Pseudomonas mediterranea: E3Z27_00970
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Entry
E3Z27_00970 CDS
T08284
Name
(GenBank) type I secretion system permease/ATPase
KO
K12541
ATP-binding cassette, subfamily C, bacterial LapB
Organism
pmed
Pseudomonas mediterranea
Pathway
pmed02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
pmed00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
E3Z27_00970
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pmed02000
]
E3Z27_00970
02044 Secretion system [BR:
pmed02044
]
E3Z27_00970
Transporters [BR:
pmed02000
]
ABC transporters, eukaryotic type
ABCC (CFTR/MRP) subfamily
ABCC-BAC subgroup
E3Z27_00970
Secretion system [BR:
pmed02044
]
Type I secretion system
Adhesin protein transporter
E3Z27_00970
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC_membrane
SMC_N
AAA_21
Peptidase_C39
MMR_HSR1
RsgA_GTPase
DUF87
AAA_22
AAA_29
Gtr1_RagA
Motif
Other DBs
NCBI-ProteinID:
QHA80343
LinkDB
All DBs
Position
221262..223418
Genome browser
AA seq
718 aa
AA seq
DB search
MESEVSRVELVHDPRTLHDDPLLDGLLALCMLHQKPASAAMLTTGLPLPKQRLSVDLLSR
AAARAGLQGRVLQRRLEQIPTIAMPALLLLKDGRSAVLLGWVGDDQARLLLSESDGGEVT
VSRELLADDYSGKVFFAQPQHKFDVNHGTLIPRARSWFRDTLKRSRWLYADAIAASLLIN
IIAMAAPLFVMNVYDRVVPNQAESTLWVLAIGITGAYLFDLILKMLRSLCLDLAGKKTDL
IISATLFERIVGMAMKYRPARVGSFAQNIHEFQSLRDFLASLTLTSLIDLPFTLLIFMVI
AIIGGHLVWIPVLAFPIALLIGYALQKPLVATMERTMALGAERQSSLIETLAGLDAVKVN
NAESERQYQWEQTIGTLSRLELRVKMLSGLAMNITLLIQQLAGVVMIVFGVYLIIAGNLS
MGGLVACYMLSGRALSPLASLSGLLTRYQQARVTMTSVDQMMELPQERNFEERPLSRKVL
QGAIECRQLNFTYPNQQNAALKNINLVIKPGEKIGIIGRSGSGKSSLAKLLVGLYQPDDG
ALLVDGVDIRQIDVSELRYNIGYVPQDIQLLAGTLRDNLTSGARYVEDELVLQAAELAGV
HEFARLHPQGYELQVGERGQNLSGGQRQNVALARALLLNPPILLLDEPTSAMDNTGEERL
KQRLAAVVENKTVLLVTHRASLLSLVDRLLVIDRGQILADGPKAAVMEALKKGQISVA
NT seq
2157 nt
NT seq
+upstream
nt +downstream
nt
gtggaatcagaagtcagtcgagtcgaactagtccatgacccgcgcacgctgcacgacgac
ccgttgctggacgggttgctggcgctctgcatgctgcatcagaaaccggccagcgcggcg
atgctcaccaccggcctgccgctgcccaagcagcggctgagcgtcgatttattgtcgcgt
gcggcggcacgggccggtttacagggccgggtgctgcaacgccggctcgagcagatcccg
accattgccatgccggccctgttgctgctcaaggatggtcgcagtgcggtattgctgggc
tgggtcggcgacgaccaggcgcggctgctgctcagcgaaagcgacggcggagaagtgacg
gtcagccgcgagctgctggccgacgactacagtggcaaggttttcttcgcccaaccccag
cacaaattcgatgtgaaccacggcacgctcattccccgggcgcgttcgtggtttcgcgac
accctcaagcgttcccgttggctgtatgccgatgcgattgccgccagccttctgatcaac
atcatcgccatggctgcgccgctgttcgtgatgaacgtctatgaccgcgtggtgccaaac
caggccgagtcgaccttgtgggtgttggccatcggcattaccggtgcctatctgttcgac
ctgatcctgaagatgttgcgcagcctgtgcctggacctggcgggcaagaaaaccgacctg
atcatttccgccacgctgttcgagcgaatcgtcggcatggcgatgaagtaccgtccggca
cgggtcggcagctttgcccagaacatccatgagttccagagcctgcgggacttcctcgcc
tcgctgaccttgaccagcctgatcgatctgccattcaccctgttgatcttcatggtcatc
gcgattatcggcggacacctggtgtggattccggtgttggctttccctattgccttgttg
atcggctacgccttgcagaagcccctggtggcgaccatggagagaaccatggccctgggc
gccgagcgccagtccagcctgatcgagacccttgccggcctggatgcggtgaaggtcaac
aacgccgagagcgagcgccaataccaatgggagcagactatcggcaccctcagccgtctc
gaactgcgggtaaaaatgctctccgggctggcgatgaacatcactttgttgatccagcag
ttggctggcgtggtcatgatcgtcttcggtgtctacctgatcatcgccggtaacctgagc
atgggtgggctggttgcctgctacatgctcagtggccgcgccctcagcccgttggcgtcg
ctgtcgggcctgctgacccgctatcagcaggcgcgggtgacgatgacgtccgtcgaccag
atgatggagctgccccaggagcgcaatttcgaagagcgtccgctgagccgcaaggtcctg
cagggcgccatcgagtgccggcaactgaatttcacttatccgaaccagcagaacgccgcg
ctgaagaacatcaacctggtgatcaagcccggtgaaaaaatcggcatcatcggccgcagc
ggttcgggcaagagctccctggcgaagttgctcgtgggcctttaccagccggacgatggc
gccttgctggtggacggcgtggacatccgccagatcgatgtcagcgagttgcgctacaac
atcggctatgtcccccaggacattcagctgctggccggtaccttgcgggacaacctgacc
tcaggggcccgttatgtcgaagacgagttggtgctccaggccgccgaactggcgggcgtg
catgagttcgcccgtctgcatccccagggttatgagctacaggttggcgagcgcgggcag
aacctgtccggcggccagcgccagaacgttgccctggctcgggcgctgctgctcaaccca
ccgatcctgctgctcgatgagcccaccagcgccatggacaacaccggtgaggagcgcctc
aagcagcgcctggccgctgtggtggagaacaagaccgtgctgctggtgacgcaccgggca
tccttgctgtcgctggtggatcgcctgctggtgatcgaccgcgggcagatcctggccgac
ggcccgaaagctgccgtaatggaagcgttgaagaaggggcagatcagtgttgcttaa
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