Polyergus mexicanus: 138943183 Help Entry 138943183         CDS       T10742                                  Name (RefSeq) collagen alpha-1(II) chain   KO K19719   collagen type II alpha Organism pmec  Polyergus mexicanus Pathway pmec04512   ECM-receptor interaction Brite Glycosaminoglycan binding proteins [BR:pmec00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    138943183 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  Collagen COLFI Motif Other DBs NCBI-GeneID:  138943183 NCBI-ProteinID:  XP_070169867 LinkDB All DBs Position Unknown AA seq 1509 aa AA seqDB search MRRQILELVTGLLVIQLLLLPDQVNAVRNRPRKQRSRSEQPQSQQPVTDYNYDYYENYDD YEEKNETTTLSPPVIPSSSIQVSGLSTSSIESTVSSYRPEKPTDLPAPTTTLFYNRELEQ TNATHEKDHSVPSTEILPGESNVYSSVAIPGPRGEPGRPGDAGRPGDSGYPGQPGNPGIP GPPGLPGVVPDVSLYYQQLALSQANQDKGPTGSAASLYGPEAYPYIQAQVGPIGPRGPPG PAGAPGPQGFQGTRGEAGEPGSPASPGTPGPRGLPGLPGKDGTSGEDGETGPPGSPGTVG PRGLSGMPGLPGIKGHRGFPGLDGAKGEQGISGEKGSIGTPGSMGPIGPMGPAGPRGERG REGSPGSPGLRGLDGIVGPPGPPGAVGKLGSPGFPGIPGLKGDQGSPGPKGSQGLQGPRG ESGRPGQPGETGSQGAKGKDGSPGEKGDTGAIGSVGLPGLPGASGQPGASGNPGIPGAKG AVGFPGERGFKGDSGVKGDTGMQGPRGLPGPPGNEGKRGNRGMRGSIGAAGPPGERGAPG MRGLPGPDGPVGPHGQPGDRGPAGAIGPKGSTGDPGRPGPPGLQGLRGLMGRPGASGKPG NPGERGIQGADGKPGEQGPPGPQGLSGPLGVPGERGYPGESGKDGEPGNPGSPGPRGDTG KEGPPGVQGPPGSSGNDGTRGSPGSIGPRGFQGLPGATGNPGVSGKDGEPGVQGPPGLPG LVGNRGERGIPGERGLMGLPGSMGPRGETGAQGVDGLTGLPGSKGEKGNFGAPGLLGLPG ARGLSGEPGQKGERGAFGPVGPEGLPGHIGERGLQGEVGPPGPPGEPAERGDPGPPGLIG EPGAPGNPGERGLQGLQGSPGFPGQQGLIGLPGLKGDRGYPGLKGEQGNPGLSGSPGEVG SPGPIGLTGAKGIRGESGARGEPGLMGPPGIAGQIGPAGLPGNIGSPGAPGLPGAKGNAG DSGRPGTPGPIGNPGLSGVDGNKGESGSPGSQGPAGPQGSQGPSGERGLPGLPGSPGSIG NRGLRGVPGETGQSGKPGVEGPPGPSGLIGPPGPPGHMGEAGPEGPIGKPGPPGIGGRPG DKGPPGIPGAAGQSGSPGLPGPPGSTGSTGPAGERGPKGEAGPQGVEGPQGPRGKPGPAG LEGAKGDRGEEGPKGIKGHRGFNGLQGLPGSPGLPGEKGMPGLSGPSGKDGEPGIRGSPG REGSPGPIGPAGNSGLRGPPGEEGRHGPPGLPGPPGPPGPPGEVGFGYDTASLAAFLAQG QTKGPDPLGDEPPRIFSKDITEGERRELLTKAYENLKSSFQKLVKPDGEKNSPAKTCRDL FIAYPDKLSGEYWIDPNEGDVRDAILVHCDAEKRATCILPSPARSAEITHITDQQETWLS EIDSGTKITYKADNNQINFLQLLSKHAQQNITYHCKNSVAYFDYERKTYRKSLKLLAWND VELTPRGNQRLRYEMITDECRLHQNHWGKTVISYETEKPIRLPILDVALRDIGKPEQSFS VEIGAACYQ NT seq 4530 nt NT seq  +upstreamnt  +downstreamnt atgaggcggcagattctagagctggtcacgggactcctcgtgatccagctgctgctgctg ccagatcaagtaaacgctgtgagaaatcggcccaggaaacaacggtccagatcagagcaa