Polyergus mexicanus: 138943983
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Entry
138943983 CDS
T10742
Symbol
Xpd
Name
(RefSeq) general transcription and DNA repair factor IIH helicase subunit XPD
KO
K10844
DNA excision repair protein ERCC-2 [EC:
5.6.2.3
]
Organism
pmec Polyergus mexicanus
Pathway
pmec03022
Basal transcription factors
pmec03420
Nucleotide excision repair
Brite
Enzymes [BR:
pmec01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
138943983 (Xpd)
Transcription machinery [BR:
pmec03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
138943983 (Xpd)
Chromosome and associated proteins [BR:
pmec03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
138943983 (Xpd)
DNA repair and recombination proteins [BR:
pmec03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
138943983 (Xpd)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Other DBs
NCBI-GeneID:
138943983
NCBI-ProteinID:
XP_070170956
LinkDB
All DBs
Position
Unknown
AA seq
759 aa
AA seq
DB search
MKISVEGLIVYFPYDYIYPEQYAYMLELKRGLDAKGHCLLEMPSGTGKTITLLSLIVAYM
LEHPLDVTKLIYCSRTVPEIEKVIEELKKLINYYEKETKSKPKIVGLVLSSRKNMCIHPE
VSREREGKIVDGRCHSLTASYVRERHNYDESTPICNFYEGFDMEGREQIIPPGIYSIDDL
KDYGKERNWCPYFLARFTILHAQIVVYSYHYLLDPKIAETVSKELSKSSVVIFDEAHNID
NVCIDSMSVKINKKLMEKSSTNIQLLEKTVAEMREDDVNKLKEEYNRLVEGLKDAQLQRE
TDIILANPILPDEILEEVVPGNIRNAEHFVSFLKRFVEYLKTRLRVQHVVQESSATFLRD
IQTKVAIERKPLRFCAQRLASLLRTMEITDLTDFSPIILVTHLATLVSTYTHGFTIIVEP
FDDKTPTVLNPVLHFSCLDSSIAVKPIFDRFQSVIITSGTLSPLDMYPKILNFHPVIMSS
FTMTLARPCLLPMIVGKGNDQVAISSKYETREDVAVIRNYGQLLVEFAATVPDGLVCFFT
SYLYMESVVAAWYDQGVVDQLQRHKLLFIETQDSAETSLALINYIKACENGRGAVLLSVA
RGKVSEGVDFDHHLGRAVLMFGIPYVYTQSRILKARLEYLRDQFQIRENDFLTFDAMRHA
AQCVGRAIRGKTDYGIMVFADKRFSRIDKRSKLPKWIQEHLNDSLCNLSTEEAIQISKKW
LRQMAQPFTRENQLGLSLLTREQLEKEEAAKIEQKAHQK
NT seq
2280 nt
NT seq
+upstream
nt +downstream
nt
atgaagataagtgttgagggattgattgtatattttccctatgattatatttatccggag
caatatgcatacatgcttgagctcaagcgtggcttggatgctaagggacactgtctattg
gagatgccttcaggcactggcaagacgataacattgttatctctcattgtagcatatatg
ttggagcatccattagatgttacaaaattgatttattgttctcgaacagtaccagagata
gagaaagttatagaggaattgaagaaacttataaactattatgaaaaagaaaccaaaagc
aagccaaaaattgttggtttagtacttagctctcgtaagaatatgtgtattcatcctgag
gttagtagagagcgagaaggtaaaattgtagatggtcgttgccattctcttactgcatca
tatgtacgagaaagacataattatgatgaatctacaccaatttgtaatttttatgaagga
tttgatatggaaggtagagagcaaattattcctcctggtatttattctattgatgatttg
aaagattatggaaaagaacgtaattggtgtccatatttccttgcaagatttacaatttta
catgcacaaattgtagtttacagttatcattatttattggatccaaagattgctgaaact
gtatccaaagaactcagcaagagttcggtagttatctttgatgaggctcataatattgat
aatgtttgcatcgattccatgagtgtgaaaataaataaaaaactaatggaaaaaagttcg
actaacatacaacttttagagaaaactgtagctgaaatgagagaagatgatgtaaataaa
ttgaaagaagaatacaatagactagtcgagggattgaaagatgctcaattacagagagaa
accgacatcattttagccaatcctattttacctgatgaaatactcgaagaagtcgttccg
ggtaacataagaaacgcagagcattttgtcagcttcctaaaacgattcgtcgagtacttg
aaaactcgcttacgtgtccaacacgtcgtgcaagagtcatccgcgacatttctgagggac
atccaaacgaaagttgctattgaacggaagccattgcgattttgtgcccaaagattagca
tctcttttacgcacaatggaaataacagatctaacagatttctctccgataatactggtg
acgcaccttgcgacattagtctctacatacacacacggtttcacgattatagtggaaccg
ttcgacgacaaaacaccgacggttctgaatccagttttacattttagctgtctagattct
tctatcgctgtcaagcctatatttgatagatttcaatctgtgataatcacttccggaaca
ctctctccattggatatgtatccaaaaatcttaaactttcatccagtcataatgtcgtcg
ttcacaatgacattggctagaccgtgccttttacctatgatcgtcggcaaaggtaatgat
caagtagcaatctcgtccaaatacgagacacgagaagatgtggctgttataagaaattat
ggccaattgttagtcgaatttgctgcaacagtacccgacggcttagtatgctttttcaca
tcgtatttatacatggaatctgtagtagctgcttggtatgatcaaggagttgtggatcaa
cttcagaggcataaattactttttatcgaaactcaagattcggcggagactagtttagct
ttgataaattacataaaggcttgcgaaaatggtagaggggccgttttactctctgtggct
cgcggaaaagtgtccgaaggcgtcgatttcgatcatcatttgggaagggctgtgctgatg
tttggtataccttacgtgtatacgcaatcgcgaatcttaaaggcacgtttagaatatctc
agggaccagtttcaaatacgagaaaacgatttcttaacttttgacgccatgagacacgct
gctcagtgcgtaggacgtgcgattagaggtaaaaccgattatggtataatggtgtttgca
gataagagattttcgaggatagataaacggagtaaattaccgaaatggatacaagaacat
ctaaatgacagtttatgcaatttatctactgaagaagccatacagatcagtaaaaaatgg
ttacgacaaatggcacagccatttacacgtgagaatcagcttggtttgtcattactgaca
agagaacaacttgagaaagaagaggctgccaaaattgaacaaaaagctcatcaaaaatga
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