Polyergus mexicanus: 138943253
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Entry
138943253 CDS
T10742
Symbol
Rdl
Name
(RefSeq) gamma-aminobutyric acid receptor subunit beta isoform X1
KO
K05181
gamma-aminobutyric acid receptor subunit beta
Organism
pmec Polyergus mexicanus
Pathway
pmec04080
Neuroactive ligand-receptor interaction
pmec04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
pmec00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
138943253 (Rdl)
04082 Neuroactive ligand signaling
138943253 (Rdl)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pmec04040
]
138943253 (Rdl)
Ion channels [BR:
pmec04040
]
Ligand-gated channels
GABA-A
138943253 (Rdl)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
Motif
Other DBs
NCBI-GeneID:
138943253
NCBI-ProteinID:
XP_070169991
LinkDB
All DBs
Position
Unknown
AA seq
568 aa
AA seq
DB search
MTTMGSFHAASGSLVLLAATAVLLPATHRAPFAYAATGGGSMLGDVNISAILDSFSVSYD
KRVRPNYGDLLTFDFRSSRRGGRHHVRLEYQLPIRSENGPPVEVGVTMYVLSISSVSEVL
MDFTLDFYFRQFWTDPRLAFKQRTGVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTS
NEFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNAGL
QSVGISNEVELPQFRVLGHRQRQTTIHLSTVGYTMRDIRYKWNEGPNSVGVSNEVSLPQF
KVLGHRQRAMEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNA
TPARVALGVTTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLLEYATVGYMA
KRIQMRKNRFQKIAESMKAASENPGPPRVPGDHGDHAPKQTWSHVVQEVRFKVHDPKAHS
KGGTLENTINGRADEETAGAPQHIIHPGKDITKLYGMSRPCITPSDIDKYSRIVFPVCFV
CFNLMYWIIYLHISDVVADDLVLLEEAK
NT seq
1707 nt
NT seq
+upstream
nt +downstream
nt
atgacaaccatggggtcctttcacgccgcatccgggagcctcgttctcctcgcggccacg
gccgttctgctgcccgccacgcatcgcgctccgtttgcatacgctgcaactggcggcggc
agtatgctgggcgacgtgaacatttctgcgatactagattcattttccgtcagttacgat
aaaagagtaaggccgaactacggagacttactaaccttcgatttcaggtcctcccgtcga
ggtgggcgtcaccatgtacgtcttgagtatcagctccctatccgaagtgaaaatggtcca
cccgtggaggtcggcgtcaccatgtatgtcctcagcatcagctccgtgtccgaggtgttg
atggacttcacgttggatttttacttccgacaattctggacggatccacgactcgcgttc
aagcaaagaacgggcgtcgagacgctcagcgtcggttccgaattcatcaagaacatttgg
gtacccgacaccttctttgtcaacgagaagcagtcatactttcacattgctaccaccagc
aacgagttcattcgtattcaccattcgggaagcataacgcgtagcatacgcttaacgatt
acagcgtcgtgtcccatgaacttgcaatattttccgatggaccggcaattgtgccatatc
gagatcgagagctttggatacacaatgcgcgatattcggtacaaatggaacgccggccta
cagtcggtcggcatctcgaacgaagtggaactaccgcagtttcgcgtgctcggtcacagg
caacgacagacaaccatacacctatctacagtcggatacacgatgagggacatccggtac
aagtggaacgagggcccgaacagcgtcggagtcagcaacgaggtctccctgcctcagttc
aaggtcctcggtcatcgtcaacgtgccatggagattagtcttaccaccgggaattactcg
cggctggcctgcgagatccagttcgtacggtcgatgggctactacctgatccagatctac
ataccctcggggctgattgtcataatatcgtgggtgagcttttggctaaaccgaaacgcg
acccccgctcgggtggccctcggagtaaccactgtgctcactatgacgaccctaatgtcc
tcgacgaacgcggcgctaccaaagatctcctacgtcaagtccatcgacgtctatctgggc
acctgcttcgtcatggtctttgcctcgttgctcgaatatgccacggtgggatacatggcc
aagaggattcagatgcggaagaatcgctttcaaaagatagccgagagcatgaaggccgcg
agtgagaatccaggaccgccgcgcgtacccggcgatcatggcgatcacgcgcctaagcaa
acttggtcccatgttgtccaggaggtgcggttcaaggtgcacgacccaaaggcacacagc
aaaggtgggacacttgaaaacaccataaacggtcgcgccgatgaggaaacggcgggcgca
ccgcaacatattattcatcctggcaaggacatcaccaagctctacggtatgagtagacca
tgcattacgccgtcggacattgacaagtattcccgcatcgtattcccggtatgcttcgtc
tgcttcaatctgatgtactggatcatttatcttcacatcagcgacgtggttgcggacgat
ctcgtactgctcgaggaggccaagtaa
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