ccgcagtcgcagcaacctgttaccgattacaattacgattattatgagaactatgacgac tacgaagaaaagaacgagaccacaacattgtcacctcctgtgataccatcatcaagcata caagtttcgggattgtccacatcgtcgatagaaagtacagtgtcttcgtatagaccagaa aaacctacagatttgccagctccaacgacaactttattttataatcgtgagttagagcag actaatgccacacacgaaaaggatcattcagttccgtccacggaaattttaccgggtgaa agtaacgtatacagttctgtggcaatacctggtccacgaggtgaacctggtcgacctgga gatgctggtcgtccgggtgattcaggatatcctggacaacccggaaatcccgggattcca ggaccacctggtcttccaggagttgtacctgatgtatctctatattatcaacaattggct ttgtctcaagcgaatcaagataaaggcccaacgggttcagctgcgtcattgtatggacca gaagcatatccttatattcaagcgcaagtaggccctataggtccacgaggtcctccaggt ccagccggtgctccaggtcctcaaggtttccaaggtacacgcggtgaagctggtgaaccg ggatctccagcttctcctggtacgccaggtcctcgaggtttaccaggattacctggaaaa gatggtactagtggagaagatggtgaaaccggtccgccaggatcacctggtaccgtaggg ccacgtggtctttcaggtatgcctggacttccaggaataaaaggccatcgtggttttccg ggtctagacggagcaaaaggtgagcaaggaatttctggtgaaaaaggatctataggcaca ccaggatcaatggggccgataggtccaatgggtccagcggggccgcgtggtgagaggggc agagagggttcacctggctctcctggattgagaggccttgatggaattgtgggaccgccc gggccacccggtgctgtgggtaaacttggctcaccaggttttccaggtattcctggactt aagggtgatcaaggatcaccaggaccgaaaggaagtcagggtttgcaaggcccgcgaggc gaaagtggtcgtcctggacagcctggcgaaacaggttcgcagggtgctaagggcaaggat ggaagtcccggcgagaaaggagataccggagcgataggatcggttggtttacctggactt ccgggtgcttcaggtcaacccggagcatcgggcaatcctggtattcctggagccaaagga gcagttggctttcctggtgaaaggggttttaaaggcgattctggcgtgaaaggtgacaca ggaatgcaaggtccgcggggacttccgggacctcctggaaacgaaggcaagagaggcaac agaggaatgcgtggatcgattggcgccgcgggacctcctggagaacgcggtgcacctggg atgcgtgggcttcctgggccggatggtcctgttggacctcatggacaaccgggtgatcgt ggtccagcaggagctattgggccgaaaggatccactggggatcccggacgacctggaccg ccaggattacaaggtttgcgcggtttaatgggtagaccaggagcttctggaaaaccgggc aatcctggcgaacgtggaattcaaggtgcagatggcaagcccggagaacaaggtccgcct ggaccgcaaggtctatcaggaccattaggagtgccaggagagagaggatatcccggagaa tctggaaaagacggtgaacctggcaatccggggtcgcccggtccaaggggagatactggt aaagaaggacctccgggagtacagggcccaccaggttcatcaggaaacgacggcacgcgt ggttctccgggttcaatcgggcccagaggttttcaaggtcttccaggcgccaccggtaat ccgggtgtttcaggcaaggacggagaaccgggagtacaaggacctcccggtctgccagga ttagtcggcaacagaggtgagcgaggaattccgggcgaaagaggacttatgggacttcca ggatctatgggtccaagaggagaaaccggagctcaaggcgttgatggtcttactggatta ccaggatctaaaggagaaaaaggaaatttcggtgcaccgggattgttaggacttcctggt