Pseudomonas mediterranea: E3Z27_02630
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Entry
E3Z27_02630 CDS
T08284
Name
(GenBank) oligoribonuclease
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
pmed
Pseudomonas mediterranea
Pathway
pmed03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
pmed00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
E3Z27_02630
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pmed03019
]
E3Z27_02630
03009 Ribosome biogenesis [BR:
pmed03009
]
E3Z27_02630
Messenger RNA biogenesis [BR:
pmed03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
E3Z27_02630
Ribosome biogenesis [BR:
pmed03009
]
Eukaryotic type
Pre-60S particles
RNases
E3Z27_02630
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
Motif
Other DBs
NCBI-ProteinID:
QHA80652
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All DBs
Position
613311..613853
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AA seq
180 aa
AA seq
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MQNPQNLIWIDLEMTGLNPDTDVIIEMATIVTDSDLNTLAEGPVIAIHHSDEVLAGMDEW
NTRQHGGSGLTQRVRESKISMAEAEAQTIAFLEQWVPKGKSPICGNSICQDRRFLYTHMK
SLESYFHYRNLDVSTLKELAARWAPQVRDSFQKGGSHLALDDIRESIAELQHYRKHFIKF
NT seq
543 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaacccgcagaacctgatctggatcgacctggaaatgaccggtctgaaccccgac
accgacgtcatcatcgaaatggccaccatcgtgaccgacagtgatctcaacaccctggcc
gaaggcccggtgatcgcgatccatcatagcgacgaggtactggccggcatggacgaatgg
aacacccgccagcacggcggctcgggcctgacccagcgggtacgcgagagcaagatcagc
atggccgaggccgaggcccagaccatcgccttcctcgagcagtgggtgccgaagggcaaa
tcaccgatctgcggcaacagcatctgccaggaccggcgcttcctttatacccacatgaag
tccctggaaagctatttccactaccgcaacctggacgtctccaccctcaaggaactggcc
gcccgctgggcgccgcaagtgcgtgacagcttccagaagggcggcagccacctggcactg
gacgacattcgcgagtccattgccgagctgcagcattaccgcaagcatttcatcaagttc
tga
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