Polyergus mexicanus: 138941689
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Entry
138941689 CDS
T10742
Symbol
Ssl1
Name
(RefSeq) general transcription factor IIH subunit 2
KO
K03142
transcription initiation factor TFIIH subunit 2
Organism
pmec Polyergus mexicanus
Pathway
pmec03022
Basal transcription factors
pmec03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
pmec00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
138941689 (Ssl1)
09124 Replication and repair
03420 Nucleotide excision repair
138941689 (Ssl1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pmec03021
]
138941689 (Ssl1)
03400 DNA repair and recombination proteins [BR:
pmec03400
]
138941689 (Ssl1)
Transcription machinery [BR:
pmec03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
138941689 (Ssl1)
DNA repair and recombination proteins [BR:
pmec03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
138941689 (Ssl1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ssl1
C1_4
VWA_2
VWA
IBR
Motif
Other DBs
NCBI-GeneID:
138941689
NCBI-ProteinID:
XP_070167641
LinkDB
All DBs
Position
Unknown
AA seq
401 aa
AA seq
DB search
MAAEESEEKEYRWETGYEKTWEAIKEDDHGLLEASVADIIHNAKRKRQLERKQGARLGMM
RHLYIILDASESMSNQDLKPTRFLCSLKLLGDFIEEFFYQNPISQLGVIITRNKRAEKIS
DLAGNSKKHIKELQALQQTVVTGEPSLQNSLDLATKSLKLLPSHASKEVLIIIGALTTCD
PGDINETIRNMKLDGIRCSVIGLAAELYICKRMANVTGGEHGVALDDKHYKEQLNAHIDP
PPAAMRLDAALVKMGFPHHALHSSASDTSMTVCMCHAENSDESVKLMSTGYLCPQCFSKH
CELPVECRACGLTLVSAPHLARSYHYLFPVESFKEVAFESNHLFCFGCQKTFTQKDKKVY
ICGKCNQTFCLDCEIFIHEILHTCPGCATNPATYNKTTDKS
NT seq
1206 nt
NT seq
+upstream
nt +downstream
nt
atggcggcagaagagtctgaggaaaaggaatatcgctgggagactggttatgaaaagaca
tgggaagcaatcaaggaagatgaccatggattattggaagcatctgtcgcagacattatt
cataatgctaagagaaaacgtcaattggaaagaaaacagggtgctcgattaggaatgatg
agacatctttatatcattttggatgcctctgaatcaatgtcgaatcaagatttaaaaccg
actcgattcttgtgttccctaaagcttttaggagactttatcgaagaatttttttatcaa
aatcctatcagtcaattaggtgtgattataactagaaataaaagagctgaaaagattagt
gatttggctggcaactcaaagaagcacattaaggaattacaagctctacaacaaactgta
gtaactggtgaaccttccttgcaaaattctttggatttagctacaaaatcattgaaatta
ttaccatctcacgctagtaaagaagtattgataattatcggagctcttactacttgtgac
ccaggagacatcaatgaaacgatacgaaatatgaaattggatggtattaggtgtagcgta
ataggattagcagctgaattatatatttgtaaacggatggcaaatgttactggtggagaa
cacggtgttgcgctcgacgataagcattacaaagagcagttaaacgcgcatatagatcct
ccacctgctgcaatgcgattagatgcagcacttgtgaaaatgggcttccctcatcatgcc
ttacactctagtgcatcggatacatctatgacagtgtgtatgtgccacgcagaaaactct
gatgaatcggtaaaacttatgagtaccggctatctttgtccccagtgttttagtaagcat
tgcgagcttcccgtcgaatgtagagcttgcggtctcactttagtatctgctccacattta
gcacgatcatatcattacttatttcctgtcgaatcttttaaagaagttgcatttgaaagc
aaccatttattctgctttggttgccaaaaaacttttacgcaaaaggacaaaaaggtctat
atttgtggaaaatgtaatcaaacgttttgtttagattgtgagatatttattcatgaaatc
ttacacacatgtcccggttgtgcgacaaatcctgcaacatacaataaaaccacagataaa
tcttaa
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