Polyergus mexicanus: 138943849
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Entry
138943849 CDS
T10742
Symbol
Skd
Name
(RefSeq) mediator of RNA polymerase II transcription subunit 13 isoform X1
KO
K15164
mediator of RNA polymerase II transcription subunit 13
Organism
pmec Polyergus mexicanus
Brite
KEGG Orthology (KO) [BR:
pmec00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pmec03021
]
138943849 (Skd)
Transcription machinery [BR:
pmec03021
]
Eukaryotic type
RNA polymerase II system
Mediator complex
CDK-module
138943849 (Skd)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Med13_C
MID_MedPIWI
Motif
Other DBs
NCBI-GeneID:
138943849
NCBI-ProteinID:
XP_070170886
LinkDB
All DBs
Position
Unknown
AA seq
2016 aa
AA seq
DB search
MTHPSHQTNGASLEDCHTNFFALTSLCGIKWRKLVWGEVAGGFGGTPLEDPVLSSFSRCL
AGDILCVWRRVAATSATAGPAAAANAASAPGAGIFDLGIAPSPAPPPLSLTAAKELWIFW
YGEEPDLSGLVSPELIACESEQGSWESGLSYECRSLLFKALHNLIERCLLSRDFVRLGKW
FVQPYNGYEKHRCSSSHLSFSFAFFVHGESTVCASVDVRQHPAVRHLTKTCLQRTQTSQS
GVKVILAPYGLAGTLTGQVSRMDSQLLEEWKHFYPISTSSNPETGLPPFVEVLVGGVRMR
YPSCYVLVTDMDDMSPETPLSPPSSPVACERPLLTQQELSAATELPERVWAECTLSSPVS
ASKTESSMESETWTFVEPTQKSSCSCSKYTTPGGWKSLASSQVQRERVDKGGRRVIPFHR
RSTTQWDACPSVPANAPRSVLSRTEAPSTPPGGPPSYSRGPPTGGDCLPVPSVGSPGSPA
PSPLLTPHSEPASVPPAEPTMPTLSPQPPPSHTNTAPPLTPSQGPKSISSACNNQVHSPS
VPGPILKRPVLASREYEGALLDDEQPLSWLYDYSLQEAWLNHPVKRFKATSTTGPPINRS
NILYPPMNSQTLQSQVPKLEIKQEPIVVAECIGRRTDPYEFDATGEENGTNVDGLRRQRD
DPSKPGSLFTSEGLQPSYKDLDQIFDNSDADTSSDETNLNQLQIQTPPGSNKSGGLHEET
RIDGTNKNNNRGVTVLRPEELSKMFPTPPSLEHNPVASPCQLSDPLIDQTELLMPTRPLR
HLPDIYPNMGSPQEEPIDDWSYVFKPAAICKMVGSSKYAPLTNLPSQSLPSITLPSHCVY
RPSWQCNPASTNQADKSLPPTRSGPVQQQQQQQQQQHQQQQQQQQQQQQQQQPCPSSPAP
PYRSATLPGRPPPPPYDQPSPATSTTSSYLNKNLNSIEADTPGPARAPESNSLIVNILLG
DTALNIFRDHNFDSCSLCVCNAGPKVVGNIKGADAGVYLSNSWAGSALFQDDDPIRCSCG
FSAVVNRRLAHRAGLFYEDEMEITGVAEDPAEKKKSSLAAAACPGAKATPDGLDIISPNV
LELLREQCLIVQSSASSLYRAARICATTKSYPTLTPTVNTLEFNDGNEVCVAALDQGKLD
GAHNERVVRVNGVHRWVFLRARGPQCSGDIVRMMRSLQPLLQDAVQKKCTTRMWEAPYTV
AGPLTWRQFHRLAGRGTDDRCEPQPIPALVVGYDRDWLSLSPYAICFWEKLSLEPFAGPR
DIAYVVVAPDSDCIVSRVKSFFRELSCTYEICRLGRHTPISKQLRDGILRVGKSTVQKLA
KQPIDEWFKFLGENQIGELLRLYAQVCNHRLAPYLTQVIQDRSLLDPGDSQSSNKQQQQS
TIPVSDTMPATPDVLTTKPESVEGENPRSETPSSTSTVTNQTAINTTGNTTPTSQTTSIN
TPITTTTGPDEEEIEPPAIVVYFVEPFSLGGTEDPDRRRLAILALLRAYSSAINSMPENM
