Polyergus mexicanus: 138945166
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Entry
138945166 CDS
T10742
Symbol
Vps13
Name
(RefSeq) intermembrane lipid transfer protein Vps13 isoform X1
KO
K19525
vacuolar protein sorting-associated protein 13A/C
Organism
pmec Polyergus mexicanus
Brite
Membrane trafficking [BR:
pmec04131
]
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab associated proteins
138945166 (Vps13)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Other DBs
NCBI-GeneID:
138945166
NCBI-ProteinID:
XP_070172563
LinkDB
All DBs
Position
Unknown
AA seq
3286 aa
AA seq
DB search
MVFESIIAELLNKVIGEYIENLDYTQLKVSLWGGDLVLNDLLIKESALDVLDLPVRLEYG
RLGKLILKIPFKDMWNGQIDAIVEELFILVVPTSQIRYNEEKETKAQLEAKRAELERVEK
RKQLADIKSQEKLDDSMVEKLVARMIKNIHVEIKRIHVRYEDHVTFKEHPFSVGFTLNTF
VLESCTDLWETTGNLKDMYAIPQIFKLCSLDGLAVYLNTSVEQYSKSPQSSYSNLFCQGI
ATMDYIPTGYQYLLGPINVKSKLRLNPKPESDDSNYTIPKVWLDLEMQKLRIGLTKRQYQ
TLVRLGEGLDQARQAAPYRKYRPNLTSYRGHYKEWWHFAYTCVLEETVRRCRRNWNWTHM
KGHRDTCRDYAQAYQTKLTTKKPAKEIAERLTHGEMKLDIFNLVIIRQQIEMEVERLAER
EKSLKAKRGWFGFLWNSSQAEETKDLNSAAAIMRRFEEAMTPQEKEKLYRAIDYQENSAP
AHYPETYEMIDTRFFLHGLQISLLDTDKEHSCILDLQLHGVRAGFKSRPSANAILVTASI
NDMKLLGVTQDGQVPSLFNSEHGSSDSDLLSVSYEKNPIDKLCGDRVVVKSRSVDIIYDA
QTIIELVNLFKVQDSSTLNQLQTAAAEQLEGLKEMSALGLEHAIQKHSILDIQVDMQASQ
LIIPHGGLYEDSKALIVVNLGSLKMHSLEKGKSDMAGASVKQLVSMGKSEEEVLLYLREH
SYDKFVLEIVNFQVLVSLPNEEWRSALASPKSSLTLLHPTTLEIQFHKGLVTDDPLLPKL
RLLGRLPSVTVNITDVRLLQALSIAQSIPLPEEERTAELHQTSLSKSISQLSLKELGTTI
SSIADKRKQQQEATSTPMKQTTDLEMRFEMKEFTLLVSRQRDDSAESSEFVRFQVLQLEA
EMLQRTYDQEVQLRLGGVQMRQLHEDQEIYIVNTPMSAGRDEYLIVVRYINVNKRSPEFT
TRHGSVVKLLLLEFTSLDTLLHQEALIELLQFSTYIQDRMSSLEGVQKKEVEHLRPTHLA
SIQEETSGFLREQLQRQKLRSTGRRRRQTVECIDLKISAKIGSINLKISSAVRDISALYI
EGGSASFLSKSSYSQVNADLASISIKDLNPVSVYKDIVAVEGTESLQIQAVMYNIEPWEV
NKNNMSVKVTMGCHRIVFLNAFVTSVMNFLNNFQTAQKAIKDASAAAAEAARTNIKDVQE
SASRIELCVKIKAPVVYVPMNSKSEHSLMLDMGNLMVCNVFKKLEATNEETGECPIVDEM
KIELQNLKLSRIRLNKEKFISENEVLLLEPVTFTLLMKRNLSTAWFTAIPDIDMSGRLNK
INLLLSKEDYTTILKVLEQNLGETFEDPKSVQVAPSAVKSECNGELQIQPAYKYEVDTSQ
EPPSADTQERHAHTFVKFEFIMDSLVINLFTGGSKLLQSQTSPLHLPENGLARFSLTHFA
VKGRVFADGLLATSILLMNCTLDDTRRRREGSLTRIMERTSSVPSGEDHLDKDAKYNARS
MLDVTVRQSPNDTFADVRVFSFSIIVSLDYLMKIKDFFDVDTAGKTAATSLQSSSRGESV
IPPKKKHPMQQQPVASTSKMLTVNLHVEKPDIILLEDMDDINSNCIILNTELLLKIRIMG
EHQVITGSIKDFSLLTGIYNPTKRADWIYQVLRPCSISVAGSTPEGKGLHLEICCTDIHM
SVSPGVIEILNKVVHTVTKKEEENKEVVKPEPNYEGLWIVTPFEENDYWFLKTEVAMEAF
