KEGG   Polyergus mexicanus: 138940765
Entry
138940765         CDS       T10742                                 
Symbol
Tex
Name
(RefSeq) THO complex subunit 3
  KO
K12880  THO complex subunit 3
Organism
pmec  Polyergus mexicanus
Pathway
pmec03013  Nucleocytoplasmic transport
pmec03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:pmec00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    138940765 (Tex)
  09122 Translation
   03013 Nucleocytoplasmic transport
    138940765 (Tex)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pmec03019]
    138940765 (Tex)
   03041 Spliceosome [BR:pmec03041]
    138940765 (Tex)
Messenger RNA biogenesis [BR:pmec03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX complex
     138940765 (Tex)
Spliceosome [BR:pmec03041]
 Complex C
  Other components
   EJC/TREX
    138940765 (Tex)
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    138940765 (Tex)
SSDB
Motif
Pfam: Beta-prop_THOC3 Beta-prop_IFT122_1st Beta-prop_WDR5 WD40_CDC20-Fz WD40 WD40_Prp19 Beta-prop_WDR3_1st Beta-prop_EML_2 WD40_WDHD1_1st EIF3I ANAPC4_WD40 WDR55 Beta-prop_WDR36-Utp21_2nd Beta-prop_Aladin Beta-prop_WDR19_1st Beta-prop_WDR3_2nd WD40_Gbeta Beta-prop_CAF1B_HIR1 Beta-prop_RIG_2nd Beta-prop_TEP1_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_Vps41 Beta-prop_IFT140_1st Beta-prop_WDR36-Utp21_1st WD40_MABP1-WDR62_2nd Beta-prop_HPS5 Tricorn_2nd RMC1_N WD40_MABP1-WDR62_1st eIF2A Beta-prop_EML Beta-prop_NOL10_N Beta-prop_WDR35_TULP_N NBCH_WD40 DSE1_N WDR90_beta-prop_4th PAC11 Beta-prop_TEP1_C Beta-prop_ELP1_1st B-prop_COPA_B_2nd TRM82_WD Beta-prop_WDR75_1st PD40 Beta-prop_EIPR1 PROPPIN Beta-prop_Nup120_160 DPPIV_N
Other DBs
NCBI-GeneID: 138940765
NCBI-ProteinID: XP_070166059
LinkDB
Position
Unknown
AA seq 322 aa
MAAIASRVEELVKYFKSHNKIREQQSHSAKVHSVGWSCDGKYLASGSFDKSVCIFSLCPD
RLKQETTFRGHGGSVDQLCWHAFYPELLSTASGDKTVRIWDTRTQKCTANISTRGENINI
SWSPDGNTIAVGNKEDLVTFIDARVMKIRAEEQFNFEVNEISWNKDSDTFYLTNGQGCVH
ILSYPELELLHVIKAHPGTCICIEFDPTGRYFATGSADALVSLWDADELCCLRTFSRLDW
PVRTISFSFDGQLLAAASEDLVIDIGEVETGEKIADVPVEAATFTVAWHPKQYLLAYACD
DKDTYDRKRDAGSLKVFGFAND
NT seq 969 nt   +upstreamnt  +downstreamnt
atggcggctatcgcttcacgagtggaggagctcgttaaatattttaaatcgcataacaaa
attcgggagcagcagagtcactcggcaaaggtgcacagcgtgggatggagctgcgatggc
aaatacctggcctcgggctccttcgacaagtccgtttgcatattttctttgtgtcccgat
cgtttgaagcaggaaacaacttttagaggacatggcggtagcgtggatcaattgtgctgg
catgccttctatccagaattattatccacagcgagcggagataagacagttcgtatttgg
gatacaaggacgcagaaatgtacggcaaacatcagcacaaggggggagaatatcaacata
tcatggtcaccggacggtaacacgatcgcggttgggaataaggaggatctcgtgactttc
atcgatgcccgggtaatgaagatacgcgcggaggaacagttcaacttcgaggtaaacgag
atctcgtggaacaaggactcggacacattctatctgacgaacggccagggttgcgtgcac
attcttagctatcccgaattggaactgttacacgtgatcaaggcgcatcccggtacgtgt
atctgcattgagtttgatccgactggccggtattttgccaccggatcagcggatgcgctg
gtgtccttatgggacgccgacgaattgtgttgcttgaggacgttttcgcgattggattgg
ccggtgcgcaccatctccttctcatttgatggacagctgctggcggcggcatccgaggat
ttagttatagatatcggtgaggtggagaccggcgagaagatcgccgatgtcccggtggag
gcagcgacattcactgtcgcgtggcacccaaaacagtatcttctagcttacgcgtgcgat
gataaggacacttacgatcgcaaacgcgacgccggaagcttaaaggtgttcggcttcgca
aacgattga

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