RSNIHVQIISLESIMELGRARERRKIQDEMRALALNVFLQGRRLLNHNSTVKSLTGFGTA
AAADLFLKSKDERNKASYRLYAPAFVLAPLRAKSEAPESFGMARPEECAVLYLSYCLSED
QSWLLAAATDDRGEIFETATINIDIPNRKRRKRASARRIGLQKLMDFILSVMSQGVQPWR
LVVGRVGRIGHGELKGWSWLLSRKALLKASKHLKEICGQCSLLYPSAAPCVLSACLVSLE
PDSTLRLMADQFTPDERFSQASVNCQLSTPQDVTCTHILVFPTSATTQSSQTAFQEQHNV
PELGDDELFSALNDDMPEGMEGMGDFNDIFNVWPEPGAGGGQSPNGSPHRPEGSPHGGDG
GGSGLGNHDGPGSPFPCSNTPRIAIAEQTEEVGTLLQQPLALGYLVSTAPTGRMPPWFWA
ACPHLENVCPVFLKNALHLHSPAIQQNSDDLLQQQSAPTAHPLDSQYTTDVLRYVLEGYN
ALSWLALDANTKDRLSCLPVHVQALMHLYHATAALV
NT seq
6051 nt
NT seq
+upstream
nt +downstream
nt
atgacgcatccgtcgcatcaaaccaacggcgccagcctggaggactgccatacgaatttc
ttcgcactgacatccctctgcggtatcaaatggagaaagctcgtatggggcgaagtggca
ggtggattcggtggcactcctctcgaggatccggtgttgtcgagtttctcgcgatgttta
gctggtgacattctgtgcgtgtggcgacgagtggcagccacgtcggccactgccggcccg
gctgctgctgccaacgccgcttcggcgcccggggctggcatcttcgacctgggcatcgcg
ccctcgcccgcgcccccaccgctctccctcaccgccgccaaggagctctggatcttctgg
tacggcgaggaacccgatctctccggcctggtatcaccggagctcatcgcttgcgaaagt
gaacagggttcttgggaaagcggattgtcgtacgaatgccggtcacttcttttcaaggct
ctgcataacttgatcgaacggtgtttgctatcccgtgacttcgttcgtttaggaaagtgg
tttgtgcaaccttataatggctacgagaaacaccgttgcagcagcagccacctgtcgttc
tcatttgcattctttgtccacggagaaagtactgtgtgtgcaagtgtggacgttaggcag
catcctgcggtgcgacatcttacaaagacatgtctacaacgtacccaaacttctcaatcc
ggtgtcaaggtgatcctagccccttacggattggcgggcacattgacgggtcaagtgagc
cgtatggatagtcaacttctcgaagaatggaaacatttctatccgatcagtaccagcagt
aacccggagaccgggcttccgcccttcgtggaggttctcgtcggtggcgtgcgcatgcgt
tatccttcttgttacgtcctggttacggatatggatgatatgtcacccgaaacacctctc
tcaccaccgagtagtcccgtcgcttgcgaacgacccctcttaacgcaacaagaactgagc
gcagctaccgaattgccggaacgcgtgtgggcagaatgtactttgagttcgccagtgtcc
gcttccaaaacagaatcttccatggaatctgaaacctggacgtttgtggaaccgacgcaa
aaatcttcctgttcatgttcgaagtatacgacccccgggggttggaagagcctggcctcg
tctcaggttcagagggagagggtagataaaggtggacggagggtcataccgtttcaccga
cgctctaccactcagtgggacgcttgtccctctgtccctgctaatgcccccaggtcggta
ctaagtagaacggaagcacctagtacaccaccgggcggtcctccttcgtattcgcgtgga
ccaccaacaggaggagattgtctaccggtaccgtcagttggctcaccaggttctccggca
ccgtcacccctcctgactccgcactctgagccggcgtcagttccacccgcggaacccacg
atgccgactctcagtccgcaaccaccacccagtcacacaaacactgccccacctctgacc
ccatcgcaagggcccaagtccatttcttccgcgtgcaacaatcaggtgcacagtccatcg
gttcccgggccgatactgaaacgaccggtcttggcgtccagggaatatgaaggcgctctc
