Polyergus mexicanus: 138941219
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Entry
138941219 CDS
T10742
Symbol
Sima
Name
(RefSeq) uncharacterized protein Sima isoform X1
KO
K08268
hypoxia-inducible factor 1 alpha
Organism
pmec Polyergus mexicanus
Pathway
pmec04137
Mitophagy - animal
pmec04140
Autophagy - animal
pmec04148
Efferocytosis
Brite
Transcription factors [BR:
pmec03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
138941219 (Sima)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Other DBs
NCBI-GeneID:
138941219
NCBI-ProteinID:
XP_070166756
LinkDB
All DBs
Position
Unknown
AA seq
1519 aa
AA seq
DB search
MNTRLYYLAAKEEEEEGGGGEEEAGRKGGGIILGNDPRNPVWIDRISSCDADFDECHPRK
RDEINFPSRGSSLPPSSYDPAVVLSNMDTLRNNIGATTSSNVTSRIDDRPRIYDIETSCT
TTRCATYAPNVNCNMVCCAVPATICNIASTTRNVASGDPMATLLCNDNGHLIDPSQSESM
AVPRSCQSGPIDVEDLAMYFDPCKPLSTAINRAIYSKRPRYGQGARIDEPRQEDDRRYLD
FCNLRPCVALESSDSRPCDLGSSDPIVVNDHLSCNLGNTGNLAYRDLGFDDQRSCYLGFG
NVSRFDDVDPPQFYNIPFTYDARLRKIGQNDPGQSDPSGPKWSSDWLRDNCPELFNFCSE
ERWLRCPASDRCPLYDTSYAHSAPAVLPPCLYGNLHTDYSDNWRYDYAEDEQLVEDYLNN
EKRKERSRDAARCRRSKETDIFAELAAALPVEPEQAAHLDKASVMRLAIAYLKVRSVVDS
IPVSLTKSESSAEIDELFPKALNGFMLVLSSDGNMVYLSENVSDYLGVSQMDMMGQSVYE
YSHPCDHDELRECLCSKPTDKDEKRTCSFFLRLKCTLTNKGRKVNLKSASYKVIHCTGKL
TDIRNSNSNSMEVENEEREKEDELTEQDTSACLVIVGSPIPHPSNIEIPLGRHTFLSKHS
LSMKFTYADEKLAEYLGWDSEELMGRSVFEFYHALDNLALDKCFKCLFSKGQCETVAYRF
LGKQGGYAWVVTQATLIHCSKQQKPISVVCVNYILSGLEHEDEIYSVRQLAARDSGVDFV
KSERSLLTPVATGAIKPTSDSCQVVLNDDEKISAKELAIDDESRSDDRPLAVTASIFRSA
NGKDDTRKDDDFPKQAQKTKTSVRILKESINESLKENDEPAAADRQNCCRPAFAKTPFIF
QGKPAVERDSTDSVERRDCPQAVTKHLFTPLVPTVQQQQQQQQQQQQEQSQLSCRPPPQT
ATASIFAPRTEDMNKGFLTFSEDQPGLTMLKDEPEDLTHLAPTAGDVCVPLEDTPFLSDM
LDEFIFDNYGCPLLSPGDTLTPELRSPDLSESLKETNLASTTTKSKNTTDRLADSDPFMY
GDSPGSPCGIDSSTVSPSLSKYRQSPECSVDSLGSPTGGSGGDGLSEDEMLMLGISDNIG
DDELALRAPYIPMSDQDEALELLISDDMVMWGSSQSDKASSKWLLDDREQRGSESNLAQL
LRTDQAVSRRYNDHGGGLMNPLFGQISKKNAILESARWSFNQERTDRPNKRIHSGLNADF
QTEHKRLKRGDSTFERINFDATLLTKQQRPSTTSYKKSPQPSLNNTYNSQLLRRLVSPQI
PYVVSSHTTSLSNDGNDKYCRGDISKQRVRILNDIIDLVETEDDHGGGGGGGNCVGDDLD
KIGTTSRNRNPTCGGSSVLMNLLVSGCDDPLMNSRNVPILLSRNVTTPLSINVDKQIISQ
CSNADNIVSLPDHLSPDTRKHLIGPFTGGGGDGGGTTPIISPTTSAMVSFDGFDYDGSTA
SLLQIGPDLLGGLLDRNLV
NT seq
4560 nt
NT seq
+upstream
nt +downstream
nt
atgaacacacgtttatattatttagcagcgaaagaagaagaagaagaaggtggcggagga
