Polyergus mexicanus: 138945197 Help Entry 138945197         CDS       T10742                                  Symbol Sf3b3 Name (RefSeq) splicing factor 3B subunit 3   KO K12830   splicing factor 3B subunit 3 Organism pmec  Polyergus mexicanus Pathway pmec03040   Spliceosome Brite KEGG Orthology (KO) [BR:pmec00001]  09120 Genetic Information Processing   09121 Transcription    03040 Spliceosome     138945197 (Sf3b3)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:pmec03021]     138945197 (Sf3b3)    03041 Spliceosome [BR:pmec03041]     138945197 (Sf3b3)    03036 Chromosome and associated proteins [BR:pmec03036]     138945197 (Sf3b3) Transcription machinery [BR:pmec03021]  Eukaryotic type   RNA polymerase II system    Coactivators     SAGA/TFTC/STAGA complex      138945197 (Sf3b3) Spliceosome [BR:pmec03041]  Complex A   U2 snRNP components    U2 snRNP specific factors     138945197 (Sf3b3)  Complex B     138945197 (Sf3b3)  Complex C    U2 SnRNP specific factors     138945197 (Sf3b3) Chromosome and associated proteins [BR:pmec03036]  Eukaryotic type   Histone modification proteins    HAT complexes     STAGA complex      138945197 (Sf3b3)     TFTC complex      138945197 (Sf3b3) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  Beta-prop_RSE1_1st Beta-prop_RSE1_2nd CPSF_A Beta-prop_VPS8 Motif Other DBs NCBI-GeneID:  138945197 NCBI-ProteinID:  XP_070172650 LinkDB All DBs Position Unknown AA seq 1217 aa AA seqDB search MYLYNLTLQRATGITHAVHGNFSGSKMQEILVSRGKSLELLRPDPNTGKVHTLLTVEVFG IIRSLMAFRLTGATKDYIVVGSDSGRIVILEYIPAKNMFDKVHQETFGKSGCRRIVPGQY LAIDPKGRAVMIGAIEKQKLVYILNRDAEARLTISSPLEAHKSNTLVYHTVGVDVGFDNP MFACLEIDYEEADSDPTGDAAVKTQQTLTLYELDLGLNHVVRKYSEPLEEHANFLVSVPG GNDGPSGVLICSENYLTYKNLGDQHDIRCPIPRRRNDLDDPERGMIFVCSATHKTKSMFF FLAQTEQGDIFKITLETDEDMVTEIKLKYFDTVPVAASMCVLKTGFLFVASEFGNHYLYQ IAHLGDDDDEPEFSSAMPLEEGDTFFFAPRPLRNLVLVDEMDSLSPIMACQVADLANEDT PQLYIACGRGPRSTLRVLRHGLEVSEMAVSELPGNPNAVWTVKRRIDEEYDAYIIVSFVN ATLVLSIGETVEEVTDSGFLGTTPTLSCSALGEDALVQVYPDGIRHIRADKRVNEWKAPG KKTIVKCAVNQRQVVIALTGGELVYFEMDPTGQLNEYTERKKMPSEVMCMALGNVAVGEQ RSWFLAVGLQDNTVRIISLDPSDCLAPRSMQALPAAAESLCIVEMGAKEADNSEDSAPQQ SSLYLNIGLQNGVLLRTVLDPISGDLADTRTRYLGSRPVKLFRIRMQGNQAVLAMSSRSW LSYYHQNRFHLTPLSYESLEFASGFSSEQCPEGIVAISTNTLRILALEKLGAVFNQVSFP LEYTPRKFAIHADSAHLVVIETEHNAYTEETKQQRRLQMAEEMQEAAGAEEAAVARELAE AFLSEEPNEAVFGAPRAGPGLWASLLRIMAPTTGQTFEVHRFEQNLAALCLCLVKFANQG DQLFLIVGIAKEFQLNPRVSNGGFLYTYKVNTECTSIELLHKSPLDEVPLAICPYQGRVL VGVGRMLRLYDMGKKKLLRKCENKHIPNAVVSINAIGQRIYVSDVQESVYAVRYKRQENQ LIVFADDTHPRWITTTCVLDYDTVATADKYGNIAVIRLATGINDDVDEDPTGNKALWDRG LLNGASQKADTVACFHVGETVMSLQKATLIPGGSESLVYTTLSGTVGVLVPFTSHEDHDF FQHLEMHMRSEHPPLCGRDHLSFRSYYYPVKNVIDGDLCEQFNSIEPVKQKSISGDLERT PSEVSKKLEDIRTRYAF NT seq 3654 nt NT seq  +upstreamnt  +downstreamnt atgtatttgtataatttgactctacaacgcgccaccggcatcacgcacgcggtgcatggc aatttctccggcagcaagatgcaggagattcttgtttcccgtggcaaatcgttggaattg ttgcgaccggatccgaacacaggaaaggttcacactctgctgactgttgaagtttttggc attatcagatctctgatggcatttagattgactggtgcgacgaaagattatattgtcgtg ggttcggattccgggcgcatagtaattttagaatatattcccgccaagaatatgttcgac aaggtacatcaggagaccttcggcaaaagtggttgtcgacgcatcgtacctggccagtat ctagccattgatccaaaagggagagcagttatgataggcgctattgaaaaacagaagctc gtgtacattctaaacagagacgccgaggcccgtttgacgatttcctctccattggaagct