KEGG   Pseudomonas mediterranea: E3Z27_02630
Entry
E3Z27_02630       CDS       T08284                                 
Name
(GenBank) oligoribonuclease
  KO
K13288  oligoribonuclease [EC:3.1.-.-]
Organism
pmed  Pseudomonas mediterranea
Pathway
pmed03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:pmed00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    E3Z27_02630
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pmed03019]
    E3Z27_02630
   03009 Ribosome biogenesis [BR:pmed03009]
    E3Z27_02630
Messenger RNA biogenesis [BR:pmed03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     E3Z27_02630
Ribosome biogenesis [BR:pmed03009]
 Eukaryotic type
  Pre-60S particles
   RNases
    E3Z27_02630
SSDB
Motif
Pfam: RNase_T Rv2179c-like
Other DBs
NCBI-ProteinID: QHA80652
LinkDB
Position
613311..613853
AA seq 180 aa
MQNPQNLIWIDLEMTGLNPDTDVIIEMATIVTDSDLNTLAEGPVIAIHHSDEVLAGMDEW
NTRQHGGSGLTQRVRESKISMAEAEAQTIAFLEQWVPKGKSPICGNSICQDRRFLYTHMK
SLESYFHYRNLDVSTLKELAARWAPQVRDSFQKGGSHLALDDIRESIAELQHYRKHFIKF
NT seq 543 nt   +upstreamnt  +downstreamnt
atgcaaaacccgcagaacctgatctggatcgacctggaaatgaccggtctgaaccccgac
accgacgtcatcatcgaaatggccaccatcgtgaccgacagtgatctcaacaccctggcc
gaaggcccggtgatcgcgatccatcatagcgacgaggtactggccggcatggacgaatgg
aacacccgccagcacggcggctcgggcctgacccagcgggtacgcgagagcaagatcagc
atggccgaggccgaggcccagaccatcgccttcctcgagcagtgggtgccgaagggcaaa
tcaccgatctgcggcaacagcatctgccaggaccggcgcttcctttatacccacatgaag
tccctggaaagctatttccactaccgcaacctggacgtctccaccctcaaggaactggcc
gcccgctgggcgccgcaagtgcgtgacagcttccagaagggcggcagccacctggcactg
gacgacattcgcgagtccattgccgagctgcagcattaccgcaagcatttcatcaagttc
tga

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