gaagaagaagcgggacgaaagggtggaggcatcattctcggcaacgatccgcgcaatcct
gtctggatcgacagaatatcgagttgcgacgctgatttcgacgaatgtcacccgagaaaa
cgagacgagatcaattttccatcgcgcggatcgtcgttgccgccgtcgtcttacgaccca
gcggtcgttctcagcaatatggataccttacgcaacaatattggcgccactacctcctcc
aacgtaacgtcgcgcatcgatgatagaccgcgaatttacgatatcgagacatcttgcacg
acgacgagatgcgccacgtatgcaccaaatgttaactgcaacatggtatgctgtgctgta
ccggcgacaatatgcaatatcgcgtcaacgacacgcaatgtcgcgagcggcgatccgatg
gcgacattactctgcaatgacaatggtcacctgattgacccctcacaatcggagagcatg
gcagttccgagaagctgccaatcgggaccgatcgacgtcgaggatctcgcgatgtatttc
gatccgtgtaagccgctctcgacggcgattaatcgcgcgatctattcgaagaggccgaga
tacggtcagggcgcacggatagacgagccccgacaggaggatgatcgtcgctatctagat
ttttgcaatctacgcccttgcgtagctctagaatccagcgattcacgaccatgcgatcta
ggatccagtgacccaattgtcgttaacgatcatctatcttgtaatctaggcaataccgga
aatctggcatatcgcgatttaggattcgacgatcagcgatcttgctatctgggatttggg
aacgtttcgagattcgacgatgttgatccaccgcagttttacaatataccgttcacatat
gatgcgagactgcgcaaaataggacaaaacgatccgggacaaagcgatccaagtggccca
aagtggtcgagcgattggctccgcgacaactgtccggaactgttcaatttctgtagcgag
gaacggtggttgcggtgcccggcgagcgatcgctgccccctttacgacacctcgtacgct
catagtgcccccgccgttctaccgccatgcttatacgggaacctgcacaccgattacagc
gataattggcgttacgactatgcagaggatgagcagcttgtcgaagattacttgaataac
gaaaaaaggaaggagaggtcccgcgatgcagcgcgctgcagacgtagcaaggaaaccgac
atctttgccgaactcgcggccgcgcttccggtcgagccggaacaagcggcgcatttagat
aaggccagcgtgatgaggttggcgatcgcttacctcaaagtccggtccgttgtggattct
attccagtttcgctgacaaaatccgagtcgtccgcagagatagatgaactatttccgaaa
gctctcaacggctttatgttggtactctccagtgatggcaatatggtctacctgtcggag
aatgtcagcgattatctcggagtgtcgcaaatggacatgatggggcaaagcgtgtacgaa
tacagtcatccctgcgatcatgacgaattgcgcgagtgcctctgttcaaaaccgacagat
aaggatgagaaacgtacttgcagcttctttctgcgactcaagtgtactctcaccaacaag
ggaagaaaggtcaatttaaagagcgcgtcttacaaggtgatccactgcaccggcaaacta
acagacatccgtaactcgaattcgaactccatggaggttgagaacgaggagcgagagaaa
gaggacgagctcacggaacaagacaccagtgcgtgtctagtgatcgtaggaagtcccata
ccccatcccagtaacattgaaatacctttgggacgccatacttttctgtcgaagcatagt
ctcagcatgaagttcacttacgctgacgaaaagttggctgaatatctgggctgggatagc
gaagagctgatgggtcgatcagttttcgagttttatcatgcactcgacaatctggcactg
gacaagtgtttcaaatgcctgttcagcaagggccagtgcgagactgtggcgtacagattc
ctcggtaaacagggcggctatgcctgggttgtcactcaagccaccctcattcactgttct
aagcaacagaagccgatctccgtcgtctgcgtcaactacatcttaagtgggctcgagcac
gaggatgaaatatacagcgtgcgtcagctggccgcacgtgatagcggtgtcgatttcgtg