EEFAYSDDEVATVYKSELAIISAPTILFTLEAGVGNKTLPMLLLHVGFQSNVNDWSTKTM
GIDCTMSVIMAYYNSRLALWEPLIEPIEDSKNGKRVSTPWELKTKIQFNDILLDSRGASA
VSPTSDSELEELPNQSTKMSIDITSADNLEITVTKTCLDVLKQLGQSFSSAMDANRKEST
RKVAPYVLKNETGLAMILDLEHSLFKIFDDGSRIRNDSDSYMEVILETGASIELAPKTSK
LDARLLEQLKAETVKDRDDSKFAVSFKGIQGKLAIPVLKADKRFFSLKYRKEGSEEWGIV
SDVVVEEGSTIVTLRSILQVHNHFAQPIAVYYMTKRGNEVECVGTVAPDEKLNLPLDTVY
TATNIYWLFFSVQGYMVSVEPFIWKDLQKTVSMTRLLKCESRSKQDITEPFYLQAMGEIE
QVYFENTTRHTMASTIYNVHLYPSVYLKNFLPIDIIISLPGTTQESLLEASASLQLPTID
PVKSSMIIKLPNYLEKDWSCRGEIVANPPEFAVWSFESFDSAQKVILDLGMHTAYKHSSI
VMALYCPFWMLNKTGLMLSYRKSSKGGKEHSSPIKKFVSTMKPHQQRYRRRKTRATTDDY
LNVLYHPEHFKGPILFSFRSKAFFGKKKAMIRVEDGEWSDKFSIDVAGSEGVVACKYNGM
TYQIGVHNQLTYNSLTKQITFTPYYILINNADFLIECQEGDRPADPIIKVAAGECAALWP
RIEHENKTLRAKVAGQPEKTAAFIYTDSHTTLLKLDNKYGGINVDVQISEGGVYISLSAY
SSGNAPALIINHTPHTINFWEKGSINVRSVQSYNRMFYTWENPAGPRKLVWEDNNGKEFE
DNLRKDNLGAFQLPDINEELFHVSFLDGIQRVLLFTTNLKIAEDCQLAGDLEVIDQEIML
NIHGIGFSLVNNITKSELLYMCIASSGIIWETRKSPGGRWRALNAKEVNAIEEGYQRYMK
ELQIGKDADYRLMLEPKLMVDYLNMEMLKPHRRYMRRTFQTGLWLQYRTSAHQVQLHAKI
NRLQIDNQLSECVFPVILAPVPLPKSVTQSTVVKPFAELSMVKRLLEHSTVQQFRYFKVL
VQEFHIKVDIVFLNAIIGLFEADEVNDAEESALFRIDMKLVNEPLMYHVNLITTAEQKNF
FDLLHFSPLKIHISFSMTGSGGGPSAIPQVLNVLLQGIGVTLTDINDIVFKLAYFERNYV
FMTNKQLISEATTHYAGQAIKQAYVLVLGLDVIGNPYGLVVGTMKGIEDLFYEPFQGAIQ
GPGEFAEGLFLGVRSMLGHTVGGMAGAVSKITGAMGKGIAALTFDKDYQRKRQEQLNKQP
ANLQEGLARSGKGLVMGVVDGVTGVVMKPISGAKEEGVEGFFKGFGKGVVGLVTRPTAGV
IDFASGSFGAVRRATELNEEARRVRSPRFLQPDSLVRPYIKDEAEGNKILMELEKGKYAH
TDVYIYHIFINKDVLLLTDKRLSYLEHSDLFGGWRVDWTHTWNEFGESPKIVERGVQIFL
KDISKKKRLGGFFGSVDQSKILLITDHNIKQLLYNKIQEQINQYRV
NT seq
9861 nt
NT seq
+upstream
nt +downstream
nt
atggtctttgaatcaatcattgcggagctcctcaacaaggtgatcggcgagtacattgag
aacttggactatacgcagcttaaagtcagtctctggggaggagatcttgtattaaatgat
ttgttgataaaagaatctgcgttagatgtgctggatcttccagtaagattggaatatggc
cgtttaggaaaattgatactaaagattccgtttaaagatatgtggaatggtcagattgac
gctatagtcgaggagttgttcatactggtggtgcctacgagtcagattagatacaatgaa
gagaaagaaaccaaagctcaattggaagccaaacgggcggaactcgagagagtggagaag
agaaagcagttagcagacataaaatcacaagagaaactagacgattcgatggtcgaaaag
ctagtcgcgcgtatgataaaaaatattcatgtagaaatcaaaaggatccacgtgcggtac
gaagatcacgttacctttaaggagcacccgttttccgtcggtttcaccttgaataccttt
gtcctggagagttgtacagacttgtgggagacgacaggcaatctgaaggacatgtatgcc
ataccgcagatctttaagctgtgcagcctggacgggctggcagtctatctcaatacgagt
