Pseudomonas mediterranea: E3Z27_00605
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Entry
E3Z27_00605 CDS
T08284
Name
(GenBank) LysR family transcriptional regulator
KO
K27042
LysR family transcriptional regulator, trpBA operon transcriptional activator
Organism
pmed
Pseudomonas mediterranea
Brite
KEGG Orthology (KO) [BR:
pmed00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pmed03000
]
E3Z27_00605
Transcription factors [BR:
pmed03000
]
Prokaryotic type
Helix-turn-helix
LysR family
E3Z27_00605
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
HTH_1
LysR_substrate
HTH_20
HTH_5
MarR_2
HTH_30
HTH_IclR
HTH_24
I-HmuI_NUMOD-like
HTH_23
Motif
Other DBs
NCBI-ProteinID:
QHA80284
LinkDB
All DBs
Position
complement(125667..126560)
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AA seq
297 aa
AA seq
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MRHDLPPLNALRAFEATARLNSVSQAAEQLHVTHGAVSRQLKVLEEHLGVSLFVKDGRGL
KLTDAGLRLRDASAEAFERLRSACAELTQSTADAPFVLGCSGSLLARWFIPRLGRLNADL
PDLRLHLSAGEGDLDPRRPGLDALLVFAEPPWPADMQVYELAGERIGPVISPRYTGFVDL
KSAPASALLSESLLHTTSRPQAWPTWARQNDLDPEALRFGQGFEHLYYLLEAAVAGLGVA
IAPEPLVAEDVRAGRLVAPWGFVETPARLALWLPKRASDGRARQLAQWLRHELSQPA
NT seq
894 nt
NT seq
+upstream
nt +downstream
nt
atgcgccacgatctgccaccgctcaacgccttgcgtgccttcgaagccaccgctcgcttg
aatagcgtaagccaggccgccgaacagctgcacgtgactcacggcgccgtcagccgacaa
ttgaaggtgttggaggagcatctgggcgtcagcctgttcgtcaaggatggacgcggcctg
aaactcacagatgcgggcctgcgcctgcgtgacgccagcgccgaagctttcgagcggcta
cgtagcgcctgcgccgaactcacccaaagcacggcggatgctccgtttgtgctgggctgc
tcgggcagtttgttggcgcgctggttcattcctcgcctgggccgactcaatgccgatctg
ccggacttgcgcctgcatttgtccgccggcgaaggtgatctggacccaaggcgcccaggg
ctggacgctctactggtctttgccgagccgccctggccggcagacatgcaggtgtatgag
ctggctggcgagcggatcggcccagtcatcagtccgcgttataccggcttcgtcgatctg
aaatccgccccggccagtgcgctgttgagtgagtcgttgttgcacaccacgtcccgccca
caggcctggccgacctgggcgcggcaaaacgacctcgaccccgaagcactgaggttcggc
cagggtttcgagcatttgtattatttgctggaggctgcggtggcggggttgggtgtagcc
atcgctcccgagccgctggtggccgaggatgtccgcgccggacgcctggtcgcgccatgg
ggcttcgtcgaaaccccggcgcgactggcattatggctccccaagcgcgcctcagacggc
cgcgcccgacagttggcccagtggctcaggcatgagctgagccaaccggcttaa
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