Pseudomonas mediterranea: E3Z27_01790
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Entry
E3Z27_01790 CDS
T08284
Name
(GenBank) HAMP domain-containing protein
KO
K03406
methyl-accepting chemotaxis protein
Organism
pmed
Pseudomonas mediterranea
Pathway
pmed02020
Two-component system
pmed02030
Bacterial chemotaxis
Brite
KEGG Orthology (KO) [BR:
pmed00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
E3Z27_01790
09140 Cellular Processes
09142 Cell motility
02030 Bacterial chemotaxis
E3Z27_01790
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
pmed02035
]
E3Z27_01790
Bacterial motility proteins [BR:
pmed02035
]
Flagellar system
Chemotaxis proteins
MCPs
E3Z27_01790
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MCPsignal
dCache_1
HAMP
MCP-like_PDC_1
dCache_2
Arfaptin
Phage_TAC_3
Phage_DsbA
Motif
Other DBs
NCBI-ProteinID:
QHA80496
LinkDB
All DBs
Position
complement(405003..406883)
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AA seq
626 aa
AA seq
DB search
MKFSHKILLAAALVVAVAFACFILFNDYRQRQSLHNSTETSMQELGNLTSRNIQTWVEGR
IQLLQSLAQQIAIDGNSAASLKRAIDLPAYTGNFQLSYFGGVDGVMFSVPAGNRAPDYDP
RARGWYKAANSAQQTIVTEPYIAASSGKLVITVATPVQRQNQMIGVAGADIDLSSVSAII
NSLNFGGHGHAFIVSADGKILIHPDSKRILKTLAEAYPNGAPQVSPGMKEVELDGKTQFI
SFTRVNGVPGADWYVALVLDKDTALAMLSEFRTSALIAMIIAVVFIIALLGMLIRVLMQP
LLTMGRAMHDIAEGEGDLTRRLTIHGQDEFGALGTSFNRFVERIHTSIREVASATGQVNE
VALRVVSASNSSMFNSDQQASRTSSVAAAINQLGAAAQEIAQNAALASQHSSEARNLAED
GQQVVDKTIAAMQQLSAKISDSCGNIETLNSNTVNIGQILEVITSISQQTNLLALNAAIE
AARAGEAGRGFAVVADEVRNLAHRTQDSAQQVQKMIEELQVGAREAVLTMTDSQRQSESS
VGIANQAGERLGSVTQRIGEIDGMNQSVATATEEQTAVVESINVDISEINTLNQEGVENL
QATLRACTDLEQQAARLKQLVGSFRI
NT seq
1881 nt
NT seq
+upstream
nt +downstream
nt
atgaaattcagccacaaaatcctgctggccgcagcccttgtggtagccgttgcgttcgcc
tgtttcatcctgttcaacgactaccgtcagcgtcaaagcctgcacaacagcaccgaaacg
tccatgcaggaactcggcaacctgaccagccgtaacattcagacgtgggtcgaagggcgt
atccagttgctgcaatccctggcccagcagatcgccatcgacggcaacagcgctgccagc
ctcaagcgggccatcgacctgcccgcctataccggcaacttccagctcagctacttcggt
ggcgtcgacggcgtgatgttctcggtgccggccggtaatcgcgcgcccgactacgaccct
cgcgcccgtggctggtacaaggccgccaacagcgcacagcaaaccattgtcaccgaaccc
tacattgccgcctcgtcgggcaaactggtgatcaccgtcgcgaccccggtacagcgtcag
aaccagatgatcggcgtggcgggtgcggacatcgacctgtcgagcgtcagcgccatcatc
aactcgctgaacttcggcggccacggccatgcattcatcgtcagcgccgatggcaagatc
ctgatccatcccgacagtaaacgtatcctcaagaccctggccgaggcctaccccaacggt
gcccctcaagtcagcccgggcatgaaggaagtcgaactcgacggcaagacccagttcatc
tccttcacccgggtcaatggcgtgccaggcgcagactggtacgtggcactggtgctcgac
aaggacaccgcgctggccatgctcagcgagttccgtacctcggcgctgatcgccatgatc
attgccgtggtcttcatcatcgccctgctgggcatgttgatccgcgtgctgatgcaaccg
ttgctgaccatgggccgtgcgatgcacgacatcgccgaaggtgaaggcgacctgacccgc
cgcctgaccatccacggccaggatgaattcggcgccctgggtacctccttcaaccgtttc
gtcgaacgcatccacacctcgatccgtgaagtggcctcggccaccggccaggtcaacgaa
gtggcgctacgcgtggtcagcgcctccaactcatcgatgttcaattccgaccagcaagcc
tcgcgcaccagcagcgtagcggcggccatcaaccagctcggcgccgctgcccaggaaatc
gcccagaacgccgccctcgcttcgcaacactccagcgaagcccgaaacctggccgaagac
ggtcagcaggtggtggataagaccatcgctgccatgcagcagctgtcggccaagatcagc
gattcgtgcggcaacatcgaaaccctgaacagcaacacggtgaacatcggccagatcctc
gaagtcatcaccagcatttcccagcagaccaacctgctcgccctcaacgcagccatcgaa
gcggcccgcgcgggtgaagccgggcgcggatttgccgtggtggccgatgaagtgcgcaac
ctggcccaccgcacccaggattcggcgcagcaagtgcagaaaatgatcgaagagttgcaa
gtcggcgcacgggaagcggtgctgaccatgaccgacagccagcgccagagcgaaagcagc
gtcggcatcgccaaccaggccggcgagcgcctgggcagcgtgacccagcgcatcggcgaa
atcgacggcatgaaccagtccgtggccaccgccaccgaagaacagaccgccgtggtggag
tcgatcaacgtcgacatcagcgagatcaacacgctgaaccaggaaggtgtggaaaacctg
caagccacgttgcgggcctgtaccgacctcgaacagcaggcggcgcggttgaagcagttg
gtgggcagcttccggatctag
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integrated database retrieval system