KEGG   Polyergus mexicanus: 138944873
Entry
138944873         CDS       T10742                                 
Symbol
Smu1
Name
(RefSeq) WD40 repeat-containing protein SMU1
  KO
K13111  WD40 repeat-containing protein SMU1
Organism
pmec  Polyergus mexicanus
Brite
KEGG Orthology (KO) [BR:pmec00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:pmec03041]
    138944873 (Smu1)
Spliceosome [BR:pmec03041]
 Complex B
  Other components
   Complex B specific factors
    138944873 (Smu1)
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_WDHD1_1st Beta-prop_EML_2 WD40_CDC20-Fz Beta-prop_TEP1_2nd WDR55 WD40_MABP1-WDR62_2nd EIF3I ANAPC4_WD40 Beta-prop_CAF1B_HIR1 Beta-prop_EML Beta-prop_WDR75_1st Beta-prop_WDR90_POC16_2nd WDR90_beta-prop_4th Beta-prop_RIG_2nd LisH_TPL NBCH_WD40 Beta-prop_TEP1_C Beta-prop_Nup120_160 WD40_MABP1-WDR62_1st Ge1_WD40 Beta-prop_DCAF4 Beta-prop_Vps41 Beta-prop_IFT140_1st Beta-prop_NUP159_NUP214 Beta-prop_WDR35_TULP_N Beta-prop_NWD2_C Beta-prop_HPS5 Beta-prop_EIPR1 Beta-prop_SPT8 Beta-prop_IFT122_1st Beta-prop_WDR19_1st WD40_RFWD3 Beta-prop_SCAP Beta-prop_VPS8 Beta-prop_DCAF12 Beta-prop_IP5PC_F Beta-prop_WDR75_2nd PROPPIN WD_LRWD1 WD40_like KNTC1_N DUF7165 VPS8_N LisH_WDR26 zf_topless
Other DBs
NCBI-GeneID: 138944873
NCBI-ProteinID: XP_070172040
LinkDB
Position
Unknown
AA seq 510 aa
MSIEIESADVIRLIQQYLKEANLVKTLQTLQEETGVSLNTVDSVDGFVADINNGHWDTVL
KAIQSLKLPDKKLIDLYEQVVLELIELRELGAARSLLRQTDPMIMMKQQEPERYIHLENL
LARSYFDPREAYPDGSTKEKRRAYIATALAGEVSVVPSSRLLALLGQALKWQQHQGLLPP
GTTIDLFRGKAAVRDQEDEKYPTQLSKQIKFGQKSHVECARFSPDGQFLVTGSVDGFIEV
WNFTTGKIRKDLKYQAQDNFMMMEQAVLSMAFSRDSEMLAGGGQDGKIKVWKVQNGQCVR
RFEKAHSKGVTCLQFSRDNSQILSASFDTTVRIHGLKSGKTLKEFRGHTSFVNEVVFSPD
GHNIISASSDGTVKIWSLKTTECIGTYKSLGAADLTVNSIHPLPRNPEHFVVCNRSNTVV
IMNMQGQIVRSFSSGKREGGDFVCTVVSPRGEFIYCVGEDLVLYCFSTSSGKLERTLNIH
EKDVIGLAHHPHQNLLCSYSEDGLLKLWKP
NT seq 1533 nt   +upstreamnt  +downstreamnt
atgtcaatcgagattgaatctgccgatgtgatcagattgatacagcaatatcttaaggaa
gcaaatctcgtaaagacactgcaaactttacaggaggaaacaggtgtatcattgaatact
gttgacagtgtggatggattcgttgctgatataaataatggtcattgggacacagttttg
aaagctatacagtcattaaagttacctgataagaaacttatagatttatatgaacaggtt
gttctagaattaattgaattacgagaactaggtgcagcacgttccttattaagacagact
gatcctatgattatgatgaagcagcaagaacctgagagatacattcatttagaaaatcta
cttgcgcgttcgtattttgatccgcgcgaagcgtatcccgatggaagtacaaaggaaaag
cgaagagcatatatagccactgctctcgctggtgaagtatcagtagtaccctctagcaga
ttgctcgctttgttgggacaagcattgaagtggcaacaacatcagggtttgttacctcct
ggtactacgatagacttgtttcgcggaaaagcggcggtgcgcgatcaggaggacgaaaaa
tatccgacacagttatcaaagcaaatcaaatttggccagaagtcgcatgtggagtgcgcg
cgtttctcgcccgatggtcagttcttggtgaccggctcagtagacggttttatcgaggtg
tggaactttacaactggcaaaattaggaaggacttgaaatatcaagcgcaagacaatttt
atgatgatggagcaagcagtgctgtcaatggcgtttagtcgtgacagcgagatgctggcg
ggcggtggtcaggatggcaaaattaaggtctggaaagtgcaaaacggacagtgtgtgaga
agatttgaaaaggcgcattcaaagggtgtgacttgcttgcaattcagcagggataacagt
caaattttatcggcttcgtttgacactactgtaagaatacatggtcttaagtccggaaaa
actctaaaggagtttcgtggtcatacttcatttgttaatgaagttgttttttctccagat
ggtcataatataatcagtgcgtcatcagatggaactgtaaaaatttggagtctaaagact
accgaatgcataggaacttataaatcgttaggagctgctgatctcacagtcaacagcata
catcctcttcctcggaatccagagcactttgtcgtatgcaatcgttctaatacagtagta
attatgaatatgcaaggacaaatagtaagatcgttttcgagcggtaaacgagagggaggt
gactttgtatgtacagtagtgagtccgcgtggcgaatttatctattgtgttggtgaggat
ctcgtactgtactgtttttctacgtcatcaggaaaactcgaaagaactctcaatatacac
gaaaaggatgtgattggcctggcacatcatcctcatcaaaatctcttatgttcttatagc
gaggatggtctgttgaaattatggaaaccataa

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