Polyergus mexicanus: 138941910
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Entry
138941910 CDS
T10742
Name
(RefSeq) ATP-dependent DNA/RNA helicase DHX36-like
KO
K14442
ATP-dependent RNA helicase DHX36 [EC:
5.6.2.6
]
Organism
pmec Polyergus mexicanus
Pathway
pmec03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pmec00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
138941910
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pmec03019
]
138941910
03012 Translation factors [BR:
pmec03012
]
138941910
Enzymes [BR:
pmec01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
138941910
Messenger RNA biogenesis [BR:
pmec03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
138941910
Translation factors [BR:
pmec03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
138941910
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
OB_NTP_bind
HA2_C
HA2_N
AAA_22
nSTAND3
ResIII
NPHP3_N
NACHT
ATPase
AAA_14
NB-ARC
AAA_19
AAA_7
PhoH
AAA_16
ABC_tran
Sigma54_activat
AAA_23
Motif
Other DBs
NCBI-GeneID:
138941910
NCBI-ProteinID:
XP_070167968
LinkDB
All DBs
Position
Unknown
AA seq
923 aa
AA seq
DB search
MSNFSAQHNRKEQQMQLSASGSGGPYSQTRRLPPEFQVFRLLPHLEQRIKTILNNSKTFC
SPISDERSSFEYDDKYHHIHDSRFKRKFLEILNGDIEHNFTKATSMKSKLQRNSNVDRIL
LNEYKDKQVQNDYLNMLKFRLKLPAYHKKSEILQLIKDNQVVVISGETGCGKTTQVAQFI
LDDQLEAGNGSITRVVCTQPRRISAISIAERVAAERVEQLGKSVGYQIRLEKIPMREQGS
ILFCTTGILLQIMRTDPTLKSFSHVILDEIHERTTESDFIITLLTKIIPKRTDLKILLMS
ATLNSERFSKYYNECPMIHIPGFTYPVQEFYLEDVLSLTEFKFPEEEPTDYRKCLKDTRY
KHKKDEFLNIMQPYIEQLRTEMKYGEHVFNQLRNPNSENLSLKLIEVLVRYICNTKGPGA
ILIFLPGIMDISELNKMMLDPIYYPSDKYIIYPLHSRLPTIDQKLIFEKSPDDIRKIIIA
TSIAETSITIEDVVYVIDCGKTKLGRFDIKDNIQTLEPEWVSLATAKQRRGRAGRVKSGE
CYHLYYKVREMAFDQYPLPEMLRTRLEEVILKIKILQLGKAKEFLASVMDPPDLKAIDLS
LDLLRTLDALDKEEHLTSLGYHLAHLPLDPRTGKMILWAALFSCVKPIFAIAASLSFKDA
FYCPLGKEKEARQKKLELSMGENSDHIAFAEALRRFEVARQRGNAGKFCEEYFLSYNTLK
LLSEMKTQFAQCLYEMKFLSNNNPDDRNANRNSHNIALIKAIVYAGLYPNIAIISNITKY
ETIVVRTPEDGPVRVHPLSVNWKASNFASQYLTYFTKQRSTFIYLHDTTCISVPILLFTG
PNISIRREKGKCVISNPNFSAYITCKPQTAEMIQELHRALNSLLTYKMTHPATVVWSTFE
GQMLNTIIGLISQKDQKMGYNLQ
NT seq
2772 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaatttctctgcacaacacaatagaaaagaacaacaaatgcagttatctgcatct
ggatctggaggaccttactcacaaacacgaagacttccccctgaatttcaagttttcaga
ttattacctcatctagaacaaagaattaaaactattttaaataattctaagaccttttgc
agtccaatttctgacgaaaggtctagctttgaatatgacgataagtatcatcatattcat
gattcccgatttaaaagaaagtttttagaaattttaaatggtgatatagagcacaatttt
accaaggctacaagtatgaaatcaaaattgcagaggaatagtaatgttgacagaatatta