gtggagcagtatagcaagagcccacaatcctcgtattccaatctcttctgtcaaggtatc
gcgaccatggactatatcccgacgggttaccaatatctgctagggccgatcaacgtcaag
tccaagctcagacttaatcccaagcccgagtccgacgatagcaattatactattcctaag
gtatggctagatttggaaatgcaaaaattgcgaattggcttgacgaagcggcaatatcag
actttggtacgactgggcgaaggcctggatcaagcgcgacaagctgcgccataccggaag
tatcggccgaatctgacgtcgtatcgcggtcattacaaggagtggtggcatttcgcgtac
acttgcgttctcgaggaaaccgtgcgacgctgtcgtcgcaactggaactggactcacatg
aaaggacatcgcgatacttgtcgtgattatgcccaagcttatcagacaaagctgacgacg
aagaagccggcgaaggagatcgcagaaaggttaacgcatggtgagatgaaattggacatc
tttaatctggtaatcatccggcaacagatcgagatggaggtagaaagactggcggaacgg
gagaagagtctaaaggcaaagcgaggctggttcggttttctgtggaacagttcacaagcc
gaggaaacgaaagacctcaactcagccgcagccattatgcgcagatttgaggaggcaatg
actccgcaagagaaggagaagctttaccgggcgatcgactatcaggagaacagcgcgccc
gcacactatccggaaacatacgaaatgatcgatacacgtttctttctacatggtctacag
atctctctgctggacacagacaaggagcattcgtgcatcttggatctacagctgcacggc
gtgcgagcgggtttcaagtcgcgaccgtccgcgaacgcgatcctcgtcaccgcttccatc
aacgacatgaagctgctgggcgtgacgcaagacggccaggtgccctcgcttttcaactcg
gaacatggcagctccgacagcgacttactgtcggtttcttacgagaaaaatccaatcgac
aagctgtgtggcgatcgcgtcgtcgtcaagtcccgatccgtggacatcatctatgatgcc
caaaccatcatagaactggtcaacctgtttaaggtacaagattcttcgacgttaaaccag
cttcagacagcagcagcggagcagttggagggcttgaaggaaatgtcggcgcttgggcta
gagcatgccatacagaaacactcgatcttggatatacaagtggacatgcaggcctcgcaa
cttatcataccacacggtggcctctacgaagattcgaaagcgctgatcgtcgtaaatctg
ggtagtctaaagatgcattctttggagaagggcaaaagcgacatggctggcgccagcgtt
aaacagctggttagcatgggcaagagcgaggaagaagtgctgctatacttgagggagcat
agttatgacaaattcgttttggagatagttaactttcaggtgctagtctcattaccaaac
gaagaatggcgatcagctcttgcaagccccaaaagttctttgacgttgcttcatccaacc
acattagaaattcagtttcataaaggcttggtgacggacgatcctctattaccgaaactc
cggcttctcggtcgcctaccgtcagttaccgtgaacataacagatgttcggttgctgcag
gcactttccatcgcgcagagcattccgctgcccgaagaggaaagaaccgcggagttgcat
caaacgtctctctccaaatccatctcacaactgtcgctaaaggagctcggaaccacgata
tccagtatcgccgataagaggaagcagcagcaagaagctacgtccacgccaatgaagcag
accaccgatctggagatgagattcgagatgaaggaatttacgctgttagtgtctagacaa
cgagatgacagcgcggagtcgtcggaatttgtcagattccaggtgctgcagttggaggcg
gaaatgctgcagcgcacatatgatcaggaagtgcagctgcgactgggtggcgtgcagatg
cgacagctgcacgaggatcaggaaatttacattgtcaacactccgatgtcggccggcaga
gacgagtatctgattgtcgtacggtacataaatgtgaataaacgttcgccggaattcacc
acgcgacacggttctgtcgtgaagctactgttactggaattcacctcgctggacacgctg
ttgcatcaggaggcgctcattgagctgctacaatttagcacatacatacaagaccgaatg
