Polyergus mexicanus: 138944804
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Entry
138944804 CDS
T10742
Symbol
Upf2
Name
(RefSeq) regulator of nonsense transcripts 2
KO
K14327
regulator of nonsense transcripts 2
Organism
pmec Polyergus mexicanus
Pathway
pmec03013
Nucleocytoplasmic transport
pmec03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pmec00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
138944804 (Upf2)
03015 mRNA surveillance pathway
138944804 (Upf2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pmec03019
]
138944804 (Upf2)
Messenger RNA biogenesis [BR:
pmec03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
138944804 (Upf2)
mRNA cycle factors
P-body specific factors
138944804 (Upf2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MIF4G
Upf2
Motif
Other DBs
NCBI-GeneID:
138944804
NCBI-ProteinID:
XP_070171916
LinkDB
All DBs
Position
Unknown
AA seq
1152 aa
AA seq
DB search
MSENTSEAATAEKEATGEEDAVSEADRQYLSEYVRETEQRLATKEEIRASNLNPTRPSDT
SFSKLDSSLKRNTTFVKKLKNFSMTQLDTVLKDMANLNLTKYVSEVATALVDAKLKMTDV
APAIRVCSFLHQTYVEFSTHFFENWQRILSLKINDKILNPSKLRVDLRFYAELVNAGIFT
HKQGLSLLGSVLTVLINMDKEEHNNASIILSFCRHCGEDYAGLVPKKVRELSEKLNVPIP
KSKLLSPDKQQNVKLLLRDYYNSLCKHLLKEHKELQAFEKQNRKILQTRGELSLERKEKL
EALQVSYERLLTSVQSFSDTLDEPMLELPVDNEMKTEAEETLKMINDGEDNTILEDMWGD
EETRRFYEVLPDLTVFLPGSYLKETPKEASKTDVSITEDALDEEIVFDELEEAEKIEEPP
EPEVEEPQVSNTSNKILLDAFLTHLPNCVNREMIDNAAVNFLMNLNTKHNKKKLVKALFG
VSRIRQDLLPFYSRLAAILHPVMPEIGNDLCQMLKQDFKYHVHKKDQINIESKIKVVRYI
GELVKFKLYSKIEALYCLKVLLHDFTHHHIEMVCNLLEICGRYLFCSPDSHQRTKVYLEQ
MMRKKAVTALDSRYVTIIENAYYFVNPPESTGGVAKKDRPPVHEFIRKLLYQDLSKTNTD
KVLKWMRKLDWEDENVSTYAVKCLTAAYNVKYPNIRCVGSLLAGLVAHYETIGPQVVDGV
LEDIRLCMEINLPKYNQRRIAMVKYLGELYNYRMVESGDIFRTLYLLITFGVSVDHSSPS
ILDPSDHLFRIRLVCTLLETCGQYFSGGSSKKKLDYFLVFFQNYFWFKYTDPIWTLENPF
PVGIDYMYRDTLTMLRPKMQLFQNYKEAQCAIEELRNSLYPSLGNPPVDDIPAEGENDMS
VIMEGDEEATATGNGSGDAKGMAELHFEESEDCSEAQSEEEWTADAERDDAMGTQENTQG
DRSQSLSAEGVIMDVTEELNAALPAGPRRVSCPEDDDFLSALDKMVSDNIQDRMRDSIKP
QQVDISVPLHVKSTKKTYEQLQERPTDNNTVDFVLMLRKGNKQQYKNLAVPVSSELAMNL
RNREQEQKEEKERVKRLTLNITERQEEEDYQETMNQSTRPVTVNLNRERRQKYNHPKGAP
DADLIFGPKKIR
NT seq
3459 nt
NT seq
+upstream
nt +downstream
nt
atgtccgaaaacacaagcgaagctgcaacagccgaaaaagaagctactggtgaagaagat
gctgtctcggaggcggatagacaatacttgtcagagtatgtgcgggaaacagaacaaaga
cttgcaacaaaggaagagattcgcgcatctaatctaaaccctacaagaccttcggataca
tcattcagtaaacttgactcgagtcttaaaagaaacaccacatttgtcaagaaattgaag
aactttagcatgactcaactcgatactgttttaaaagacatggcaaatttaaacttgacc
aaatatgtaagcgaagttgctaccgctttagtggatgccaaattaaagatgaccgacgtt
gcaccagccattagagtatgtagttttcttcatcaaacatatgttgagttttccactcat
tttttcgaaaactggcaaaggatattgtcattgaagattaatgataaaatcttgaatccc
agcaagttgagggtagatcttcgattctatgcagaactggtaaatgctgggatatttaca
cacaagcagggtttgtcattgctaggctcagtactgactgtgttgatcaatatggataag
gaggagcataataatgccagtataatattaagcttctgccgacactgtggcgaggattat
gctggtcttgtaccaaagaaggtacgagaattatccgagaaactaaatgttccgattcca
