Polyergus mexicanus: 138942279
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Entry
138942279 CDS
T10742
Symbol
Rpi1
Name
(RefSeq) DNA-directed RNA polymerase I subunit RPA1
KO
K02999
DNA-directed RNA polymerase I subunit RPA1 [EC:
2.7.7.6
]
Organism
pmec Polyergus mexicanus
Pathway
pmec03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
pmec00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
138942279 (Rpi1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pmec03021
]
138942279 (Rpi1)
Enzymes [BR:
pmec01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
138942279 (Rpi1)
Transcription machinery [BR:
pmec03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
138942279 (Rpi1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_1
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-GeneID:
138942279
NCBI-ProteinID:
XP_070168513
LinkDB
All DBs
Position
Unknown
AA seq
1694 aa
AA seq
DB search
MRKYYKQRLTPKHQDSQHLLFSVFTANDIRNLSVTKIRTPLSFNILGHPLKGGLYDPSLG
TTKNNFELCSTCGYNSSKCPGHFGHIELPVSVVNPLFHKGLSTLFKLSCFSCFTFQIPSY
MKTLLSARLNLLYQGQLADLETLDQEINYVKSNVQKTEEQTEYICDVIEIYMQNFFNKTR
FGQPMTENHEYKSNIKNVNTQWHTYVEYILKQYVRNKVGICINCNNVLPKITTLQNKIMI
SNKGAPKEILSHEVIHKLDTVMIMPDQSKEYMRRLWNNERNFLQIIIPCLELVDIEYPTD
IFFFEVVPVLPPIVRPVNFINGQMIEHPQTHIYKSIIQDCLVLRNIIQTIQDGGTDHLPQ
EGRLVFEQIRGHTAVEKLHNAWQMLQSNVDHLMDRDINRTPESINGLGLKQILEKKEGII
RMHMMGKRVNFAARSVITPGPDLNIDEIGIPEAFARKLTYPTAVTPYNVVELRRLVLNGP
DVHPGAVIIENENGSIQAINSNDSMQREAIAKRLLTTSDRTNESFSGIKIVHRHLQNGDV
LLLNRQPTLHKPSIMAHKARVLKGEKTLHLHYANCKAYNADYDGDELNAHFPQNELARSE
SYNIANVSNQYLVPKDGTPLSGLIQDYMISGVQLTTRGRFFSRTHYTQLIYAALSMIQGD
IILSPPTIIKPKSLWSGKQIISTIIINIIPSHKARINLISNTKINVKEWQVESPRHWKCG
TEFKNPMTMSEAEVIIRHGELLCGVLDKMHCGATSYGLIHCIYELYGETYASKMLSAFAK
LFQTFLQYNGFTLGVDDILINHRIDKKRKEIISNCRKVGEDIQKSVVKIPDNIFIDELKN
KIEESYWDNPKFRAQVDHKYKSVLDVYTNDINKTCLQIGLFKKFPNNNLQLMVQSGAKGS
MVNTMQISCLLGQSELEGKRPPLMISGKSLLSFPAYDPTPRAGGFIENRFMTGIKSQECF
FHCMAGREGLVDTAVKTSRSGYLQRCLVKHLEGLVVGYDATVRDYDGSLIQFYYGEDGLD
IPGSRFLRKEQIEFLVDNKNAIIDSKLLEYLKTDNKEIIKMMKKIKKWENKNGSSLQKKR
INEFTKFSIENQNNSLKRRSIDSHSGRSKAALSLIRKWIRATEEVKETFRTQCVKCPDPV
SSKYRQDVEFGVLPERIEGLIDEYLSRCSKIKKSNLRDLLSIKVIKTICPPGEPVGLLAA
QSIGEPSTQMTLNTFHFAGRGDMNVTLGIPRLREILMLATKNIKTPSMEIPFQNNLQNLE
KQAKKLRLKLTKCVLRDILKDITISRRMEEDSHRKLVHTITIEYLPYKSYKGEFSIRPQD
AIKRTEKIFFMNIFKEIQKLAKASKVLLHFEGEKRRASDEDAVIDELDPDGTMPENETER
RIKMDLGEMHESSDEEEVAEDADATMSKSLSRHQENQEYEDSEEEEEEEVEDVINDKEEE
ANNNNNANKNSESKEDNEENDDYRERLNNKKNDTYSYRKKCIIDMYEYAIDYDYDESKLS
WCKFTFWLPLKMIKLDLPTIIRNAADKTVLWETPYIKKAFIFQNSENETILKTDGLNIVE
MFKYDNILNLNRLYSNDIHNISQTYGIEAANKVIVREIRDVFKMYGITVDFRHLALIADY
MTFDGTFQPLSRKGMENSASPLQQISFESSLAFLKSATLQGKKDDILSPSSRLMLGQPCK
