Polyergus mexicanus: 138943463
Help
Entry
138943463 CDS
T10742
Name
(RefSeq) uncharacterized protein
KO
K12875
apoptotic chromatin condensation inducer in the nucleus
Organism
pmec Polyergus mexicanus
Pathway
pmec03013
Nucleocytoplasmic transport
pmec03015
mRNA surveillance pathway
pmec03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pmec00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
138943463
09122 Translation
03013 Nucleocytoplasmic transport
138943463
03015 mRNA surveillance pathway
138943463
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pmec03019
]
138943463
03041 Spliceosome [BR:
pmec03041
]
138943463
Messenger RNA biogenesis [BR:
pmec03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
138943463
Spliceosome [BR:
pmec03041
]
Complex C
Other components
EJC/TREX
138943463
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GRASP55_65
RSB_motif
PDZ_6
PDZ_2
RRM_1
Motif
Other DBs
NCBI-GeneID:
138943463
NCBI-ProteinID:
XP_070170418
LinkDB
All DBs
Position
Unknown
AA seq
871 aa
AA seq
DB search
MGSSYSVEIPGGGTEGYHVLRVQEGSPGQQAGLEAFFDFIVAIGNTRLDQDNDTLKELLK
AGVNKELTITVYSSKTQSVRRTKIVPSMTWGGQGLLGVSIRFCSFEGANENVWHVLEVHP
SSPAELAGLQPFTDYIIGADSILHESEDLFTLIEAHESRPLKLYVYNTKDDSCREVTITP
NNTWGGEGSLGCGIGYGYLHRIPVRSVPEHKPANSYMNVKITTQTQSAMSTTSTTTVAEI
NPPQIINTLPGLSIPSNYTASLDNSEQTAKNLKNEQEVKSIENISGFNIQTQTASHLNFT
GAVSSYTPVSTVPHTFSNQPPVSFTPGTYQVTPSIPGMPTIPVLPTALPTSITNSYEAAV
ASSGSINVPRQQREQNFVQSASIFNIPELQREQNPVNNATVTTGFNVPQSHVVTTPISLP
GMPPITVSASLPQNTSLYPSVLQQQNQFSPGISTTTVAPTLTSSTSMQARHIYVSPKLPA
DTKPVIKHTDAAQQNRENGSEQEPKCVPRKRRWGTALSTDTAPSFSISTDSLKALVPGAK
PLSINEVRLSKDDDEDKDRHRSNDKRHNSSDSTNDNKIIDENLQKNGTAKKGNGKADNHI
AARRKISIVKEMPHVKSPSPPTSKPTNILLINNLVRPFTLNQIKELLSRTGTIVENGFWM
DRIKSKCIVEYTNEDQAFETRQALHGISWPMSNPKKLHVEYATKEDMEVARESSKEQPIA
RKAEPLSSDLWQQDWGRDEKINTTKVTVVREWDLGKEDGQQHIREKEREKKEHDKKRRAR
SRSPALDAHLSAPARKFKKKEDDPPPAKLLDDLFRKTKATPCIYWLPLTNEQIVVKEEMR
RQHMAEHARRLEEMRRADRNRDGRRRRSPRK
NT seq
2616 nt
NT seq
+upstream
nt +downstream
nt
atgggatcgtcttatagcgtagagataccaggaggcggtacagagggttatcatgtatta
agggttcaggaaggctctcctggacagcaagcaggacttgaagcattttttgattttatt
gtggctattggaaatactcgattagaccaagataatgataccttgaaggaacttttaaag
gctggtgtaaataaggaattaacaattacagtgtatagcagtaaaacacaatctgtaaga
cgaacaaaaattgtaccgagtatgacatggggtggacagggtttattaggcgttagtata
cgattttgttcgttcgaaggtgccaacgaaaatgtttggcatgtacttgaagtacatcct
tcatctccagcagagttggctggtttacaaccatttactgattatattattggcgcagac
tccattctccatgaaagtgaagacttattcactttaatagaggcacacgaatcacgacct
cttaaattatatgtatataatactaaggatgattcctgcagagaagtgactattacacct
aataatacctggggtggagagggaagcttaggatgtggaattggatatggttatctgcac
agaatacctgttagaagtgtgccagaacataaacctgctaattcatatatgaatgtcaaa
attactacacaaactcaatcagcaatgtcaacaactagtacaactactgtggcagaaatc
aatccaccacaaattatcaatacactacccggcttatccattccatcaaattacaccgct
tcattagataattctgaacaaactgcgaaaaatttgaaaaacgaacaagaagttaaatct
atcgaaaatatatctggctttaatatacaaacacagacagcaagtcatcttaattttact
ggtgctgttagtagctacacaccagtcagtacagttcctcatacgttttcgaatcaacct
cctgttagtttcacacctggcacttatcaagtaaccccaagcattcctggtatgccaacc
atcccggtattaccaacagcattacctacgagtatcaccaactcttatgaagcagcagta
gcatcatctggatcaatcaatgtcccaagacagcagagagaacagaattttgttcaaagt
gcgagcatatttaatattccagaactgcaaagagaacaaaatcctgtcaataatgctacc
gtgacaactggatttaatgtgcctcagtctcatgttgtaacgacacctatctcactgcca
ggaatgccacctatcacagttagcgcctctctcccacaaaacacttccctctatccatct
gttcttcaacaacaaaatcaattttcacctggtatcagcactaccactgttgctccaaca
ttaacatcgtcaacatccatgcaagcgcggcatatttatgtgtcaccgaagctgccggca
gacacgaagcctgtaattaaacacacggacgcagcacagcaaaatcgagaaaacggcagc
gaacaagaaccgaaatgtgtgccgaggaaacgtcgatggggaactgcgctttctacagat
actgcaccctcgttctctatctcgactgattcactcaaggcgttggtaccgggtgcaaaa
ccattatctatcaacgaagttcgtctctcgaaagatgacgacgaagacaaagatcgtcat
agaagtaacgataaacggcacaattccagtgacagtacaaatgataataaaataatagac
gaaaacttacagaagaatggcactgctaaaaagggcaatggaaaagcggataatcacatt
gcagcgaggcggaagatatcgatcgtgaaggaaatgccgcacgtgaaatcaccaagtccg
cctacgtctaaacctaccaacattctcctgatcaataatctagttcgcccttttacatta
aatcagatcaaggagcttctttcacgtaccggcaccatcgtggagaacggattctggatg
gatcggattaagtccaaatgcattgttgagtataccaacgaggatcaagcttttgaaacg
aggcaggcgcttcacggaatctcgtggcctatgtcgaatccgaagaagctccatgtggag
tatgctacgaaggaggacatggaagttgcacgggaatcatccaaggaacaaccaatcgct
cgcaaagccgaaccactctcgtccgatctatggcagcaagattggggtcgcgatgaaaaa
atcaacacaactaaggtgactgtagtgagagaatgggatttgggcaaagaggatggtcaa
cagcacatcagagagaaggaacgcgagaaaaaggagcacgacaagaagcgacgagcgagg
agtcggagtccagcattggacgcacatttatcggcaccggctcgtaaattcaagaagaag
gaggatgatccaccgccagccaagctcctagatgatctctttagaaagacgaaggcgaca
ccttgtatatattggctgccgcttacgaatgagcagatagttgtcaaggaagagatgcga
cggcaacatatggccgaacacgcgcgcagattagaagagatgagacgtgctgacagaaac
agggatggccggcgtcgacgtagtccaagaaaataa
DBGET
integrated database retrieval system