agctcgctcgaaggtgttcaaaagaaagaagtagaacatcttcgaccaactcacttggct
tccatccaggaagagacctcgggtttcctcagggaacaactgcagaggcaaaaattgaga
tctactggacgacgtagaagacagacggtcgagtgcatcgatttaaagataagcgccaaa
attggatcgatcaatctaaaaatctccagcgctgtccgggatattagcgcgctctacatc
gagggtggcagcgccagttttctcagcaagtcttcgtactcgcaagtgaacgctgatctg
gcttccatcagcattaaagaccttaatcctgtttcagtatacaaggacattgtggctgtg
gagggtaccgaatctttgcagattcaagcggtgatgtataatattgaaccgtgggaggta
aacaagaacaacatgtccgtcaaggtgacgatgggttgccatcgtatcgtcttcctgaat
gcatttgtcaccagcgtgatgaattttttgaacaactttcaaacagcgcagaaagctatc
aaagacgcgtcggctgcagcggcggaagctgcgaggacgaacatcaaggatgttcaagaa
agtgcctctcgcatcgagctgtgtgtcaagatcaaggctcccgtcgtatatgtaccgatg
aactccaagagcgagcacagtttaatgctggatatgggcaaccttatggtgtgcaacgtc
ttcaagaaattggaggcgacaaatgaggagaccggcgaatgccccatagtggacgagatg
aagatcgaactgcagaatttgaagctgtcacgaatccgactaaataaggagaaatttatc
agtgagaacgaagtacttttgttagagccggtaacgtttacgctgctaatgaagcgcaat
ctgtcaaccgcctggttcaccgctattccggacattgatatgtccggcagattgaacaaa
atcaatttactgttaagcaaagaggattatactactattctgaaggtactagagcagaat
ctgggcgagaccttcgaagatccgaaatctgtgcaagttgcaccatctgctgtgaaatct
gaatgcaatggagagctgcagattcagccggcgtacaaatacgaagtcgacacgtcgcaa
gaaccgccgtcggcggatacacaggagcggcatgcccacacgttcgtaaaattcgagttt
atcatggatagcctggtaatcaatttgtttaccggtggctccaaattactgcagtcgcag
acgtcgccgctgcacctgcctgagaacggactagcgcgctttagtctcacgcactttgcc
gtgaaaggtcgcgtgttcgcggatggactgctagccacgtcaatcttgctgatgaactgt
acactggacgacacgcggcggagacgggaaggctctctgacgcggatcatggagaggacc
agcagtgtgcccagtggcgaggatcatctcgacaaggatgccaagtacaatgccaggagc
atgttggatgtaacggtgcgccaaagtccgaacgatacgtttgccgacgtgcgggtgttc
tccttcagcataattgtgtccctcgactatctcatgaagatcaaggactttttcgacgtg
gataccgcgggcaagaccgccgccacttctctgcagtcttcgtcgagaggcgaatcggtg
ataccgccaaagaaaaaacatccgatgcaacagcagccggtcgcttcgacgtccaaaatg
ttaaccgtgaatctgcatgtggaaaaaccggacattatcctactcgaggacatggacgat
atcaactcgaattgcataatattaaacacggagctgttgttaaaaatacgcattatggga
gaacatcaggtgatcacgggatccattaaggatttttctcttctcacggggatatacaat
cctacgaaaagagccgattggatctatcaggttctgagaccatgcagcattagcgttgcc
ggttccacgccggagggcaaagggcttcatttggagatctgttgtacagacatacacatg
tctgtttcgccaggtgtgatcgaaatattgaataaagttgttcacacggtgacaaaaaag
gaagaggaaaacaaggaagtcgttaaacccgagcctaattacgaaggattgtggatcgtc
acgccctttgaggaaaatgattattggttcctaaagacagaagttgcaatggaagctttt
gaagagtttgcatattcagatgacgaggttgcgactgtttataaatccgaattagcaatc
