KEGG   Pseudomonas mediterranea: E3Z27_02565
Entry
E3Z27_02565       CDS       T08284                                 
Symbol
parE
Name
(GenBank) DNA topoisomerase IV subunit B
  KO
K02622  topoisomerase IV subunit B [EC:5.6.2.2]
Organism
pmed  Pseudomonas mediterranea
Brite
KEGG Orthology (KO) [BR:pmed00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:pmed03032]
    E3Z27_02565 (parE)
   03036 Chromosome and associated proteins [BR:pmed03036]
    E3Z27_02565 (parE)
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:pmed02048]
    E3Z27_02565 (parE)
Enzymes [BR:pmed01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.2  DNA topoisomerase (ATP-hydrolysing)
     E3Z27_02565 (parE)
DNA replication proteins [BR:pmed03032]
 Prokaryotic type
  DNA Topoisomerases
   E3Z27_02565 (parE)
Chromosome and associated proteins [BR:pmed03036]
 Prokaryotic type
  Chromosome partitioning proteins
   Other chromosome partitioning proteins
    E3Z27_02565 (parE)
Prokaryotic defense system [BR:pmed02048]
 Toxin-antitoxin system (TA system)
  Type II TA system
   Type II TA system related factors
    E3Z27_02565 (parE)
SSDB
Motif
Pfam: DNA_gyraseB DNA_gyraseB_C HATPase_c Toprim HATPase_c_2 HATPase_c_3 TOPRIM_C
Other DBs
NCBI-ProteinID: QHA80640
LinkDB
Position
595131..597035
AA seq 634 aa
MATPSASSYNADAIEVLSGLDPVRKRPGMYTDTSRPNHLAQEVIDNSVDEALAGHAKSVQ
VILHADHSLEVSDDGRGMPVDIHPEEGVSGVELILTKLHAGGKFSNKNYQFSGGLHGVGI
SVVNALSTQVRVRVKRDGNEYQMTFADGYKATELEVVGSVGKRNTGTSVYFAPDPKYFDS
PKFSVSRLKHVLKAKAVLCPGLLVSFEDKATGEKVEWHYEDGLRSYLVDAVSGFERLPDE
PFCGSLAGNKEAVDWALLWLPEGGESVQESYVNLIPTAQGGTHVNGLRQGLLDAMREFCE
FRNLLPRGVKLAPEDVWERIAFVLSMKMQEPQFSGQTKERLSSREAAAFVSGVVKDAFSL
WLNANPETGLALAELAISNAGRRLKASKKVERKRITQGPALPGKLADCAGQDPMRSELFL
VEGDSAGGSAKQARDKEFQAILPLRGKILNTWEVDGSEVLASQEVHNIAVAIGVDPGAED
MSQLRYGKICILADADSDGLHIATLLCALFVQHFRPLVDAGHVYVAMPPLYRIDLGKDIY
YALDEAERDGILDRLVAEKKRGKPQVTRFKGLGEMNPPQLRETTMDPNTRRLVQLTLDDF
AATSEIMDMLLAKKRAGDRKSWLESKGDLAEVLA
NT seq 1905 nt   +upstreamnt  +downstreamnt
atggccactcccagcgctagctcttataacgcagacgccatcgaagtcctctcgggcctc
gacccggtgcgcaagcgccccggcatgtacaccgacaccagtcggccgaaccacctcgcc
caggaagtcatcgacaacagtgtcgacgaagccttggccgggcacgccaaatcggtgcag
gtcatcctgcatgcggaccattcgctggaggtcagcgatgacggccgtggcatgccggtg
gacattcaccccgaagagggcgtgtcgggcgtcgagctgatcctcaccaagctccacgca
ggcggcaagttttccaacaagaactaccagttctccggcggtctgcacggggtgggtatt
tccgtggtcaacgccttgtcgacccaggtccgggtgcgggtcaagcgtgacggcaacgaa
taccagatgacgttcgccgacggctacaaggccaccgagctggaggtggtcggcagcgtc
ggcaagcgcaacaccggcaccagcgtgtatttcgcgccggatccgaagtatttcgattcg
ccgaagttctccgtcagccgcctcaagcatgtgctcaaggcgaaggccgtgttgtgcccg
gggctgttggtcagtttcgaggacaaggccactggcgagaaagtcgagtggcattacgaa
gatggtctgcgctcctatctggtagacgcggtcagtggctttgaacggctgcccgacgaa
ccgttctgcgggagcctggcgggtaacaaggaggcggtggactgggcgctgctgtggttg
cccgaggggggcgagagcgtccaggaaagctacgtcaacctgattcccacggcccagggc
ggtacccacgtcaacgggttgcgccaaggcctgctcgatgcgatgcgtgagttctgcgaa
ttccgcaacctgctgccccgtggggtgaagctggcgccggaggacgtgtgggagcgcatt
gccttcgtgctgtcgatgaagatgcaggaaccgcagttctccgggcagaccaaggagcgc
ttgtcgtcccgtgaagcggcggcgttcgtgtccggtgtggtcaaggatgcgttcagcctg
tggctcaatgccaaccccgaaaccggcctggccctggcggaattggcgatcagcaacgcc
ggccgtcgtctcaaggccagcaagaaggtcgagcgcaagcgcatcacccaggggccggcg
ttgccgggcaagctcgccgattgcgcggggcaggaccctatgcgttccgagctgttcctg
gtggaaggtgattctgccggtggctcggccaagcaggctcgagacaaggaattccaggcg
atcctgccgttgcggggcaagatcctcaacacttgggaagtggacggcagcgaagtactg
gccagccaggaagtgcacaatatcgctgtggccatcggggtcgatccgggcgccgaggac
atgagccagttgcgttacggcaagatctgcatcctcgccgacgccgactccgacggcctg
cacatcgcaaccttgctctgcgccttgttcgtccagcatttccgtccgttggtggacgcc
ggtcatgtctatgtcgccatgccgccgctgtaccgtatcgacctgggcaaggacatttac
tacgccctggacgaagccgagcgtgacggcatcctcgaccgcctggtggccgagaagaag
cgcggcaagccgcaggtcacccgattcaagggcctgggcgagatgaacccgccgcagttg
cgcgaaaccaccatggacccgaacacccgtcgcttggtgcaactgaccctggacgatttc
gccgcgacttcggaaatcatggacatgctgctggcgaagaaacgtgccggtgatcgcaag
tcctggctcgaatccaagggtgacctggccgaggtgttggcctga

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