Polyergus mexicanus: 138943379
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Entry
138943379 CDS
T10742
Symbol
Spel1
Name
(RefSeq) DNA mismatch repair protein Msh2 isoform X1
KO
K08735
DNA mismatch repair protein MSH2
Organism
pmec Polyergus mexicanus
Pathway
pmec03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pmec00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
138943379 (Spel1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pmec03400
]
138943379 (Spel1)
DNA repair and recombination proteins [BR:
pmec03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
138943379 (Spel1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_IV
MutS_II
MutS_I
AAA_27
Motif
Other DBs
NCBI-GeneID:
138943379
NCBI-ProteinID:
XP_070170285
LinkDB
All DBs
Position
Unknown
AA seq
923 aa
AA seq
DB search
MAVQPNQQLSMDPPAQQSFVRFFKNLPEKLDTTIRFFNRSDYYTLHGTDALFAAQEVFKT
TSVCKMIGAEPHKTEGVILNKGHFETFVRDLLLVKQYRVEVYVNQGSSKNQNWVLEYKGS
PGNLSHFEDILFGNNDIAVGVSVIAVKLGTEGKSRVVGLSCVDVVSTLILVAEFQDNESF
SNLESLIVTLAPKECLLIQGEGSYEFQTLKQLIERNNTMVTLKKRNEFSSDSIIDDLNTL
IKFKKGQKQNAQSLPEVNLNLAMSATSALIKYLDLISDEGYMNQFSLKQVEQSRYIRLDS
AAIKALNIEPQIDRASNLHGNSAASVLTLLDKCRTAQGHRLIAQWVRQPLRDLSLIKERH
DIVELLVQNNELRSLLNDDYLKRIPDLQQLAKKLARKKSALQDCYKIYLCVSYLPKLLEQ
LSPEASVTALKTMIIDPLKELIDDMDKFQQLVEQTIDLDAAEKGDFMVNPGFADDFKELK
DAMDETEERIQRQLGKAADDLGMEAGKTLKLESNQQLGYYFRITLKEEKILRNNKRYTIL
DSNKTGVRFQNSKLSELNDDFIIARNKYLERQKDVITEIIGIAAGYSETMRTIGGVLACL
DVLTAFASAAVSANKVYVRPEMVPSEEGEMNLIQVRHPCLEMQQGVDYIANDINFKRNQY
HFCIITGPNMGGKSTYIRSVGVAALMAHIGSFVACDRATISLLDCILARIGADDSQLKGL
STFMMEMIETAAILKTATCNSLVIIDELGRGTSTYEGCGIAWSIAEHLARDIKSYCLFAT
HFHEITRLAEEVPTIQNHHVTALVEDNKLTLLYKVKPGICDQSFGLHVAKMANFPPDVIE
FAKRKQAELEDYQSVVFEGSNNPHKKRKVIQEAETLISQFLKKCKTLDLSLSDADIENEV
LLLKEEILSHKNPYIKALLDASS
NT seq
2772 nt
NT seq
+upstream
nt +downstream
nt
atggcagtacaacctaatcaacagttgagtatggaccctcccgcacaacagagctttgtt
agattttttaaaaatcttccagagaaacttgacacgacaatacgattcttcaataggtca
gactattatacattgcatggaactgatgctctctttgctgcacaagaagtatttaaaaca
acatctgtttgtaagatgattggagctgagccacataagacggaaggagtcattttgaat
aaaggtcactttgagacatttgtgcgtgatttgttgttagttaagcaatacagagttgaa
gtctatgtaaatcaaggttcgtctaaaaatcagaattgggtcttggaatataaaggttca
cccggtaatctatctcattttgaagatattctgtttggtaataacgacatagctgtaggt
gtatctgtaatagctgtgaaactaggtacggaaggaaaatctagggtcgttggactaagt
tgtgtggatgttgtttcgactttaatcttagtcgccgagtttcaagataatgagtcattt
tcgaatttagaatcactcattgtaactctggctccaaaagaatgcttactaattcaaggg
gaaggcagttatgagtttcaaactcttaaacaattaatagaaagaaacaatacaatggtc
actttaaaaaaaagaaatgaattttccagtgattcaatcatagatgacctaaatacatta
ataaaattcaagaaaggacagaagcagaatgcacaatcattgcccgaagttaatttaaat
ttagctatgtctgctacttctgctctcatcaaatatttagatttaatatcggacgaaggc
tatatgaatcagtttagtctaaagcaagtggagcaatcgcgatatataagattagattcc
gcggcaataaaggctcttaatatagaaccacagattgatagagcttctaacttgcacgga
aattctgccgccagcgtcttaactttattagacaaatgcaggaccgcacaagggcaccga
ctgattgcacaatgggttcgacagccccttagagacttgtctctaataaaggaacggcat
gacatcgttgaattattagtacaaaataacgaattaagatcccttcttaatgatgattat
ttaaaacgtataccagatttgcaacagctcgcaaaaaaattggctagaaaaaaatcagca
ttacaagattgttacaaaatctacttgtgtgtatcatatttgccaaaactattagaacaa
ctctcaccagaagcaagtgtgacagcactgaagacaatgataatagatccattaaaagaa
ttgatagatgatatggataaatttcaacagttagtggagcaaacaatcgatttagatgct
gctgaaaagggagattttatggttaatccaggatttgcggatgatttcaaagaattaaaa
gatgctatggatgaaacagaggaaagaatacaacgacaacttggtaaagcggcggatgat
cttggcatggaagcagggaaaacgttaaaattagaatctaatcaacaattgggctattat
tttcgtatcacgttaaaagaagagaaaatacttagaaataataagcgttatacaattttg
gattctaataaaactggtgtaagattccaaaacagtaaattgagcgaattaaacgacgat
tttataatcgccagaaataaatatctggagagacagaaagatgttattacagagattata
ggaatcgcagctggttatagcgaaacaatgcgtactattggtggtgtgctggcatgcctc
gacgttctcacagcgtttgcttccgcggcagtaagcgctaacaaagtgtacgtgcgtccc
gaaatggttccgagtgaagaaggcgaaatgaatctcattcaagtcagacatccatgtttg
gagatgcagcaaggagtagactatattgccaatgatattaattttaaacgaaatcagtac
catttttgcattattactggcccaaacatgggaggtaaaagtacttacattagatctgtc
ggtgtagctgctttaatggcacatattggtagttttgttgcttgtgatagagcgactata
tcgttattggattgtatattagctcgaataggagctgacgattctcaattgaaaggattg
tcgactttcatgatggaaatgatagaaactgctgctattttaaaaacagcaacatgtaat
tctcttgtaattattgatgagttgggtagagggacatccacttatgagggttgcggaata
gcatggtcaatagcagaacatttggcaagagatattaaatcgtattgtctgtttgctaca
cacttccatgagatcaccaggttagccgaagaagtacctactatacagaatcaccatgtt
actgctcttgtcgaagacaacaagttgacattactttataaagtaaaaccaggaatttgt
gaccaaagttttggtcttcatgtcgctaaaatggctaatttcccgccagacgtaatagag
tttgccaaaagaaagcaagctgagcttgaagattatcaaagtgtagtttttgaaggatcc
aataatcctcacaagaaacgaaaggtcattcaggaagctgaaacactcatttcgcaattt
ctcaaaaagtgtaaaactttagatctgtctttatctgatgctgatatagaaaatgaggta
ttattattgaaggaagaaatactgtctcataagaatccttacattaaagcgttactcgac
gcttcttcttaa
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