Pseudomonas mediterranea: E3Z27_02525
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Entry
E3Z27_02525 CDS
T08284
Symbol
thiC
Name
(GenBank) phosphomethylpyrimidine synthase ThiC
KO
K03147
phosphomethylpyrimidine synthase [EC:
4.1.99.17
]
Organism
pmed
Pseudomonas mediterranea
Pathway
pmed00730
Thiamine metabolism
pmed01100
Metabolic pathways
pmed01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
pmed00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
E3Z27_02525 (thiC)
Enzymes [BR:
pmed01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.17 phosphomethylpyrimidine synthase
E3Z27_02525 (thiC)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ThiC_Rad_SAM
ThiC-associated
Motif
Other DBs
NCBI-ProteinID:
QHA80632
LinkDB
All DBs
Position
586573..588462
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AA seq
629 aa
AA seq
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MTTKSKNAINLSDSAQVDQQSVQPFTRSQKIYVQGSRPDIRVPMREISLDVTPTDFGGEI
NAPVTVYDTSGPYTDPNVVIDVRKGLADVRSPWIEARGDTERLAGLSSNFGQERLADPEL
TKLRFAHVNNPRRAKPGANVSQMHYARKGIITAEMEYVAIRENMKLEVARAAGLLDQQHA
GHSFGASVPKIITPEFVRDEIARGRAIIPANINHTELEPMIIGRNFLVKINGNIGNSALG
SSIEEEVAKLTWGIRWGSDTVMDLSTGKHIHETREWIIRNSPVPIGTVPIYQALEKVGGV
AEDLTWELFRDTLIEQAEQGVDYFTIHAGVLLRYVPMTAKRVTGIVSRGGSIMAKWCLAH
HKENFLYTHFEDICEIMKAYDVSFSLGDGLRPGSIADANDEAQFGELETLGELTKIAWKH
DVQCMIEGPGHVPMQLIKENMDKQLECCDEAPFYTLGPLTTDIAPGYDHITSGIGAAMIG
WFGCAMLCYVTPKEHLGLPNKDDVKTGIITYKIAAHAADLAKGHPGAQIRDNALSKARFE
FRWEDQFNLGLDPDTARSYHDETLPKDSAKVAHFCSMCGPKFCSMKITQEVREYAANQRI
EAVDVDVAQGMAEQAERFKQEGSQLYKKV
NT seq
1890 nt
NT seq
+upstream
nt +downstream
nt
atgacgacaaaatcaaaaaacgcgatcaacctcagtgattcggcccaggtcgatcagcaa
tcggttcagccttttacccgctcgcaaaaaatctatgtccagggcagccgcccggatatc
cgcgtgccgatgcgcgaaatcagcctcgacgtgacgccgaccgacttcggcggcgagatc
aacgcgccggtgacggtgtatgacacctcgggcccgtacaccgacccgaacgtggtcatc
gacgtgcgcaaaggcctggccgacgtgcgttcgccgtggatcgaggcccgtggcgacacc
gagcgcctggcgggcctgagttccaacttcggccaggagcgcctggccgacccggagctg
accaagctgcgcttcgcccacgtgaacaatccacgccgcgccaagcccggtgccaacgtc
agccagatgcactacgcgcgcaaaggcatcatcaccgccgagatggaatacgtcgccatc
cgcgaaaacatgaagctggaagtggcccgcgccgccggcctgctggaccagcaacacgcc
ggccacagcttcggcgccagtgtgccgaagatcatcacgccggaattcgtccgtgacgag
atcgcccgtggccgcgcgatcatcccggccaacatcaaccacaccgaactggaaccgatg
atcatcggccgtaacttcctggtgaagatcaacggcaacatcggcaacagtgcgctgggt
tcgtccatcgaagaagaagtggcaaagctgacctggggcattcgctggggttcggacacg
gtgatggacctgtccaccggcaagcacatccacgaaacccgtgagtggatcatccgcaac
tcgccggtgcccatcggcaccgtgccgatctaccaggccctggaaaaagtcggcggcgtg
gccgaagacctcacctgggagttgttccgcgatacgctgatcgaacaggccgagcagggt
gtcgactacttcaccatccacgccggcgtgctgttgcgctatgtgccgatgaccgccaag
cgcgtcaccggcatcgtcagccgtggcggttcgatcatggccaagtggtgcctggcgcac
cacaaggaaaacttcctctacacccacttcgaagacatctgcgaaatcatgaaggcctac
gacgtcagcttctcgctgggcgatggcctgcgtccgggctcgattgccgatgccaacgac
gaagcgcagttcggtgagctggaaacccttggcgagctgaccaagatcgcctggaagcac
gacgtgcaatgcatgatcgaaggcccgggccatgtgccaatgcagttgatcaaggagaac
atggacaagcagctggaatgctgcgacgaggcgccgttctacaccctcggcccgctgacc
accgacatcgcaccgggctacgaccacatcacctccggcatcggcgcggcgatgatcggc
tggttcggctgcgccatgctctgctacgtgaccccgaaagaacacctggggttgccgaac
aaggatgacgtgaagaccgggatcatcacctacaagatcgccgcccacgcggccgacctt
gccaaaggccacccgggcgcgcagatccgcgacaacgccctgagcaaggcgcgcttcgag
ttccgctgggaagaccagttcaacctcggcctggacccggacaccgctcgctcgtaccac
gacgaaaccctgccgaaggactcggccaaggtcgcgcatttctgctcgatgtgcgggccg
aagttctgctcgatgaagatcacccaggaagttcgcgagtatgcggccaaccagcgcatc
gaagcggtggatgtggacgtcgcccaggggatggcggagcaggctgagcggttcaagcag
gaaggtagtcagctttacaagaaagtgtga
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