SGTGAFSVLPSLYM
NT seq
5085 nt
NT seq
+upstream
nt +downstream
nt
atgaggaaatattataagcaacgtctaacaccaaaacatcaagactcccagcatttatta
ttctcagtgttcacagcaaacgatataaggaatttaagtgtaacaaaaatcaggacacct
ctatcttttaacattcttggacatccactaaagggtggactatatgatccatccttaggc
acaacaaaaaataattttgaactatgtagcacatgtggatataatagctccaagtgtcca
ggtcactttggacacatagaattgccagtatctgttgtcaatccattatttcacaaagga
ttatccacattgttcaaattgtcttgcttcagttgttttacttttcaaataccatcatat
atgaagacattattgtctgcaagattaaacttgctttatcaaggacaacttgctgatctt
gaaactttagatcaagaaataaattatgtaaaatcgaatgttcaaaaaacagaagaacaa
acggagtatatttgtgatgtaatcgaaatttacatgcaaaactttttcaataaaaccaga
ttcggtcagcctatgactgagaatcatgagtataaaagcaacataaagaatgttaataca
cagtggcatacctatgttgaatatatacttaaacaatatgtcaggaacaaagttggaata
tgcattaattgtaacaatgttctaccgaaaattacgacattgcaaaataaaataatgata
agcaataaaggagcccctaaggaaatattgtcgcatgaagtaattcataaattggataca
gtgatgattatgccagatcagtctaaggaatacatgcgacgattatggaataatgaaagg
aattttcttcagataattataccctgcttagaattagtagatattgaatatccaactgat
atattctttttcgaagtagtacctgtgctaccacccattgtgcgaccagtaaattttatt
aatggccaaatgatcgaacatcctcaaactcatatttataaaagcattatacaggattgt
ttggtcttaagaaatattatacaaacgattcaagatggaggtactgatcacttacctcag
gagggtcgacttgtttttgaacaaatcagagggcatacagcggtcgaaaaattacacaat
gcctggcaaatgttgcaaagcaatgttgatcatctgatggatcgtgacataaataggact
ccagaatctatcaatggtctaggcttgaaacaaattctcgagaaaaaagaaggtatcatt
agaatgcacatgatgggtaaaagagtgaattttgccgcacgttcggtcatcactccaggt
cctgacttgaatatcgatgaaatcggcattcccgaggcttttgctcgaaaattaacatat
cctacagctgtgacaccatataacgtcgttgaattgcgacgattagttttaaacggacct
gatgttcatcctggggcggttataatagaaaatgaaaatggatcaatacaagccataaat
agtaacgattctatgcaaagagaagctattgcaaaacgtcttttaaccacaagcgacaga
accaacgaatccttcagtggcattaaaatagtacatcgacatcttcaaaacggcgatgta
ttgttattaaataggcaaccgacgttacataaaccgagtataatggctcataaggcacgt
gttcttaaaggagaaaaaacattgcatcttcattatgcaaactgtaaggcatataatgca
gattacgatggagatgaacttaacgctcattttccacaaaacgaactagctagaagtgaa
agttataatatagctaatgtaagtaatcaatatcttgtaccaaaagacggaactccgtta
agtggtcttatacaagattacatgatatccggggtacaattaacgactaggggtcgattt
ttctcacgaactcattatacgcaattaatttacgccgcactctcgatgatacaaggagat
ataatcctctcaccaccaactattatcaaaccaaaatctctatggtcgggtaaacaaatt
atttcaaccattataattaatattattccttcgcacaaggcacgaattaatctaatctct
aatacaaaaattaatgtaaaagaatggcaagtagaatcaccacgacattggaaatgtgga
acagaatttaaaaatccaatgactatgtcggaagctgaagttataattcggcacggagaa
ttattatgcggagtacttgataaaatgcactgtggtgcgacttcttacggtcttattcat
tgtatttatgagttatatggggaaacgtacgcgagtaaaatgttaagtgcatttgccaaa
ttgttccaaacgtttctacagtacaatggatttactctaggcgttgacgacattctgata
aatcatagaatcgacaaaaaacgtaaagaaataatttctaattgccgaaaagttggagaa
gatatacaaaaatctgttgtaaaaatacctgataatatatttattgatgaacttaaaaac