ttagatgacgagcaacccttgtcttggctgtacgattactcgcttcaggaggcatggctg
aatcatcccgtgaagcgtttcaaggccacgagcaccactggtcccccgatcaaccgcagc
aacattctatacccaccgatgaactctcaaacgctccaatctcaagtacctaagctggaa
attaaacaagaacctatcgtagttgctgaatgtattggtagaagaaccgatccatacgaa
tttgatgcgacgggtgaagaaaatggcacaaatgtcgatggtctcagacgacagagggat
gatccgtctaaaccaggatctctctttaccagcgagggtcttcagccatcctacaaagat
ttagatcaaatatttgacaattctgacgctgatacttccagtgacgaaacgaatttgaat
caactacaaatacaaacgccgcccggttcgaataaatccggtggattgcatgaggaaacg
agaatagatggtacgaacaagaataacaatcgaggagttacagttctacgaccagaggag
ctttccaagatgtttcctactccaccttctttagagcataatccggtcgcatcgccttgc
cagttgagcgatcccctcatagaccagactgaacttctaatgcccacgcgtccgctcaga
cacttacccgacatttatcctaacatgggctctccacaggaggagccgatcgatgattgg
tcatacgtgttcaaaccggcagctatctgcaaaatggtcggttcttccaagtacgcaccc
cttacgaatctgcctagccaatctctgccatccatcacactgccatcgcactgcgtgtac
agaccttcctggcagtgcaatcctgcttccactaatcaggcggacaaatctcttccacca
accagatccggacccgtacagcagcagcaacaacaacaacaacaacagcatcaacagcaa
cagcagcagcaacaacaacagcagcagcagcagcagccttgtccttcaagtccagcgcca
ccttaccgctcggccaccctgcctggtaggccgccgccgccgccgtacgaccaaccaagc
ccggctacctctactacttcctcgtatcttaacaaaaatctcaacagcatcgaggcagat
acaccgggacccgctcgtgcgcccgaatctaattctcttatagtgaatattctcttaggc
gacacggcactcaatatcttccgcgatcacaatttcgatagttgcagcctgtgcgtttgc
aatgctggacccaaggtagtgggcaatatcaaaggcgccgacgcgggtgtttatctcagc
aattcgtgggcgggctctgcacttttccaggacgatgatccgattagatgcagttgcggt
tttagcgccgtggtgaatcgccgtctcgcgcaccgggcaggcttgttctacgaggacgaa
atggagatcacaggtgtcgccgaagatccggcggagaaaaagaagagctcactcgccgca
gcggcgtgtcctggcgcgaaagcaactccggatggtctcgacataatatcgcccaatgtt
ctcgaattattacgcgagcaatgcctgattgttcaaagctcggccagcagtctgtatcga
gcggctaggatatgtgccaccacaaaaagctacccgacgcttacgccaactgtcaacacc
ctagaattcaatgatggtaacgaggtttgcgttgcggcgcttgatcagggcaaacttgat
ggcgcgcacaacgagagagtcgtgcgcgtaaacggtgtgcaccgatgggtgttcctcaga
gcgcgtggtccccaatgtagcggcgacattgtgcggatgatgaggtcgctacagccactg
ctccaggatgcggtacagaagaaatgtaccacccgtatgtgggaggcaccgtacaccgtt
gccggaccactcacgtggcggcagtttcatcgtttagccgggcgcggcaccgatgatcgc
tgcgagccgcaaccaatacccgctctagtcgttggatacgatcgcgattggctgtcattg
tcgccctacgcgatctgtttctgggaaaaactatcattggagccatttgccgggcccaga
gatatcgcctatgtagtcgttgcacccgatagcgattgtattgtcagtagagtcaagtcg
ttcttccgagaactgtcctgcacatatgagatttgccgattaggaaggcacacgccaatt