gcaagaggattatccggagaacctggtcagaaaggagagagaggagctttcggaccagtt ggccctgaaggtctaccaggacacattggagaacgtggtttacagggagaagttggacct cccggccctcccggggaaccagcggaacgaggtgatccgggtccacctggtctcattggc gaacccggagcacctggcaatccaggagagagaggtcttcaaggattgcaaggctcgccg ggttttccaggtcaacaaggattaatcggacttcctggtctaaagggtgatcgtggatat ccgggtttaaagggagagcaaggaaatccagggctatctggcagtcctggcgaagttgga tcacctggacctattggacttaccggtgctaaaggaattagaggtgaatcgggtgcacga ggtgaacctggtttaatggggccacctggtatcgcgggacagatcggtccagcgggccta ccaggaaatataggatcacctggtgctccaggattgcctggtgccaagggcaacgcgggc gattctggacgtcctggaactccaggtccgatcggtaatcctggtctatccggagtagat ggaaataaaggcgaaagtgggtccccaggttcccaagggccggccggtcctcaaggatca caaggtccatccggcgagagaggcttgccaggcttacccggttctcctggttctatagga aataggggattacgcggggtgcctggtgaaacaggacaatctggaaaaccgggtgtagaa ggtccacccggaccttccggattaataggtcctcctggtccgcctggtcatatgggagag gcaggaccggaaggaccaattggaaaaccaggaccaccaggaataggtggccgacctggt gataagggaccacccggaatacctggtgcagcaggccagtctggttcacccggattacca gggcctcctggatctacaggatctaccggaccagctggagaacgtggtccgaaaggcgaa gcgggaccgcaaggagtagaaggtccacagggtccacgaggaaaacccggtccagcaggc ctcgaaggcgcaaagggcgatcgcggggaagagggaccgaaaggaataaaaggacatcgc ggtttcaatggtttacaaggattgccgggatctcctggtttaccaggggaaaaaggtatg ccaggtctgtcaggaccttctggtaaagacggggagccaggtattagaggtagtcctgga cgggaaggcagcccagggcctattgggcctgcgggaaattctggattaagaggtccacct ggagaggaaggtcgtcacggcccgccgggtcttccaggaccccctgggccacctgggcct cctggagaagttggttttggttacgataccgcgtctttagcagcatttttagcacaaggt caaactaaaggaccagatccactcggtgatgaaccaccgagaatatttagtaaagatatt actgaaggagaacgaagagaattacttacgaaagcatatgaaaatctaaagtcatcgttt caaaaattagtgaagccagatggcgaaaagaattcgccggccaaaacctgtcgggatcta ttcattgcctacccggataaattatctggcgaatattggattgatccaaacgaaggagat gtccgagacgcaattttggtgcactgtgatgctgagaaacgtgcaacttgcattttaccg agtcccgctcgttcagcagaaatcactcatatcactgatcaacaggagacctggctgagc gagatagatagcggcacgaagattacatacaaagcggataataatcagatcaatttctta caattgctctcgaaacacgcgcaacagaatattacgtatcattgtaaaaacagtgtcgct tacttcgattatgagcgaaaaacatatagaaagagcttaaagcttctggcttggaatgac gttgaattgacaccacgtggtaatcagcgtcttaggtacgaaatgataacagacgagtgt aggcttcatcaaaaccattggggtaaaactgtgatttcatacgagacagaaaaacccata agacttcccatcttagatgtggctttgcgagatatcggaaaacccgaacaaagcttctcc gttgaaatcggcgcggcttgttatcaataa

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