTFINENKAPDEPTNTSWKKDGKHIVQNQNIN
GSAGSGGDAEKSVNIKTSPRENNKRNPPESVSLAASRTRGRGFKSNANNNMVTNRIVENK
SKGRGPGSVTIENRRNNTAQHNDEHQLVHDMKQVNINDDSQYHQPVRHNKGFFASSNQHR
SNTVPPRMQQSHQQQTHAQQQTIQQQQQDSSGSRPKRYSSLRQRPTISETSTQQNYPSQH
AQHGYFPPQAGNSRAVLESQGYPQGHFEQPSPATAPITGQPVISLPGGQPASYAPPAFLV
PPPQFIPPQTAPPSIINYVPGPNGPTFSPNYQGYQGYNPSVQPQGPPPPQELFQPQGCTY
YSPAQQQQQQQQAALMRRPKAAIPILPPPDNQQSGRGRGRSTQQYQNNQSGSNTQQIEQQ
EIKSGNAVESDEKPIPGQFDSAQVEQSYTPVQESQENQISDMVRTVNDADEKVEINTNVD
TRIIVDTLVQKDNVEDSISVKELLETTSNEKNTITDSPTTSTIVETERELGNIESAIPES
TIVEKAAA
NT seq
2367 nt
NT seq
+upstream
nt +downstream
nt
atgtcggacacacgacgacgtcgaaaatccaatcaatcgtgcggctctgacgatctctcg
gactcgtacgaggagctgaacgcgacaaaggagacccagagtagtgaacagactgatgga
catcaagattcagaatgtgacatttatgaaagtgattcggatgccgaatcgcaggaaggt
ggtgaacaacgtgaaagcggagatggtcaagaggaagaaaaaccgcaaaagaaattggac
gacgacgaggacagacgtaatccgcagtatattccgaaacgaggaacgttttatgagcac
gatgatcgtacaactgatgaagtaactgataataacgcagaaacacaaacaagtgcaaaa
gaaactaaggagaagaaggtatggaaggataaggaagataagtgggatcatgatcgatat
aatgatgaagaacaagctccaaaaagacctgaagaattgatagcaacttatggttatgat
attagaaatgaagaaggaccacctagagctagaaggagaagaagatatggtcgtgggcct
aacaaatatacaagaaattgggaagatgaagatgcttatgggaaaactactactcctggt
agaggaaataacagacgcttccataaaaatagtgaagattttcctgctcttggtaatagt
aagaatacttcaagtaaagtagaggagcctgtgatttcatcagcttggtacagtagcaag
aacaaaacacaaaataaaacacaaaattttccgccacttcaatctcagcaggataacaca
aagactaagcctgctactgtctctaatacattcataaatgaaaataaggcaccagacgaa
cctaccaatacatcttggaaaaaggatggcaagcatattgttcaaaatcaaaatataaat
ggaagcgcaggatctggtggtgatgcagaaaaatcagttaatatcaaaacatcaccaaga
gaaaataacaagaggaatccgccagagtctgtaagcttggccgcgagtaggacgcgtgga
aggggtttcaagtccaatgctaataacaacatggtcactaacagaatagttgagaataaa
tcaaagggacgtggccctggttcagttacaatcgagaatagacggaacaatactgcgcag
cataatgatgaacaccagcttgttcatgatatgaaacaagtcaatattaatgatgatagt
caatatcatcagcctgtacgacataataaaggcttttttgcatcctccaatcaacataga
tcaaacacagtaccacctagaatgcaacagtcacatcagcaacaaacgcatgcgcaacaa
caaacaatacagcagcaacaacaagatagttctggaagcagacccaaacgatactccagt
cttcgtcaacgacctactatttcagaaacttccacccaacaaaattatccatctcaacac
gctcaacatgggtattttccacctcaagctggaaattcaagagctgttttagaatctcaa
ggttatccacaaggtcatttcgaacagccttctccagccacagcacccataacaggacaa
cccgttatttctttacctggtggacaacctgctagttacgcgccgccggcatttttagta
ccgccaccgcaattcatacctcctcaaacggcgcctcctagtataattaattatgttcct
ggtccgaatggaccgacattttcaccaaactatcaaggttatcagggatataatccttca
gtacagcctcaagggccaccgccaccgcaagaattgttccaaccacaagggtgtacttat
tacagtccagcgcaacaacagcagcagcaacaacaagcagctcttatgcggcgaccgaaa
gcggcgatacccattcttccaccgcctgataatcagcaaagcggaagaggaagaggtaga
agcactcagcagtatcagaataatcaatcaggtagtaatacacaacagattgaacaacaa
gaaatcaagagtggtaacgcggtggaaagtgacgaaaaaccaataccgggacaattcgat
agtgcacaagtcgagcagtcatatactccggttcaagagtctcaagagaatcaaatttcg
gacatggtcagaacagtgaatgacgcggatgagaaagtagaaataaataccaacgtcgat
actcgtatcattgttgacacgcttgttcaaaaagataacgtggaggatagcatcagtgtc
aaagaactgttggaaacaacttctaatgaaaaaaatacgattacagacagtccaacgacg
tcgaccattgttgagactgaacgcgaattaggtaatattgaatccgcgattcccgagagt
accattgtggaaaaagctgcagcttaa
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