Polyergus mexicanus: 138945056
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Entry
138945056 CDS
T10742
Name
(RefSeq) nuclear RNA export factor 1-like
KO
K14284
nuclear RNA export factor
Organism
pmec Polyergus mexicanus
Pathway
pmec03008
Ribosome biogenesis in eukaryotes
pmec03013
Nucleocytoplasmic transport
pmec03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pmec00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
138945056
03015 mRNA surveillance pathway
138945056
03008 Ribosome biogenesis in eukaryotes
138945056
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pmec03019
]
138945056
03009 Ribosome biogenesis [BR:
pmec03009
]
138945056
Messenger RNA biogenesis [BR:
pmec03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
138945056
mRNA cycle factors
Stress granule specific factors
138945056
Ribosome biogenesis [BR:
pmec03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
138945056
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NXF_NTF2
LRR_NXF1-5
Tap-RNA_bind
TAP_C
NTF2
LRR_8
LRR_4
Motif
Other DBs
NCBI-GeneID:
138945056
NCBI-ProteinID:
XP_070172341
LinkDB
All DBs
Position
Unknown
AA seq
597 aa
AA seq
DB search
MSRKLNKFWTDHNSLASFENRRYIISHDDHMGRNNKGFNLGEPRPCIQPSFKIRFNRFLD
KTFSRERNNPPYRNRNLKEIQFGPRLQFIVNKCSWYRISIPFGHKYKRDYVLNSLLSYMA
PEVFVPIMYKTTPYEANFYVDDYKTANALLNCDHKITMVDGFRLQVRVKPGFPQYEINDK
YKERLKQVISKRYVQETNALDLSKFHQDPSLVDDYCCALFRPSILMAVLDIVGEHIPTLE
VLNLESNKLLNIDKLSELNKKFLKLKILHIGDNKIKDIYQIDAIKDLKLEELKLTGNPVC
NKYTCQQNKYICDIRKRFPKLLRLDDTDLPQPIVFDVIDPAKIPKSQKIFFTDTNAQQIA
YRFLQQYFTILDSENRQFLLDAYDEQAYFSMTITASYANKLNRYLINSRNLFRICDTVKR
QKSLKYGRLPVVSFISEMPRTRHLLDTFTMDITLATQTMMFITTTGYFQELDNKEQTIRY
FNRTFIIVPEGDGYCIRNEQLHISQPSDAQLKQLNQQIQPNTPELLPAEAAKSTDSELSK
VVRQQMIMVLSQQTNMNFEWSLKCLEEMQWNYDNAFSAFQEFFKRGQIPSEAFTKCT
NT seq
1794 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaggaaattgaataaattttggactgatcacaacagtcttgcttctttcgagaat
aggcgttatatcatcagtcatgatgatcatatgggaagaaataataaaggatttaatttg
ggagaacccagaccttgcatccagccatcatttaagatcagatttaacagatttttggac
aaaacattttctcgagaaagaaacaatcctccatatagaaacaggaacttgaaagaaatc
caatttggacctagattacagtttatagttaacaaatgcagttggtatagaatcagtata
ccatttggccacaaatataaaagagattatgttttaaattctctattaagctacatggca
cctgaagtatttgttccaataatgtataaaacaacgccatacgaagccaatttctatgtc
gacgattataagacagcaaatgcattgttaaattgtgatcacaagatcacaatggtagat
ggcttcagactgcaagtgagagttaaaccaggatttccacaatacgagattaatgacaaa
tataaggaacgactaaaacaagttatatccaagagatacgtgcaagaaacaaatgctttg
gatttgtcaaaatttcatcaagatcctagtcttgttgatgattattgttgtgcattattc
cgtccttcaatattgatggctgtgctagatatcgtaggcgaacatataccaacgttagaa
gtcttgaacttagaaagcaataagctgcttaatattgataaacttagcgaattaaataaa
aaattcttgaagttgaaaattcttcacattggtgataacaaaataaaagacatctatcag
atagacgctattaaagatctaaaactggaagaactcaaactgactggaaaccctgtctgt
aacaagtatacatgtcaacaaaataaatacatttgcgacatccggaaacggtttccaaag
ctgttgcgtctggatgacacggatttaccacaaccaattgtatttgatgtgattgaccct
gcaaaaataccaaaatcacaaaagatattttttactgatacaaacgcgcagcaaatcgcg
tatcggtttttacaacagtattttacgatattggatagcgagaaccgtcaattcttactt
gatgcatatgacgaacaggcatactttagtatgacaataactgcttcctatgctaacaaa
ttaaatcgatatcttataaatagccggaatttgtttagaatatgtgacacagtcaaaaga
cagaaatcattgaagtatggtagattaccagtagtttctttcatatcagagatgccacga
acaaggcatctcctagatacttttactatggatattacacttgctacacaaacaatgatg
tttatcacaacaacaggctatttccaagagcttgataacaaggaacaaaccattcgctat
ttcaatcgaacattcataattgttccagaaggtgatggatactgtattcgcaatgaacaa
ttgcatattagtcagccttctgatgcacaactgaagcaactgaaccaacagatccagcca
aatacaccggagctattgcctgctgaggcagcgaagtctacagattcggaattaagcaaa
gttgtaagacagcaaatgataatggtattgagtcagcaaacaaacatgaatttcgaatgg
agtttaaaatgcttagaagagatgcagtggaattatgataacgcattctctgcgtttcaa
gagttcttcaaacgcggtcaaataccatcagaagcgtttacgaaatgtacataa
DBGET
integrated database retrieval system