tcgaaacaactacgcgatggaatcctacgcgtcggcaaatcgactgtgcagaaactcgca
aagcaaccaatagatgagtggttcaagtttttgggagagaatcaaataggcgaattgttg
aggctgtatgctcaagtatgtaatcatcggttagccccatatctgacacaggttatacaa
gaccgtagtttgttagatcctggtgattcgcaatcgtccaacaaacagcaacagcaatct
actattcctgtttccgatactatgccagctacacccgatgtattaacgaccaaacccgag
tctgttgaaggagagaatccgcgaagtgaaactccttcctcaacgagcacagtgacaaat
caaaccgctattaatacaaccggtaatacaacaccgacttcacaaactacaagcatcaac
acgccgattactacaactacgggcccagacgaggaggaaatcgagcctccggctattgtt
gtctattttgtcgaaccattctctttaggcggcaccgaggatcccgatcgacgacgactc
gctattttagctttactcagagcttattcatccgcaatcaatagcatgcctgagaatatg
agatcaaatattcatgttcagataatatccttggaaagcataatggaattaggacgagct
cgagagaggcgaaagattcaagatgaaatgcgagccttggcattgaacgtcttcctgcaa
gggcgtcgattgttgaaccataattctacagtaaaaagtctcaccggtttcggtactgcc
gccgctgcagatctctttctcaagagtaaagacgaacggaacaaggcatcttaccggctc
tatgcaccggctttcgtgttggcaccgctgcgggcaaagagtgaagctcccgaatcattc
ggcatggcgaggcccgaggagtgcgcggtgctctatctcagttattgtttgagcgaggat
caatcttggctattggcagctgcgaccgacgacaggggtgaaattttcgagaccgctacc
ataaatattgacatacccaataggaagagaagaaagcgagcttcagctaggcgtatcggc
cttcaaaaactcatggactttatattaagcgtaatgtcccagggtgtacaaccatggaga
ttggtcgtaggtcgagtaggacgtattggacatggtgaactaaagggatggagttggtta
ctttctagaaaagcacttttgaaagcctcaaagcatttgaaagaaatatgtggacaatgt
agtctcttgtatccttcagcagcaccttgtgtgctcagcgcatgcttagtttcgctcgaa
ccggactccactctcagattaatggctgatcaattcactcccgatgagagattcagtcaa
gcctctgtaaactgccaattatccacaccacaggatgttacgtgtactcatatacttgtt
tttcctacatcagctaccacccagtcatcgcagacagcatttcaagagcaacataacgta
cccgaattaggagatgacgaattgttctccgctctaaatgatgatatgccagaaggtatg
gaagggatgggagattttaacgatatattcaatgtatggcctgaaccgggtgcaggcggt
ggacaaagcccgaacggaagtccgcatcgtcccgaaggatcaccgcacggaggggatggt
ggtggatcgggcttaggcaatcatgatggtcctggtagcccctttccgtgcagtaatacg
ccaagaatagcgatagctgaacaaacagaagaagttggcactctcttgcaacaacctctc
gctcttggctatctagtatcgactgcgccaacgggacgaatgccaccatggttctgggca
gcttgtcctcaccttgaaaatgtctgtccggtatttttgaaaaacgcgttacatctgcac
agtcccgcgatacaacaaaacagcgacgatttacttcagcaacaaagcgcacccactgct
catccgttggactcacaatacaccaccgacgtgcttaggtacgtgttggaaggatataac
gcactgtcgtggctcgcgttggatgcgaacaccaaggatcgattgtcctgcttaccagtg
cacgtgcaggcgctcatgcatctctatcatgcgacggcagctctcgtctga
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integrated database retrieval system