atctcggctccgacaatcttgtttactctggaggcaggtgtcgggaacaaaactttgccc
atgttgttgcttcacgtgggtttccaaagcaacgttaacgattggagtacgaaaacgatg
ggcatcgattgtacgatgtctgtaatcatggcatattataacagtcgcttagcactgtgg
gaaccgttaattgagccgatagaagactccaaaaatggtaaacgcgtctccacaccgtgg
gagctaaagacgaagattcaatttaacgatatactactggactcgagaggcgccagcgcg
gttagtcccacttcggacagtgagctcgaggagctaccaaatcagtccaccaagatgtcc
attgacattacatctgctgataatctggagataactgtaacgaagacgtgtctggatgta
ctgaagcaacttggtcaatcgttttcctcggctatggatgccaatagaaaagaatctacc
aggaaggtggcgccgtacgtgctgaagaacgagactggtttggcaatgatacttgatctg
gagcatagtcttttcaagatatttgacgatggttcaagaatacggaatgacagcgattcg
tacatggaggtgattcttgagaccggcgcgtcaatcgagttggcgccgaaaacatccaag
ctggacgcgcgtcttctcgagcaattgaaagcggaaaccgtgaaggacagagacgacagt
aaatttgctgtttcttttaaaggtatccaaggcaaattggcgatacctgttctgaaagcg
gacaagagattcttctctttgaagtatcgcaaagagggctccgaggaatggggcatcgta
tcggatgtcgttgtggaagaaggtagcacgatcgtcactcttagaagtatacttcaggtc
cacaatcacttcgcgcaaccgatagcagtttattatatgacgaagcgcggaaatgaggtc
gaatgcgtgggtacggtggcaccggatgagaagctcaacttacccctcgataccgtgtac
accgcgactaacatctattggctcttcttcagtgttcaaggatatatggtgtcggtcgag
ccattcatctggaaggacttgcagaaaacggtttccatgacaaggctactgaaatgcgaa
tctcgatctaaacaggacattacagaaccattttatcttcaggccatgggagagatcgag
caggtatatttcgagaatactactcgtcataccatggctagtaccatctacaacgtacat
ctatatccgtctgtgtatctgaaaaactttttgccaatcgacattatcatctccttgcca
ggcaccactcaggagagtttactcgaggccagcgcttccttgcagctgcccacaatcgat
ccagtcaaatcgagtatgattatcaagctaccgaattacctggaaaaagactggtcatgc
agaggcgagatcgtggcgaatccacctgagttcgcggtctggtcattcgagtcctttgat
agcgcgcagaaagtgatactggatctcggaatgcacacggcctacaaacacagctcaatc
gtcatggcactgtactgtcccttctggatgctgaacaagaccggcctgatgttatcttac
agaaagtcgagtaagggtggcaaagaacattcgagtccgatcaagaaattcgtttccact
atgaaaccccatcagcaacggtacaggaggaggaaaacgcgcgcgacaacggacgattac
ttgaatgtcctgtatcatccggagcactttaaggggcccattctattctcatttcgttcc
aaggctttcttcggtaaaaagaaggccatgatcagagtggaagatggagagtggtccgac
aaattctcgatcgacgttgcgggcagcgagggtgtggtggcctgcaagtacaacggaatg
acatatcagatcggggtgcacaatcagctgacgtacaactcgttgaccaagcaaatcacg
ttcacaccctactacatactcatcaataatgcggattttctcatagaatgccaagagggc
gatcgtccggcggatcctataatcaaggtggctgccggcgaatgcgcagctttgtggcct
cgaatcgagcatgagaacaaaacgttgagagccaaagttgcgggtcaaccggaaaaaact
gcagcattcatttatactgacagccatacaactctattgaaattggataataagtacgga
gggatcaatgtggatgtgcaaatcagcgaaggcggtgtctatatctccttgtcggcatat
agttcaggcaacgcaccggctctaatcatcaatcatactccgcataccatcaatttctgg
