Pseudomonas mediterranea: E3Z27_01890
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Entry
E3Z27_01890 CDS
T08284
Name
(GenBank) HAMP domain-containing protein
KO
K03406
methyl-accepting chemotaxis protein
Organism
pmed
Pseudomonas mediterranea
Pathway
pmed02020
Two-component system
pmed02030
Bacterial chemotaxis
Brite
KEGG Orthology (KO) [BR:
pmed00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
E3Z27_01890
09140 Cellular Processes
09142 Cell motility
02030 Bacterial chemotaxis
E3Z27_01890
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
pmed02035
]
E3Z27_01890
Bacterial motility proteins [BR:
pmed02035
]
Flagellar system
Chemotaxis proteins
MCPs
E3Z27_01890
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HBM
MCPsignal
HAMP
DUF948
Flavi_capsid
Motif
Other DBs
NCBI-ProteinID:
QHA80515
LinkDB
All DBs
Position
complement(430520..432436)
Genome browser
AA seq
638 aa
AA seq
DB search
MFSWLTEKLGNVSVNRKLGVGFGLVLLMTLLSTLAGWNSLSSVISRSDKQASIASLNELA
KDLRIASLDYEMRRGEQGPTAVSELVGKLQESIQTALKQFVRPTDQELLNQQLAILEDFK
RSFGELTQATQNRESARSKLGANADNAVAKVTEVENALRQGDSVAPFNNVVELSKLLQQA
RYQVRGYTYSGKADAEQPALDAIENVLKNLQDLPGKLPEQHTANLQQAAESMKAYRAAVS
QFRDSQVVSASTFKKMAEQESHLNELNNRMTVSQVEKRDQETAQAKNTLIIVAVLALAFG
VLAAWIITRQIVAPLQQTLSAVERVASGDLSHDLVVARRDEMGQLQGSLQRMTVSLRQLI
SGISEGVTQIASAAEQLSAVTEQTSAGVSSQKVETDQVATAMHEMTATVQDVARNAEEAS
EAAVAADQQAREGERVVGEAIAQIERLANEVGNSTAAMGDLKRESDKIGSVLDVIKSVAQ
QTNLLALNAAIEAARAGEAGRGFAVVADEVRSLAQRTQKSTEEIEELILGLQSGTEKVAS
IMDSSRGLTDSSVELTRRAGSSLENITRTVSAIQSMNQQIAAAAEQQSATAEEINRSVLN
VRDVSEQTSAASEETAASSAELARLGVHLQTLVGRFKV
NT seq
1917 nt
NT seq
+upstream
nt +downstream
nt
atgttcagttggctaaccgaaaagctgggaaacgtaagtgtcaatcgcaagctgggtgtc
ggtttcggcctggtcttgctcatgactctcctgagcaccctcgcgggctggaacagcctt
agcagcgtgatcagtcgctcggacaaacaggcgtccatcgccagcctcaatgagttggcc
aaggatttgcgaattgccagcctcgactacgagatgcggcgcggcgaacaaggccctacg
gccgtcagcgagctggtaggcaagctgcaggaaagcatacagactgccctcaaacagttt
gtgcgaccgaccgaccaagagctgctcaaccagcaactggctatcctcgaggatttcaaa
cgcagctttggcgagttgacccaggcgacacagaaccgcgaatcagcccgatccaagcta
ggggccaacgccgacaatgccgtggcgaaggtgacggaagtcgaaaacgccctgcgacaa
ggcgacagtgtcgcgccattcaataacgtggtggagctgagcaagctgctccagcaagcg
cgctatcaagtgcgtggctacacctacagtggcaaggccgacgccgagcaacccgccctg
gatgccatcgaaaacgtcttgaagaaccttcaagacctgcccggcaaattgccggagcag
cacaccgccaatctgcagcaagccgccgaatcgatgaaggcctatcgtgccgctgtcagc
cagttccgcgactcgcaggtggtcagcgcctcgaccttcaagaaaatggcggaacaagag
agccatttgaatgagctgaataatcgaatgactgtctcgcaggtcgagaaacgcgaccag
gaaaccgctcaagccaagaacaccttgatcatcgtcgccgtcctggcgctggcctttggc
gtactggcggcatggatcatcacccggcagatcgttgctcccctgcaacagaccttgagc
gctgtcgaacgtgtcgcctcgggtgacctcagccatgaccttgtggtcgcccgccgtgac
gaaatgggccaattgcaaggcagcctgcaacgcatgaccgtgagcctgcggcaattgatc
agtggcatcagcgaaggcgtcacccagatcgccagtgccgccgaacagctgtcggccgtg
accgagcagaccagcgccggggtcagcagccagaaggtcgagaccgatcaggtcgccacc
gccatgcacgaaatgaccgccacggtgcaggatgtcgcgcgcaacgccgaggaagcttcc
gaggccgccgtggccgccgaccagcaagcccgcgagggtgagcgagtggtgggcgaagcc
atcgcccagatcgagcggctggccaacgaagtcggcaactccaccgccgccatgggtgac
ttgaagcgcgagagcgacaaaatcggcagcgtcctggatgtgatcaagtctgtcgcccag
caaaccaacctgctggcgctcaacgccgccatcgaagccgcccgcgccggtgaggccggg
cgtggtttcgccgtggttgccgatgaggtccgcagcctggcccaacgcactcagaaatcc
accgaagagatcgaagaactcatcctcgggctgcaaagcggaactgaaaaggtcgcgagc
atcatggacagcagccgcggcctgaccgacagcagcgtcgaactcacccgccgggccgga
agctccctggaaaacatcacccgcacggtctcggccatccaatcgatgaaccagcagatc
gccgctgcggccgagcagcagagcgccaccgccgaagagatcaaccgcagcgtattgaac
gtgcgcgacgtctccgaacagacctccgccgccagcgaagaaaccgccgcctccagcgcc
gaactggcacgtctcggtgtgcatttgcagacgttggtggggcggttcaaggtctag
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