aagagcaaacttttgtcgccagacaagcaacagaacgttaaattgttactacgggactat
tacaactctttatgcaagcatttgttgaaggaacacaaggaattgcaggcgtttgaaaag
cagaatcgcaaaatattgcagactagaggtgaactaagtttagagagaaaggaaaaatta
gaggctctccaagtctcttatgaacgtttgctaaccagtgtacagagcttttctgatacg
ctggatgagccgatgctcgaacttccggtggacaatgagatgaagaccgaagcagaagaa
acgttaaagatgattaatgatggagaagataatactatcttggaagatatgtggggtgat
gaagaaacgagacgtttctatgaagtattaccagacttgacggtctttctgccaggttcg
tatttgaaggagacgccgaaagaagcatcaaagacagatgtatcgataacggaggatgct
cttgacgaagagatagtcttcgatgagttagaggaagccgagaaaatcgaggagccaccg
gaaccagaagtcgaggaaccgcaagtgtccaatacaagcaacaagatattattagacgct
ttcttgacgcatctgccgaactgcgtcaatcgggagatgatcgacaacgctgctgtgaac
tttttgatgaatcttaacacgaaacacaacaagaaaaaactagtgaaggcactttttggt
gtttctagaattcgccaagatctgctacccttctactctcgcttggcagccattctccat
ccggtaatgccagaaatcggcaacgatctgtgccaaatgctaaagcaagatttcaagtac
cacgtccataagaaggatcaaatcaacatcgagtcgaagatcaaggtggtccgctacatt
ggcgagctcgtcaaatttaagctctattcgaagatagaagcactctactgcttgaaggta
ttgttgcacgattttacgcatcatcacatcgagatggtttgcaatctgttggagatctgc
ggtcgatatctcttctgctcgccggactctcatcagagaaccaaagtctatctggaacaa
atgatgcgtaaaaaagcagttactgcacttgactcacgctatgtcacgattatcgaaaat
gcatattacttcgtgaatccacccgagtcgactggcggcgtcgcaaagaaagatagaccg
cctgtgcacgaattcatcagaaaattgctatatcaggatctatccaagacgaatacggat
aaggtgctcaaatggatgcgtaaacttgactgggaagatgagaacgtatcgacctatgcc
gtaaaatgtctgactgccgcttacaatgttaagtatcccaatattcgttgcgtgggcagt
ttgttggccggtttagtggcccattatgagaccatagggcctcaagtagtcgatggtgta
cttgaggatatacgactgtgcatggaaataaacttgcctaaatataaccaacgacgcatt
gctatggtcaaatatttgggcgaactgtacaattaccgaatggtagaaagtggcgacatt
ttccgcactttatatttactaatcacctttggcgtcagcgtagaccactcgtcaccgagc
atacttgatccatccgatcatctgtttcgcattcgtttggtatgtacgttattagagact
tgcggccaatatttcagcggtggctccagcaagaagaagcttgattattttctggtattt
ttccaaaattacttctggttcaagtatacagatcccatctggacgctcgaaaatccattc
cccgttgggatagactatatgtatcgcgatacattaacgatgctacggcccaaaatgcaa
ttgttccaaaattataaagaggcacaatgtgccatagaagaattgcgaaactctttatac
ccaagcttgggtaatcctcccgttgatgacatccctgcggaaggcgagaatgacatgagt
gttatcatggaaggtgatgaagaagcaacagcgaccggaaacggtagcggggatgcgaaa
ggtatggccgagctgcactttgaagagtccgaggattgttcagaggcgcagtcggaagag
gaatggacggccgacgcggagcgggatgatgctatgggcacccaagagaacactcagggt
gatcggtctcagagtctgtcggcggagggcgtaattatggacgtgacggaagaactaaat
gcagctttgccagctggaccgcgacgcgtgagttgtccggaggacgacgactttctatcc
gcgttggataaaatggtatcagataatatacaagatagaatgcgagattcaataaaaccg
cagcaggtcgatatctctgtgccgttgcatgtaaagagcacaaagaaaacatacgagcag
ctacaggaaagaccgactgacaacaacacagtggattttgtgctaatgttgagaaagggt
aataagcaacaatacaagaatctggcggttccagtatcatcagagttggccatgaatctt
aggaatcgcgaacaagaacagaaggaagagaaggaacgtgtgaaaagactgaccttaaac
attaccgagagacaagaagaggaagactatcaggagactatgaatcaaagcaccagaccg
gtcaccgtaaatctgaacagagaacgacgacaaaagtataatcatcctaaaggagccccg
gatgccgatttaattttcggaccaaagaaaattcgataa
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