Pseudomonas mediterranea: E3Z27_01450
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Entry
E3Z27_01450 CDS
T08284
Symbol
rfbC
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
pmed
Pseudomonas mediterranea
Pathway
pmed00521
Streptomycin biosynthesis
pmed00523
Polyketide sugar unit biosynthesis
pmed00541
Biosynthesis of various nucleotide sugars
pmed01100
Metabolic pathways
pmed01110
Biosynthesis of secondary metabolites
pmed01250
Biosynthesis of nucleotide sugars
Module
pmed_M00793
dTDP-L-Rha biosynthesis, Glc-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
pmed00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
E3Z27_01450 (rfbC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
E3Z27_01450 (rfbC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
E3Z27_01450 (rfbC)
Enzymes [BR:
pmed01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
E3Z27_01450 (rfbC)
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Motif
Pfam:
dTDP_sugar_isom
Motif
Other DBs
NCBI-ProteinID:
QHA80434
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All DBs
Position
complement(335958..336503)
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AA seq
181 aa
AA seq
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MNVIATRLPDVLIIEPKVFGDDRGFFYESFNARAFAEATGCDLQFVQDNHSRSTKGVLRG
LHYQIEQAQGKLVRVIAGEVLDVAVDIRRSSPTFGQWESVRLSAQNQRQLWIPPGFAHGF
MVLSESADFLYKTTDYYAPVAERCIRWDDPDLAIDWELEGAPTLSSKDQNGKFLHEADLF
P
NT seq
546 nt
NT seq
+upstream
nt +downstream
nt
ttgaacgtcatcgccacccgactgccggatgtcctgatcatcgagccgaaagtcttcggc
gacgaccgcggctttttctacgaaagcttcaatgcccgggcattcgccgaggccactggc
tgcgacctgcagttcgtccaggacaaccattcacgctcgaccaaaggcgtgctgcggggc
ctgcattatcagatcgaacaggcccaggggaagctcgtgcgagtcatcgccggcgaagtg
ctggacgtggctgtggacattcgccgcagctcgcccactttcggccagtgggagagcgtg
cgtctgtcggcgcagaaccagcggcagctgtggattccgccaggcttcgcccacggtttc
atggtactgagcgagtcagcggattttctctataaaaccaccgattactacgcgcccgtg
gccgaacgctgcatccgttgggacgatccggacctggccatcgactgggagctggagggc
gcgcccaccctctcgtccaaggaccagaacggcaagttcctgcatgaggccgaccttttc
ccatga
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