aagatagaagaatcttattgggataatccgaaatttcgcgcacaagtcgatcataagtac
aagagcgtgttagatgtttatactaatgatattaacaaaacgtgtctgcagataggactc
ttcaaaaaatttccaaataataacttacagcttatggtacaatctggtgcaaaaggatcc
atggttaatactatgcaaatatcgtgtttacttggccaaagcgaattggaaggtaaaagg
ccgccattaatgatcagtgggaaaagtttattaagtttcccagcatatgatccgacacct
agagccggtggtttcatcgaaaatagatttatgactggtattaaatctcaggaatgtttt
ttccattgcatggcaggacgcgaaggtcttgttgatactgcggtaaaaactagtagatct
ggttacttacaaagatgtcttgtgaaacatctagaaggattggttgttggttacgatgcg
acagtaagagactatgatggtagtttaattcaattttattacggagaggatggccttgat
ataccgggttcgcgattcttaagaaaagaacaaatcgaatttctggttgacaataaaaat
gctattatagactcaaaattattggaatatctaaaaacggataataaagagattataaaa
atgatgaaaaagatcaaaaaatgggaaaataaaaatggctcttctttacaaaagaaaaga
attaacgaatttactaaattctctattgagaatcaaaataatagtttgaaaagaagaagc
atcgatagccatagtggaaggagtaaagccgcattatcgcttatacgaaaatggataaga
gcgacggaagaagtgaaagagacatttcgtacacaatgtgttaaatgtcctgatccagta
tcatcaaaatacaggcaagatgttgaatttggtgtattaccagaacgaatagaaggctta
atagacgaatatctttctcgttgttcgaagattaaaaaatctaatttaagagatttgtta
tccattaaagttataaaaaccatttgtccacctggtgaaccggttggtttgttagcagcg
caatctataggcgaaccatccactcaaatgaccttgaatacatttcattttgctggacgt
ggtgacatgaatgtgactctaggtattcctagattacgtgaaatcttaatgttggcaacg
aaaaatataaaaactccaagtatggaaataccctttcaaaacaatctgcaaaatcttgaa
aagcaagcaaaaaagctaagattaaaattaacaaaatgtgtcctgcgtgatatattgaag
gatatcacgataagtaggagaatggaagaggattcgcatagaaaattagtgcacactata
acgatcgaatatcttccttataaatcttataaaggggagttttctattcgcccacaggat
gcaattaagcgcactgagaaaattttttttatgaatatatttaaagaaatccaaaaactc
gccaaagcaagcaaagttttattacatttcgaaggagaaaaaagacgggcaagcgacgag
gatgcagtaatagatgaacttgatcccgacggcacaatgccggaaaatgaaactgaaaga
agaataaagatggatttaggagagatgcatgaatcatctgatgaagaagaagttgcagag
gatgctgatgcgacaatgagtaaatcattatcgcgtcatcaagaaaatcaagaatatgaa
gattcagaagaagaagaagaagaagaagtggaagatgttataaatgataaggaggaagaa
gcaaataataataataatgcaaataaaaactcagaaagcaaggaagataatgaagagaat
gatgattatagagagagattaaataacaagaaaaatgacacatattcttacagaaaaaaa
tgcatcatagatatgtatgagtatgctatcgattatgattatgatgaaagtaaattatca
tggtgcaaattcacattttggttaccacttaaaatgatcaaattagatttgccaacaata
attagaaatgctgcagacaaaactgttttatgggaaacaccatatatcaagaaagctttt
attttccaaaatagtgaaaatgaaacaattctcaaaacagatggtttaaatatagtagaa
atgttcaagtatgataacatacttaatttaaataggttatactccaatgacattcataat
atttctcaaacatatggaatagaagctgcgaataaagttattgtgagagaaattagggac
gtcttcaagatgtatggtattactgtagattttaggcatctagccttaattgccgattac
atgacatttgatgggacatttcaaccacttagtcggaaaggaatggaaaattctgcttca
ccattacagcaaataagttttgaaagttcgctagcttttttgaaaagtgcgacattgcaa
ggaaaaaaggatgacatattatcaccgtcaagtagactgatgttaggacaaccatgcaaa
tctggtactggagctttctccgtattaccatcattatatatgtaa
DBGET
integrated database retrieval system
