KEGG   Polyergus mexicanus: 138943388
Entry
138943388         CDS       T10742                                 
Symbol
Taf5
Name
(RefSeq) transcription initiation factor TFIID subunit 5 isoform X1
  KO
K03130  transcription initiation factor TFIID subunit 5
Organism
pmec  Polyergus mexicanus
Pathway
pmec03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:pmec00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    138943388 (Taf5)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:pmec03021]
    138943388 (Taf5)
   03036 Chromosome and associated proteins [BR:pmec03036]
    138943388 (Taf5)
Transcription machinery [BR:pmec03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIID
     138943388 (Taf5)
   Coactivators
    SAGA/TFTC/STAGA complex
     138943388 (Taf5)
Chromosome and associated proteins [BR:pmec03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    PCAF complex
     138943388 (Taf5)
    STAGA complex
     138943388 (Taf5)
    TFTC complex
     138943388 (Taf5)
    SAGA complex
     138943388 (Taf5)
    SLIK complex
     138943388 (Taf5)
SSDB
Motif
Pfam: Beta-prop_WDR5 Beta-prop_WDR3_1st WD40 Beta-prop_THOC3 WD40_Prp19 TFIID_NTD2 Beta-prop_EML_2 Beta-prop_WDR3_2nd WD40_WDHD1_1st WD40_CDC20-Fz Beta-prop_WDR36-Utp21_2nd WD40_Gbeta Beta-prop_CAF1B_HIR1 EIF3I WDR55 Beta-prop_TEP1_2nd WD40_MABP1-WDR62_2nd Beta-prop_WDR90_POC16_2nd WD40_MABP1-WDR62_1st Beta-prop_WDR36-Utp21_1st Beta-prop_EML Beta-prop_Aladin Beta-prop_IFT122_1st NBCH_WD40 Beta-prop_WDR75_1st Beta-prop_TEP1_C ANAPC4_WD40 Beta-prop_RIG_2nd Beta-prop_SCAP Beta-prop_WDR41 Beta-prop_IFT140_1st WDR90_beta-prop_4th WD40_RFWD3 Beta-prop_VPS8 Beta-prop_EIPR1 Beta-prop_DCAF4 Beta-prop_WDR19_1st Beta-prop_SPT8 Beta-prop_HPS5 Tricorn_2nd Beta-prop_Nup120_160 PEP5_VPS11_N Beta-prop_RIG_1st WDR54 Cytochrom_D1
Other DBs
NCBI-GeneID: 138943388
NCBI-ProteinID: XP_070170300
LinkDB
Position
Unknown
AA seq 659 aa
MDNDKSTMLAVLQLLKKYNLKGTEELFRKEANLTDISAEEAQQTDSEVTSVLSAYKSEGD
PAQYEKVYSELKKFVEGALDIYKHELGTILYPVLVHMYLELVYNNHSEEAKQLMEKFGGN
LEEYYQDDLKRLSNVTKREQMAGNELTDTFKSNQFIIRMSRDTLSILKRHLQEKKHSVLL
NIIQEHLYFDMYEGVARNKEQIDATSGAMVGEATRQDNKAKVYYGLLKEPDIQCVAPAEE
EEDDTGGGDGDKPKKKKAKKDPLFSKKTKSDPNAPPVGRMPLPNLKDADKLEKVKALREA
SKRVILGSDTLPSICFYTLLNTIHTVTAAEVAEDSSLLAIGFSDSGIKVWSLVPQKLRLM
KTGEQLSEVKQESEDVLVRMMDDRTSETTKNLYGHSGPIYSLSFSPDRNLLLSSSEDTTI
RLWSLHTWTCVVCYKGHLFPAWCVRFSPHGYYFASASNDKTARLWVTDSHQPLRIFAGHY
SDVDVIQFHPNSNYVATGSSDMTVRLWDCVTGSQVRLMTGHKGPIFSLAFSTEGRFLASA
GADHRVLVWDLAHGHLVAALSGHTNNIHCLSFSRDGNILVSGSLDYALKLWDFTKLAEEM
SLEDVNVSHNPDVKANAESYLLRTFATKNTSVLTIHFSRRNLLLGIATSRLSEMMYCDR
NT seq 1980 nt   +upstreamnt  +downstreamnt
atggataacgataaaagcactatgctagctgttctacagctcttgaagaaatacaattta
aaaggaaccgaagaattgtttagaaaagaagctaatctcacagatatctcagctgaagaa
gctcagcaaactgattccgaggtgacaagtgttctttctgcttacaagagcgagggagat
cctgcgcagtatgagaaagtatacagtgaattgaaaaaatttgtagaaggagctttggac
atttataagcacgaattagggaccatactatatccagttttagtacatatgtatctagaa
ttagtttacaataatcattctgaagaggcaaaacagctcatggaaaaatttggcggaaat
ttagaagaatattatcaagatgatttgaaaagattatccaatgtaacaaaacgagagcaa
atggcaggaaatgaattaactgatacttttaaatccaatcagtttataattagaatgtcg
agggatacgctttctatattaaaacgacatttgcaagaaaagaaacatagtgttttatta
aacattatacaggaacatctttactttgatatgtatgagggtgttgctcgcaataaagaa
cagatagatgcaacatctggagctatggtgggcgaagctactagacaagataacaaggcc
aaagtctattatggacttttaaaggaaccagatattcagtgtgtagcaccagctgaagaa
gaagaggacgatacaggtgggggagatggagataaaccaaaaaagaagaaagctaagaag
gatcctttgttttcaaaaaaaaccaaatcagatccaaatgcaccacctgttggcagaatg
ccattacctaatctgaaggatgcagataaacttgaaaaagttaaggcgttaagggaagca
tcaaaaagagttatcctaggatcagatacactaccatctatatgtttttatacattgctg
aacacgattcatactgtaacagcggcagaagtagcagaagactcaagtttattagctatc
ggattcagtgattctggtataaaagtttggagtttagttccacaaaaattgaggttgatg
aagactggtgaacaattatcagaagtcaagcaagaatcagaggatgtgctggttagaatg
atggatgatagaacatctgaaactacaaaaaatctttatggtcatagtggaccaatttat
agcctttcatttagtccagatagaaatcttttgctttcatcgtcagaagatactacaata
aggctatggtcactccatacatggacatgcgtcgtgtgttacaaaggtcacctatttccc
gcgtggtgcgtaagattctcaccgcacggttattactttgcaagtgcctcgaacgataaa
actgccagactatgggtaaccgattctcatcaaccattacgaatatttgctggccattac
tcagatgtcgatgtaattcagtttcatccaaattcaaattacgtcgcaactggttcgagc
gacatgactgtaagattatgggactgtgtgaccggcagtcaagttcgattaatgaccggg
cacaaagggcccattttttctctagctttttcaacagaaggacgatttttggcttcagcc
ggtgccgatcatcgtgtactcgtatgggatctagcgcacggtcatctcgttgcagccttg
tcgggacatacgaataatattcattgtctatcgtttagtcgagacggcaatattctcgtc
tcaggatccttagactatgcactgaaattatgggatttcacaaaattagcagaagagatg
agtctagaagatgtgaatgtttcacacaatccagatgtgaaagctaatgcagaatcctat
ttgttgcgtacttttgctacaaaaaatacatctgtcctgacaatacatttttcacgtaga
aatttactgctgggtatcgcaacatcgaggttgagcgaaatgatgtattgcgatcgataa

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