gagaagggctcgatcaatgtcaggtccgtgcagtcatacaacaggatgttttacacctgg
gaaaatccagctggtccgcgaaaactcgtctgggaagataacaacggcaaagagtttgaa
gacaatcttcgtaaggataatctcggtgccttccaattgccggatataaacgaggaactg
ttccacgtgtcgtttctagatggcatccagcgagtgcttctgttcaccacgaatttaaag
atcgccgaggattgtcaactggctggtgatctcgaagtgattgatcaggaaatcatgttg
aacattcacggcattgggttttctcttgtgaacaatatcaccaaatccgagttgttatac
atgtgcatcgctagttccggaattatatgggagacccgcaagtcccccggcggccgatgg
cgagcattaaacgccaaggaagttaatgctatcgaagagggatatcagcgatacatgaag
gaattacagattggcaaggacgcagactatcgattgatgctggagccgaaattaatggtg
gattatctgaacatggagatgctgaaaccacatcgtaggtacatgcgacgtacatttcag
actggactttggctacaatatcgtacctcggcgcatcaggtacagttgcacgcaaaaatc
aacaggctgcagatcgacaatcaattatcggagtgcgttttcccggttatattggctccg
gttccattgccaaaaagtgtaacgcagagcacagtggtgaaaccttttgcggagctcagt
atggtcaaacgcctgttagagcacagtaccgtacaacaattccgatactttaaagttctc
gtacaagagtttcacatcaaagtggacattgtctttctaaatgcgataataggcctcttc
gaggcggacgaggtcaacgacgcggaggagagtgcgctatttcgtatcgatatgaagctg
gtcaacgaaccacttatgtaccacgtcaacctgatcaccacagccgagcagaagaacttt
ttcgatttattgcacttctcgccgcttaagatacacatcagtttttcgatgactggcagt
ggaggtggaccctctgcaataccacaagtacttaacgtgttgttgcaaggaatcggcgta
acactgacggatattaacgacatcgtgttcaaattggcatatttcgagagaaactatgtg
ttcatgacaaacaaacaactcatctccgaggcaaccactcattacgcaggccaagcgatc
aagcaagcctatgtgctcgtgctaggacttgatgtcatcggtaatccgtacgggcttgtg
gtcgggactatgaagggcatcgaggatttgttctacgaacccttccaaggggccatacag
ggtccgggagagttcgcggagggcctgtttctcggggtgcgcagcatgttgggccacacc
gtcggcggaatggcgggcgccgtatcgaaaatcacgggagcgatgggcaaaggtatagct
gctctgactttcgataaggattaccaacgaaagagacaagaacagctcaacaagcaaccc
gccaacttacaagaaggtcttgctcgaagcgggaagggcttagtaatgggcgtagtcgac
ggtgtaacgggtgtggtaatgaagcctatatcaggagcgaaggaggaaggagtagaaggg
ttctttaaaggattcggaaaaggtgtcgttggactcgtcaccaggcctactgccggtgtt
attgactttgcgagtggttcttttggagctgtcagacgagctacggaactaaatgaggag
gcaaggagagtacgatcgcctagatttctgcaaccagacagtctcgttagaccttacata
aaggatgaagccgaaggcaacaagatattgatggaactggagaaaggaaagtacgcacat
acagacgtttacatctatcacatatttattaacaaagacgtgctgttgctcaccgacaaa
agattatcatacctcgaacatagtgatctgtttggtggttggcgggttgactggactcat
acatggaacgagtttggcgaatcgccaaagatcgtggaaagaggtgtgcagatctttctt
aaagacatcagcaagaaaaagagacttggtggcttttttggcagtgtggatcagtcaaag
atacttttaataacagatcataatattaaacagttattgtacaataaaatacaggagcag
attaaccaatacagagtataa
DBGET
integrated database retrieval system