aaatcggagagatcgttgctgaccccggtggcgaccggtgctatcaaaccaacgtcggac
tcgtgtcaggtggtgctgaacgacgacgagaagatttccgcgaaggaattggccatcgac
gacgaatcgagaagcgacgatcgaccgctcgccgtcaccgcgtccatcttccgttcggcc
aacggaaaagacgacacgcggaaggacgacgacttcccgaaacaggcacaaaagacgaag
acgtctgtgcgaattctcaaggagtctatcaacgagtcgctgaaggagaacgacgagccg
gcagcggcagatcgacagaactgctgccggccggcgtttgcaaaaacaccctttatattc
cagggtaaaccggcggtagagcgtgattccacagacagtgtcgaacgtcgtgattgtccg
caggcggttacaaaacatttgttcacgccgctcgtgcccaccgtacagcaacaacaacaa
caacaacagcagcagcagcaggaacaatcgcaactatcgtgccgaccgccgccgcagacg
gccacagcgagtatcttcgcgcctcgcaccgaggacatgaacaagggcttcctgactttc
agcgaggatcagccgggtcttaccatgttgaaggacgagccggaggacctgacgcacctc
gcgcccacggctggcgatgtatgcgtgcctctcgaggacactcccttcctgtcggatatg
ctggacgagtttatcttcgacaactacggttgccctctgctgagtccaggcgacaccctg
acaccagaattgcgttccccggatctctcggaatctcttaaggagacaaatttggcgagc
actactactaagagcaagaatacgactgatcgcctggccgatagtgaccccttcatgtat
ggcgactcacccggaagtccctgtggtatcgactcaagcactgtgtcaccatccctatcg
aaatatcgacagagtcccgagtgtagcgtggactcgttaggcagtcctacgggaggtagt
ggtggcgatgggctttccgaggacgagatgctcatgttaggtattagcgacaatatagga
gacgacgagctggccctcagagcgccctatattccgatgtcggatcaagacgaggcattg
gagttgctcatcagtgacgacatggtcatgtggggctcatctcaatctgataaagcatct
tcaaaatggctactcgacgatcgagagcagcgaggatctgagagcaatctggcacaacta
ttacgaaccgatcaagcggtatcgcggcgatacaacgatcacggcggaggtctgatgaat
ccgctcttcggacaaatatctaagaaaaacgcaatcctcgagtccgctcgatggtccttt
aaccaggaacggactgaccgtcctaataaacgcatccactccggactcaacgcggacttt
cagaccgagcacaagcgccttaagcgcggagactcgactttcgaacgcataaattttgac
gccactttgttgacgaagcagcagcgaccatcgacgacatcctacaaaaagtcaccgcaa
ccgagtctcaacaacacttacaatagccagcttctgcgtcgtctcgtatcaccacagata
ccgtacgtcgtatcgtcacacacaacgtctttgtccaacgatggcaacgataaatattgt
cgcggggatatttccaagcaacgtgtccgcattctcaatgatatcatcgatctcgttgag
acagaggacgatcacgggggaggaggcggaggtggaaattgtgtcggcgacgatctagat
aagattggaacgacgagccgtaaccggaatccgacctgtggcggcagtagcgtgttaatg
aatctcctggtttccggctgcgatgatcctctcatgaattctcgcaatgtgccaatcctg
ttatcgaggaacgtgacgaccccgttgtccattaacgtggacaagcagataatatcacaa
tgttcgaacgcggacaacatcgtatccctacccgatcatctcagcccggacaccaggaag
cacctgatcgggccgttcaccggcggcggcggtgatggcggaggaacaacacccataatt
tcacccacgacatctgcgatggtgtccttcgacggtttcgattatgacggatccaccgcg
agtctgctacaaatcggtccggatctgctcggcggcctgttggaccgaaatctggtatga
DBGET
integrated database retrieval system
