Polyergus mexicanus: 138942332
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Entry
138942332 CDS
T10742
Symbol
Vps16a
Name
(RefSeq) vacuolar protein sorting-associated protein 16 homolog
KO
K20180
vacuolar protein sorting-associated protein 16
Organism
pmec Polyergus mexicanus
Pathway
pmec04140
Autophagy - animal
pmec04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
pmec00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
138942332 (Vps16a)
04148 Efferocytosis
138942332 (Vps16a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pmec04131
]
138942332 (Vps16a)
Membrane trafficking [BR:
pmec04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
138942332 (Vps16a)
Hops complex
138942332 (Vps16a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vps16_N
Vps16_C
Beta-prop_WDR19_1st
Beta-prop_Vps41
YlzJ
Motif
Other DBs
NCBI-GeneID:
138942332
NCBI-ProteinID:
XP_070168587
LinkDB
All DBs
Position
Unknown
AA seq
831 aa
AA seq
DB search
MSAMLTADWFPLGRDVYFRKFELYPISFQQEISVNNLLVAAPYGGSIAVTRNPTKLVKVQ
GASKPLILLYTASGKLTARLQWSSGQLISFGWSQQEELLCVQEDGMVLIYDMFGTYQHTF
SMGNAAKDTKVIDAKFFATSNSTGIAVLTSTNRIFLVNNVSEPKVRPVTDMPRYGGPIDC
WCMVHCDRETEVILSNREGIFVICQSHQNTFSFNNLFSNKINNVVAMTVSGNYRHIALYA
DTGHLYIGSIDFREKYCECYTNMKESLANIAWCGTEAVICSWDSAIMVVGRTAETIVYNY
DGPVHLVTEIDGVRVLSSCSHEMIQKVPNVVQRIFRINSTDPASYLLEASKQFQKKSHKA
DSYIDLVKDKLDSAIKACIDGASHEFDFETQKILMRAAKFGKGFSKKMDPEYYVQMCRTL
RVLNAVRHPAVGIPLTYTQYNVLTNQVLLDRLVVRRHYYLSIQIARHLQLPEIDGESRIL
AHWACYKVKQTQLDKEQIAEEIADKLGYAPGVSYSEIARKAADCGRKQLAIKLIDYEPRA
HQQVPLLLTLSEERAALHKAVESGNTDLVYTVILHLRENMTLGDFQMSIMHCPLAMALYI
KYCQSHNRETLRDIYNQYDDFHSQAVWFITESYQRKNTMSKDALLQSAQENFRLARNDTN
ASLTEEQIKLLKYQRSLEDTLHESVIGKPLHDTVKILLLHNELKLADKLRSEYKIPDRRY
WWLKMQCLAEQGLWSDLEKFSKSKKSPIGYEPFIDECLKYNEKLEARKYLIRVKDDLKVK
YLVKLNMLSEAAKTAFDQKDTSALTFVLAQCGSTDKQLVDKINMYLASFKN
NT seq
2496 nt
NT seq
+upstream
nt +downstream
nt
atgtcggctatgttgactgctgattggtttcctttaggacgagatgtatactttcgcaaa
tttgagctgtacccgatatccttccagcaggaaatttctgttaacaatttattagtggca
gctccttatggaggttccattgctgtaacgagaaatcccacgaagcttgtcaaagttcaa
ggagccagcaagcctctaatattgctgtacacagcgtcaggaaaattgacagccagattg
caatggagcagtggacaattgatatcatttggctggtctcaacaggaagaattgttgtgc
gtacaagaggatggcatggttttgatatatgacatgtttggaacttatcaacatactttt
agcatggggaatgcagctaaggatactaaagttattgacgcaaaattctttgcaacatcc
aatagtactgggatagctgttttgacatccactaatcgcatatttttggtgaacaatgta
tccgagcctaaagtccgaccagttaccgatatgccaagatatggtggaccaattgattgt
tggtgcatggtacattgcgatagggagacagaggtgattttatcaaacagagaaggaata
tttgtaatttgtcaatcccatcaaaacacattttcatttaacaatctcttcagcaataag
attaataatgtggtagcaatgactgtatctggtaattatcggcatattgcactctatgct
gacactggacacttgtatattggttcaatagatttcagagagaaatattgtgaatgctat
acaaatatgaaggaatctttggcaaatatagcctggtgtggtacagaagccgtgatatgt
agctgggacagtgcaataatggttgtaggacgtacagctgagactatagtgtacaattac
gacggtccagtacatttggttacagaaatcgacggagtacgtgtactttcgagctgctcc
catgaaatgatacaaaaagtaccaaatgtcgtacaaagaatatttagaattaactcgacg
gatcccgcttcgtatctcctggaagcctctaaacagtttcagaaaaagagtcacaaggct
gacagttacatagatctagtgaaagataaactagactcggcgataaaagcgtgcatcgat
ggagcgagtcatgaattcgattttgaaacccaaaagattttgatgcgtgctgccaagttt
ggaaaaggattcagcaaaaaaatggatccggaatattatgttcaaatgtgcaggactttg
agagtcttgaatgcagtgagacatcctgctgtgggcattccactaacatatacacaatat
aatgttcttacaaatcaagtactattagacagattagtagtgcgaagacattattattta
agtatacaaatagcgcgccatttgcaattacctgaaattgatggggaaagtagaatactg
gcacattgggcttgctacaaggtaaaacaaacgcaattagataaagaacaaatagcagag
gaaatagctgataaattaggatatgctcctggtgtttcatatagcgaaattgcgaggaag
gcagcagattgcgggcgaaaacaattggctattaagttaatcgattatgaaccgcgtgcg
catcaacaagtacccttgctgttgacgctcagcgaagagcgagccgctctacacaaagct
gtagagagtggtaatacggatttagtttacactgtcattcttcatcttagagaaaatatg
actcttggagattttcaaatgtctataatgcattgtcctctagcaatggcattatatatt
aagtattgtcaaagtcacaatagagagacattacgtgatatttataatcagtatgatgac
tttcattcacaagcagtatggtttatcactgaaagttatcaacggaaaaacaccatgtcg
aaagatgctttgctgcagtctgcacaagaaaatttcagattggctcgtaatgacaccaat
gcatcactaacagaagaacagataaagttattgaagtatcagagatctttagaggataca
ctacacgaatcagtcattggaaaacctctacacgatactgtaaaaatattattattgcat
aatgagttgaaattggctgataaattacgatcagaatataaaataccagatcgaagatat
tggtggttaaagatgcaatgtttagcagaacaaggtctgtggagtgatttggaaaaattt
tccaaaagtaaaaagtctcccatcggctatgagccatttatagacgaatgtctcaagtat
aatgaaaaattagaagcaagaaaatacttaatcagagttaaagatgatctcaaagtgaag
tatctagtaaaattaaatatgctgagtgaagcagcgaaaacagcctttgatcaaaaagat
acgtcggctcttacatttgtgctggcgcaatgcggatcgacagataaacaattggtggat
aagataaatatgtatctagctagttttaaaaattaa
DBGET
integrated database retrieval system
