Pseudomonas mediterranea: E3Z27_00015
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Entry
E3Z27_00015 CDS
T08284
Symbol
recF
Name
(GenBank) DNA replication/repair protein RecF
KO
K03629
DNA replication and repair protein RecF
Organism
pmed
Pseudomonas mediterranea
Pathway
pmed03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pmed00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
E3Z27_00015 (recF)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pmed03400
]
E3Z27_00015 (recF)
DNA repair and recombination proteins [BR:
pmed03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
E3Z27_00015 (recF)
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Ortholog
Paralog
GFIT
Motif
Pfam:
SMC_N
AAA_21
AAA_23
AAA_16
AAA_13
AAA_15
AAA_29
AAA_27
Aq_aa27
Motif
Other DBs
NCBI-ProteinID:
QHA80175
LinkDB
All DBs
Position
2650..3753
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AA seq
367 aa
AA seq
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MSLSRVSVTAVRNLHPVTFSPSPRINILYGANGSGKTSVLEAVHLLGLARSFRSTRLLPV
IQYDQLACTVFGQVELAEGGHSALGISRDRQGEFQIRIDGQNARSAAQLAEILPLQLINP
DSFRLLEGAPKIRRQFLDWGVFHVEPRFMATWQRLQKALRQRNSWLRHGTLDAVSQAVWD
RELCQASAEIDEYRRAYIKALKPVFEQTLSELVELEGLTLSYYRGWDKDRELSAVLAGSL
QRDQQMGHTQAGPQRADLRLRLGAHNAADILSRGQQKLVVCALRIAQGHLVSQARRGQCI
YLVDDLPSELDEAHRRALCRLLEDLRCQVFITCVDHELLREGWQTETPVALFHVEQGRIT
QTHDHRE
NT seq
1104 nt
NT seq
+upstream
nt +downstream
nt
atgtccttaagtcgcgtctcggtcaccgcggtgcgtaatctgcacccggtgaccttctcc
ccttccccccgcatcaatatcctttacggcgccaacggcagcggcaaaaccagcgttctg
gaagccgtacacttgctggggcttgcccgttcgtttcgcagcacccgcctgttaccggtc
atccagtacgatcaactggcctgtacggtgttcggacaagtggagttggcggaagggggt
catagcgcgttgggcatatcacgggaccggcaaggcgagttccagattcgcatcgacggc
cagaacgcccgcagtgccgcacaactggcggagatcctgccgttgcagttgatcaacccg
gacagtttccgcctgctggaaggcgcaccgaaaattcgccggcagttcctggactggggt
gtgtttcacgtggagccgcgtttcatggcgacctggcagcgcttgcagaaggcgctgcgc
cagagaaactcttggctgcggcatggtacacttgacgccgtttcgcaagcggtttgggac
agggaactgtgccaggccagcgctgaaatcgatgaataccgccgcgcttacatcaaagcc
ttgaaaccggtcttcgagcagaccttgagcgaactggttgagctcgagggcctgacgctc
agctattaccgaggctgggacaaggatcgggaattgagtgccgtactggctggctcgctg
caacgggaccagcagatgggccacacccaggctggacctcaacgcgctgacttgcgcctc
agattgggcgcccataacgccgcggacattttgtcccggggtcagcagaagttggtggtg
tgtgctttgcgtatcgcccaggggcacctggtcagccaggcccgtcgcggtcagtgtatt
tatctggtggatgacctgccgtccgagctggacgaggcccaccgtcgagcgctttgccgt
ttgctggaagacttacgctgccaggttttcatcacctgtgtagatcacgaattattgagg
gaaggctggcagacggaaacgccagtcgctctgttccacgtggaacagggccgtatcacc
cagacccacgaccatcgggagtga
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