Polyergus mexicanus: 138942556
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Entry
138942556 CDS
T10742
Symbol
Soxn
Name
(RefSeq) transcription factor Sox-2 isoform X1
KO
K16796
transcription factor SOX2 (SOX group B)
Organism
pmec Polyergus mexicanus
Brite
KEGG Orthology (KO) [BR:
pmec00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pmec03000
]
138942556 (Soxn)
Transcription factors [BR:
pmec03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
138942556 (Soxn)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HMG_box
SOXp
HMG_box_2
HMG_WDHD1
TFIIA
DDHD
Motif
Other DBs
NCBI-GeneID:
138942556
NCBI-ProteinID:
XP_070168962
LinkDB
All DBs
Position
Unknown
AA seq
514 aa
AA seq
DB search
MLTMETDMKGGNLHAQMPPHPHQGVSPMGHHTGMSPYGTLGSIVHSPALSGSPPSAGGLS
LGLQHHHQTAQHHYSSMVTAAAVQQQQQNMHAMAAQQSAQQQQQQQQQQQQQQHHHSHQQ
QQQSQSQQHHQPNNHSNPNNPNNPNNSANAKNNNMDRVKRPMNAFMVWSRGQRRKMAQEN
PKMHNSEISKRLGAEWKLLSESEKRPFIDEAKRLRAVHMKEHPDYKYRPRRKTKTLLKKE
KFPLAGGVTGVGGMLVDQRQVVTSGGPQQPQLPRDVYQMSNGYMPNGYMMHDPTAAYQQH
VAYGGHMGNAAAAAAAASAAAYPRYDPMSHHMGGGSPSPINNYMNGYGGYGGTTVPGGSP
SPYHQAQPGSQMSSHSPSGSSIKSEPTSPASGGIHTPTPTAGPTSTSAAAVANQAVKREY
MGQQQTSQQTSQGDHLRHMISMYLPHGPDQPGAGVYSPGPSPDSLQHHAIQPLSHMSDSD
RKMLNPETGCYSESVRAWDWNATGNVRVQESWPT
NT seq
1545 nt
NT seq
+upstream
nt +downstream
nt
atgctcacgatggagacggacatgaagggcggcaatctgcacgctcagatgccaccgcat
ccgcaccagggcgtatcgccgatgggtcaccacacggggatgtctccttacggtactctc
ggctcgatagttcacagcccggcgctatcgggaagtccgcccagcgcgggcggtctaagt
cttggtcttcagcatcatcatcagacagctcagcatcattatagttcgatggtaaccgcc
gccgctgttcagcaacagcagcaaaacatgcacgcaatggcagcgcaacaaagtgctcag
cagcagcagcagcagcaacagcagcagcagcagcagcagcaccatcactctcatcaacaa
cagcaacagtcgcaatcgcaacagcatcatcagcctaataatcatagcaatccaaataat
cccaacaaccctaacaactctgccaacgctaagaacaacaatatggaccgcgtgaagagg
ccgatgaacgcctttatggtatggtcgcgcggtcagcggcgcaagatggctcaagaaaat
ccgaaaatgcacaactctgagatctcgaaacgcctcggcgccgaatggaaactcctgagc
gagtcggaaaagcgtccgttcatcgacgaggcgaagcgactgcgcgcggttcatatgaag
gaacatccggattacaaatatcggccacgacgcaagacaaagacgttactcaagaaggaa
aagtttccgctcgctggcggcgtcaccggtgtcggcggtatgctcgtcgatcagcgacaa
gttgtcaccagcggcgggccgcagcagccgcaattgccgcgcgatgtctatcaaatgtcc
aacggttacatgcctaacggttacatgatgcacgatccaacagccgcgtaccagcaacac
gtcgcatacggcggtcacatggggaacgccgcggcggccgctgctgcagcctcggctgcc
gcctatcccaggtacgatcccatgagccatcacatgggcggcggtagtcccagccctatt
aacaactacatgaacggatacggcggatacggcggtaccactgtacccggcggctcgccg
tcaccttatcaccaggctcaaccgggctctcagatgtcgagtcatagtccgagcggcagt
agcataaaatccgaaccgacgagcccggcgagcggcggcatccacacgccgacgccgacg
gctggtccgacatcgacgagcgcggctgcggtcgccaatcaggccgtcaagcgggagtac
atgggccagcagcaaacgagccagcaaacgtcgcagggcgaccacctcaggcacatgatc
tccatgtatctaccacacggccccgatcagcccggtgcgggcgtctactcgccgggaccg
tcgccggactctctgcagcatcacgccatacaaccgctctcgcacatgtcagatagcgat
cgtaaaatgttgaatccagaaaccggctgctactcggaatccgtacgagcatgggattgg
aacgcgacgggcaacgtacgcgtgcaggaatcctggccgacgtga
DBGET
integrated database retrieval system