cataaaagcaacacattggtatatcacacggtcggtgtcgacgttggcttcgataatccc atgtttgcgtgtctagagattgattacgaggaagccgacagcgatcccacgggcgatgcg gcggtgaagacccagcaaactctgacactgtacgagcttgatctcggtctaaatcacgtg gtgcgaaagtacagcgagccgctggaggagcacgctaacttccttgtatccgtgccgggc ggcaacgacggtccgagcggtgtgctaatttgctccgagaattatctcacttacaaaaac ctcggtgatcagcacgatattcgttgcccgatcccacgacgccgcaacgacttggacgat cccgagagagggatgatattcgtgtgctcggccacgcacaagacgaaaagcatgtttttt tttctggcgcagacggagcagggagacattttcaaaatcacactcgagacagatgaggac atggttaccgaaatcaagctcaagtacttcgatacagtaccagtcgcagcgagtatgtgt gttctcaaaacgggtttcctgtttgtcgcctcggaattcggcaaccattacctgtatcaa atagcgcatttgggcgacgatgacgatgagcccgaattcagttcagcgatgccgctcgag gaaggcgacacctttttcttcgcaccacggccacttcgtaatctggtactagttgatgaa atggatagtctttcgcccataatggcttgccaggtggcagatctggcaaacgaagatacg ccacaattgtacattgcttgcggtcgaggaccgcgatctaccctgcgcgtgctacgccat ggtctcgaggtttccgagatggccgtgagtgagttgcctggtaatccaaacgccgtatgg actgtgaaaaggagaatcgatgaggaatatgatgcatacatcatagtgtccttcgtgaat gccacactcgtactcagtattggcgagactgtcgaggaagtgacggattcgggtttcctt ggtacaacaccaaccttgagttgttcagcattgggcgaggacgcattggtgcaggtgtat cctgacggtatacgtcatatacgagcagataagcgtgtcaatgaatggaaggcacctggt aagaagaccatcgtaaaatgcgcggttaatcaacgtcaagttgtaatcgctcttactgga ggggaactcgtctacttcgaaatggatcccactgggcaattgaatgaatatacggaaaga aagaagatgccgtcggaagtgatgtgcatggctctcggaaatgttgccgtgggtgaacaa cgctcgtggtttctggccgtcggcctgcaggacaatacagtgagaataatatcgttggat ccctcggattgtctagcgccgagaagtatgcaggcgttgccggcggctgcagagagtcta tgtatcgtagaaatgggtgccaaggaggccgacaattctgaggattcggcgccacaacaa tccagtttatatttaaacataggtttacagaatggcgtattgctcagaactgtgttagat ccgatttccggcgatctcgcggacacgagaacacgctacctgggttcccgccccgtcaag ctcttcagaatacgtatgcagggcaatcaagctgtattggcgatgagcagtcgatcgtgg ctgagttactatcatcagaatcgctttcatctcacacctctgtcgtacgaaagtctcgaa tttgcatctggctttagttccgagcaatgcccggaaggtatagtcgccatatcgacgaac acattgagaattctggcgctcgagaaacttggcgctgtgttcaatcaagtgagctttcca ttggaatatacaccgcggaagttcgcgattcacgccgattccgcgcatctggtagtcatc gagaccgagcacaacgcttacacggaagaaacgaaacaacagaggagactacagatggcg gaggagatgcaagaagcggccggcgccgaagaggctgccgtcgctcgggagttagcggag gcgttcctatcggaggagccgaatgaggctgttttcggtgccccgcgagcgggaccaggc ttgtgggcctcgctgctgagaataatggcaccgactaccggccaaacgttcgaagtgcat cgtttcgagcaaaatctagctgcattatgtctctgtctcgtgaagtttgccaatcaagga gatcaattgttccttatcgtcggaattgcaaaggagtttcaattaaatcccagggttagc aacggcggttttctttacacatacaaagtaaatacggagtgtactagtatcgagctgctg cacaaatctccattggacgaagtaccgctggccatttgtccgtatcagggcagagtactg gtcggtgtgggtaggatgctgcggctttacgatatgggtaagaagaagttactgcgcaag tgcgagaacaagcacatacccaacgccgtggtctcgatcaatgccatcggtcaacggatt tacgttagcgatgtacaggagtctgtatatgccgtgaggtacaaacgccaggaaaatcaa ttgatcgttttcgcggatgatacgcatcccagatggatcacaactacatgcgtgttggat tacgatactgttgccaccgctgataaatacggaaatatagctgtgatacggttggcgacc ggcattaacgacgatgtagacgaggatcctacggggaacaaggctctgtgggaccgagga ttgctgaatggcgccagccagaaagcggacacggtggcttgctttcacgtaggcgaaact gtgatgtcgctgcagaaggcgacccttatacccgggggttccgagagcttggtttatacg actcttagcggaacggtgggtgtcctcgtgccgttcaccagtcacgaggatcacgatttc tttcagcatttggagatgcacatgcgatccgagcacccgcctttatgcggtagggatcac ctgtctttccggtcgtactactacccagtgaagaatgtcatcgacggcgatctctgcgag caattcaattcgattgaacccgttaagcagaagagtatctctggcgatctcgagaggaca ccgtccgaggtgtcaaagaaactggaggacatacgtacacgatacgcattctaa

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