Pseudomonas mediterranea: E3Z27_03775
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Entry
E3Z27_03775 CDS
T08284
Symbol
carB
Name
(GenBank) carbamoyl-phosphate synthase large subunit
KO
K01955
carbamoyl-phosphate synthase large subunit [EC:
6.3.5.5
]
Organism
pmed
Pseudomonas mediterranea
Pathway
pmed00220
Arginine biosynthesis
pmed00240
Pyrimidine metabolism
pmed00250
Alanine, aspartate and glutamate metabolism
pmed01100
Metabolic pathways
pmed01110
Biosynthesis of secondary metabolites
pmed01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
pmed00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
E3Z27_03775 (carB)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
E3Z27_03775 (carB)
00220 Arginine biosynthesis
E3Z27_03775 (carB)
Enzymes [BR:
pmed01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.5 Carbon-nitrogen ligases with glutamine as amido-N-donor
6.3.5.5 carbamoyl-phosphate synthase (glutamine-hydrolysing)
E3Z27_03775 (carB)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CPSase_L_D2
CPSase_L_D3
MGS
ATP-grasp
ATP-grasp_3
Dala_Dala_lig_C
ATP-grasp_4
ATPgrasp_Ter
RimK
ATP-grasp_5
CoA_binding_2
Xre-like-HTH
Motif
Other DBs
NCBI-ProteinID:
QHA80854
LinkDB
All DBs
Position
908828..912049
Genome browser
AA seq
1073 aa
AA seq
DB search
MPKRTDIKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPAM
ADATYIEPIKWQTVAKIIEKERPDALLPTMGGQTALNCALDLEREGVLEKFGVEMIGANA
DTIDKAEDRSRFDKAMKAIGLECPRSGIAHSMEEANAVLEKLGFPCIIRPSFTMGGTGGG
IAYNREEFEEICARGLDLSPTKELLIDESLIGWKEYEMEVVRDKKDNCIIVCSIENFDPM
GVHTGDSITVAPAQTLTDKEYQILRNASLAVLREIGVETGGSNVQFGICPNTGRMVVIEM
NPRVSRSSALASKATGFPIAKVAAKLAVGYTLDELSNDITGGKTPASFEPSIDYVVTKLP
RFAFEKFAKADARLTTQMKSVGEVMAIGRTFQESLQKALRGLEVGVCGLDPKLDLSNPES
MSELKRELTVPGAERIWYVADAFRAGMTVEQIFDMNMIDPWFLVQIEDLIKEEEKVKTLG
MSSIDRDMMFRLKRKGFSDQRLAKLLGVTEKSLRAHRHKLEVFPVYKRVDTCAAEFATDT
AYLYSTYEEECEAAPSTRDKIMILGGGPNRIGQGIEFDYCCVHAALALRDDGYETIMVNC
NPETVSTDYDTSDRLYFEPVTLEDVLEIVRVEKPKGVIVQYGGQTPLKLARALEAAGVPI
IGTSPDAIDRAEDRERFQQMVERLNLRQPPNATVRSEDEAIRAAAKIGYPLVVRPSYVLG
GRAMEIVYQEEELKRYLREAVQVSNDSPVLLDHFLNCAIEMDVDAVCDGKDVVIGAIMQH
IEQAGVHSGDSACSLPPYSLPAHIQDEMREQVKKMALELGVVGLMNVQLALQGEDIYVIE
VNPRASRTVPFVSKCIGVSLAMIAARVMAGKTLAELGFTKEIIPNFYSVKEAVFPFAKFP
GVDPILGPEMKSTGEVMGVGDTFGEAFAKAQMGASEVLPTGGTAFISVRDDDKPLVAGVA
RDLINLGFEVVATAGTARLIEAAGLKVRRVNKVTEGRPHVVDMIKNDEVTLIINTTEGRQ
SIADSYSIRRNALQHKIYCTTTIAAGEAICEALKFGPEKTVRRLQDLHAGLKA
NT seq
3222 nt
NT seq
+upstream
nt +downstream
nt
atgccaaaacgtacagacataaaaagcatcctgattctcggcgctggcccgatcgtgatc
ggccaggcctgcgaattcgactactccggcgcccaggcttgcaaagccctgcgcgaagag
ggttatcgcgtcatcctggtgaactccaacccggccaccatcatgaccgacccggccatg
gccgacgccacctacatcgagccgatcaagtggcagaccgttgccaagatcatcgagaaa
gaacgtcccgatgcactgttgccgaccatgggcggccagacggcgctgaactgcgccctg
gacctggaacgcgaaggcgtcctggaaaaattcggtgtggaaatgatcggcgccaatgcc
gacaccatcgacaaggccgaagatcgttcgcgctttgacaaggcaatgaaagccatcggc