ctaaatgaatataaagataagcaagttcaaaatgattatctaaatatgttaaaatttcga
ttaaagttaccagcgtatcataagaaatcagaaatattacaattgattaaagataatcaa
gttgttgtcattagcggagaaactggatgtggcaaaaccacacaggtagcgcaatttata
ttggatgatcagttagaagctggaaacggtagtattactcgagtagtttgcacgcagcct
agaaggatttcagctatttccattgctgaacgtgtagctgcggaaagagtggaacagctt
gggaaatccgtgggctatcagatacgactcgaaaaaattccaatgcgggagcaaggaagt
atattgttttgcacaactggtatattactgcaaattatgaggactgatccaacattaaaa
agcttctctcatgtgatattagatgaaattcatgaacgtaccacggaaagtgattttatt
attacattattaacaaaaattattccaaaaagaacagatttaaaaattcttttgatgagt
gcaacattaaattctgaacgtttttcaaaatattataacgaatgtccaatgatacatata
ccaggattcacctatccagttcaagaattttatttagaggatgttttgtcacttacagaa
ttcaaattccccgaagaagaacctacagattatagaaaatgtctaaaggatacaagatac
aaacataagaaagacgaatttttaaatataatgcaaccttacattgaacaacttagaact
gagatgaaatatggagaacatgtttttaatcaattacggaatccaaatagtgaaaatttg
tcattgaaacttatagaagtgttagttaggtatatctgtaatacaaaaggtcctggagct
attcttatttttctacctggcataatggatatatcagaattaaataaaatgatgttagat
cctatatattatccatccgacaaatatatcatctatccgctccattcacgcttgccgacg
attgatcagaaacttatatttgaaaaatcacctgatgatattcgtaaaataatcattgca
acttccattgctgagacatcaataactatagaagatgtagtgtatgtaatagattgtggg
aaaacaaagctcggaagattcgatataaaagataatattcagactttagaacctgaatgg
gtatctttagctactgccaaacaaagacgcggtagagccggcagggttaaaagtggggaa
tgttatcacttgtattacaaagttcgagaaatggcgtttgatcaatatccattgccagag
atgttgagaacgcgcttagaagaggtgattttgaaaataaaaatcctgcaattaggaaaa
gccaaagagttcctagctagcgtcatggacccgccagatttaaaagccatcgatctgtct
ctggatttacttagaacacttgacgctctagacaaagaagagcatttgacttctttgggt
tatcatttggcacatctgccgcttgatcctagaacaggaaaaatgatcctctgggcggca
ctgttctcttgcgtcaaaccaatatttgctattgctgctagtctctcttttaaagatgct
ttctattgtccgctgggaaaagagaaagaagctcgtcaaaaaaagttagaactcagtatg
ggagagaatagtgatcatattgcttttgcggaagctctaagaagattcgaagttgcacgc
caaagaggaaacgctggaaaattctgcgaagaatactttctctcttacaacacattaaaa
cttctctccgaaatgaaaactcaatttgcacagtgtttatacgagatgaaatttctgagt
aacaataatccggacgatagaaacgctaatagaaattcacataacatagcattgataaaa
gccattgtttatgcgggattatatcctaacattgctattataagtaatattactaaatat
gaaactattgttgtccggacaccagaagatggaccagtacgtgtgcatccgttgagtgta
aattggaaagcttccaactttgctagtcaatatttaacatattttacaaagcaacgttct
acctttatatatttacatgatactacttgtataagtgttccaattttattatttactgga
ccaaatatatcgataagacgagaaaaaggaaaatgtgtaattagtaatcctaatttttct
gcatatattacttgtaaaccacaaactgcggaaatgatacaggaacttcatcgcgctcta
aactctttattaacatataagatgacacatccagcaacagtagtttggtcaacatttgaa
ggacaaatgttaaatacgatcattggattaatatcccaaaaggatcaaaaaatgggttac
aatttacaatag
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