ctggaatgcccacgctcgggcatcgcccacagcatggaagaggccaacgcggtcctcgag
aagctcggcttcccgtgcatcatccgcccgtccttcaccatgggcggcaccggtggtggc
atcgcttacaaccgtgaagagttcgaagaaatctgcgcccgtggcctggacttgtcgccg
accaaggaactgctgatcgacgaatccctgatcggctggaaagagtacgaaatggaggtt
gtccgcgacaaaaaggacaactgcatcatcgtctgctccatcgaaaacttcgacccgatg
ggtgtacacaccggcgactcgatcaccgtcgcaccggcccagaccctgaccgacaaggaa
taccagatcctgcgtaacgcctccctggcggtattgcgtgagatcggcgtggaaaccggc
ggctccaacgtccagttcggcatctgcccgaacaccgggcgcatggtggtcatcgaaatg
aacccgcgggtttcccgttcgtcggccctggcttcgaaagccaccggtttcccgattgcc
aaggtcgccgccaagctggccgtgggttacaccctcgacgagctgtcgaacgacatcacc
ggcggcaagaccccggcgtccttcgagccgtccatcgactacgtcgtcaccaagctgcca
cgttttgccttcgaaaaattcgccaaggccgacgctcgcctgaccacccagatgaagtcg
gtcggtgaagtcatggccatcggccggaccttccaggagtccctgcagaaagcccttcgc
ggcctggaagtgggtgtctgcggcctcgatccgaaactggacctgagcaacccggaaagc
atgagcgaactcaagcgcgagctgaccgtgccgggcgccgagcgtatctggtacgtggcc
gatgccttccgtgccggcatgaccgtggaacaaatcttcgacatgaacatgatcgaccct
tggttcctggtgcagatcgaagatctgatcaaggaagaggagaaggtcaagaccctgggc
atgtccagcatcgaccgcgacatgatgttccgcctcaagcgcaagggcttctcggaccag
cgcctggccaaattgctgggcgtgaccgagaagagcctgcgcgctcatcgtcacaagctg
gaagtgttcccggtctacaagcgcgtcgacacctgcgcggccgagttcgccaccgacact
gcctacctgtactccacgtacgaagaagagtgcgaagccgcgccatcgacgcgcgacaag
atcatgatcctgggtggcggtcccaaccgcatcggccagggcatcgaattcgactactgc
tgcgtacacgccgcactggccctgcgcgacgacgggtacgagaccattatggtcaactgc
aacccggaaaccgtgtccaccgactacgacacctccgaccgtctgtacttcgaaccggtg
accctggaagacgtgctggaaatcgtccgtgtcgagaagccgaaaggcgtgatcgtccag
tacggcggccagactccgttgaaactggcccgcgccctggaagctgctggtgtgccgatc
atcggtaccagcccggatgccatcgaccgtgccgaagaccgtgagcgcttccagcagatg
gtcgagcgcctgaacctgcgtcaaccgccaaacgccactgtgcgcagcgaagacgaagcg
attcgcgccgccgccaagatcggctatccgctggtggtgcgtccgtcctatgtactgggc
ggccgtgcgatggaaatcgtctaccaggaagaagaactcaagcgctacctgcgcgaagcg
gtccaggtgtccaatgacagcccggtgctgctggaccacttcctcaactgcgccatcgag
atggacgtggatgcggtctgcgacggcaaggacgtggtgatcggcgcgatcatgcagcac
atcgagcaggccggtgttcactccggtgactccgcatgctcgctgccgccttactcgctg
ccggctcacatccaggacgagatgcgcgagcaggtcaagaaaatggccctggaactgggt
gtggtcggcctgatgaacgtgcaactggcacttcagggcgaagacatctacgtcatcgaa
gtgaacccgcgcgcgtcccgtaccgtgccgttcgtctccaagtgcatcggtgtttccctg
gcgatgatcgctgcccgggtaatggccggcaagaccctggcggagcttggcttcaccaag
gagatcattccgaacttctacagcgtgaaagaagcggtgttcccgttcgccaagttccct
ggcgtcgacccgatcctcggccctgagatgaagtccaccggtgaggtgatgggcgttggc
gatacctttggcgaggcgttcgccaaggcccagatgggcgccagcgaagtcctgccgaca
ggcggcacggcgttcatcagcgtgcgtgatgacgacaagccactggttgcaggcgtggcc
cgtgatctgatcaacttgggcttcgaagtggttgccactgccggtaccgcccggctgatc
gaggccgcaggcctgaaagtgcgccgcgtgaacaaggtgaccgaagggcgtccacatgtg
gtcgacatgatcaagaatgacgaagtcacgctgatcatcaacaccactgaaggccgtcag
tcgatcgccgactcctactccattcgtcgcaacgcgctgcagcacaagatctactgcacc
accacgattgctgcgggcgaagcgatctgcgaagcgctcaagttcggtcccgagaagacc
gtccgtcgcttgcaggatctacatgcaggattgaaggcatga
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