Pseudomonas mediterranea: E3Z27_03865
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Entry
E3Z27_03865 CDS
T08284
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
pmed
Pseudomonas mediterranea
Pathway
pmed03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pmed00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
E3Z27_03865 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pmed03019
]
E3Z27_03865 (pnp)
03016 Transfer RNA biogenesis [BR:
pmed03016
]
E3Z27_03865 (pnp)
Enzymes [BR:
pmed01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
E3Z27_03865 (pnp)
Messenger RNA biogenesis [BR:
pmed03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
E3Z27_03865 (pnp)
Transfer RNA biogenesis [BR:
pmed03016
]
Prokaryotic type
tRNA degradation factors
E3Z27_03865 (pnp)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
PNPase
RNase_PH_C
S1
KH_1
S1_RRP5
KH-I_KHDC4-BBP
KH_2
OB_RRP5_4th
KH_PNO1_2nd
S1_2
S1_TP0910
KH_KhpA-B
Motif
Other DBs
NCBI-ProteinID:
QHA80867
LinkDB
All DBs
Position
926600..928705
Genome browser
AA seq
701 aa
AA seq
DB search
MNPVIKKFQFGQSTVTLETGRIARQASGAVLVTVDDDVSVLVTVVGAKQADPGKGFFPLS
VHYQEKTYAAGKIPGGFFKREGRPSEKETLTSRLIDRPIRPLFPEGFMNEVQVVCTVVST
SKKTDPDIAAMIGTSAALAISGIPFDGPIGAARVAFHESTGYLLNPTYEQLKASSLDMVV
AGTSEAVLMVESEAKELTEDQMLGAVLFAHDEFQVVINAVKELAAEAAKPTWTWAPQAEA
TELLGAIRAEFGEAISQAYTITVKADRYARLGELKDQVVAKLSGEEGQPSAADVKAAFGE
IEYRTVRENIVNGKPRIDGRDTRTVRPLNIEVGVLPKTHGSALFTRGETQALVVATLGTA
RDAQLLDTLEGEKKDPFMLHYNFPPFSVGECGRMGGAGRREIGHGRLARRSVQAMLPDAD
VFPYTIRVVSEITESNGSSSMASVCGASLALMDAGVPMKAPVAGIAMGLVKEGEKFAVLT
DILGDEDHLGDMDFKVAGTAKGVTALQMDIKIKGITEEIMEIALGQALEARLNILGQMNQ
VIGQSRTELSENAPTMIAMKIDTDKIRDVIGKGGATIRAICEETKASIDIEDDGSIKIFG
ETKEAAEAARQRVLGITAEAEIGKIYVGKVERIVDFGAFVNILPGKDGLVHISMLSDARV
EKVTDILKEGQEVEVLVLDVDNRGRIKLSIKDVAAAKASGV
NT seq
2106 nt
NT seq
+upstream
nt +downstream
nt
gtgaacccggtaatcaaaaaattccagttcggtcagtcgaccgttaccctcgagactggc
cgtatcgcccgtcaggcctccggcgcagtgctggtcaccgttgacgacgacgtcagcgta
ttggtgaccgtagtcggtgccaagcaagccgatccaggcaagggcttcttccctctgtct
gttcactaccaggaaaagacttacgctgccggtaagatccctggcggtttcttcaagcgc
gaaggccgtccttccgagaaagaaaccctgacttcccgactgatcgaccgtccgatccgt
cccctgttcccagaaggcttcatgaacgaagtgcaggttgtctgcaccgtcgtctccacc
agcaagaagaccgatccggacatcgctgcgatgatcggtacctcggccgcgctggccatc
tccggcattcctttcgatggcccgatcggcgctgcccgcgttgcgttccatgaaagcacc
ggctacctgctgaacccgacctacgagcaactgaaggcttcgagcctggacatggtcgtt
gccggtacttccgaagccgtgctgatggttgaatccgaagccaaggaactgaccgaagac
cagatgctgggcgccgtactgttcgcccacgacgagttccaggtggtgatcaacgccgtc
aaggaactggccgccgaagccgccaagccaacctggacctgggctccgcaagccgaagcc
accgagctgctgggtgcgatccgtgccgagttcggcgaagcgatctcccaggcctacacc
atcaccgtcaaggccgaccgttatgcacgcctgggcgagttgaaggatcaggtcgttgcc
aagctgtccggcgaagaaggccagccatcggccgccgacgtgaaggctgctttcggtgaa
atcgaataccgcaccgttcgcgagaacatcgtcaacggcaagccacgtatcgacggtcgc
gacacccgcaccgtacgtccgctgaacatcgaagtcggcgtactgccgaagacccacggt
tcggcactgttcacccgtggcgaaacccaggccctggtcgttgccacactgggcaccgcc
cgtgacgcgcagctgctggacaccctggaaggcgaaaagaaagacccgttcatgctgcac
tacaacttccctccgttctcggtgggcgagtgtggtcgcatgggtggcgccggtcgccgc
gaaatcggtcacggccgtctggcccgtcgttccgtccaggccatgctgccggacgccgat
gtgttcccgtacaccatccgcgtggtatcggaaatcaccgagtccaacggttcgagctcc
atggcttcggtctgcggcgcttccctggcgttgatggacgctggcgtgccgatgaaggcg
ccggttgccggtatcgccatgggcctggtgaaggaaggcgagaaatttgccgtcctgacc
gacatcctgggtgacgaagaccacctgggcgatatggacttcaaagtggccggtaccgcc
aagggcgtgaccgcgctgcagatggacatcaagatcaagggcatcaccgaagagatcatg
gaaatcgccctgggccaggccctggaagcgcgcctgaacatcctcggccagatgaaccag
gtgatcggtcagtcccgtaccgaactgtcggaaaacgctccgaccatgatcgcgatgaag
atcgacaccgacaagatccgtgatgtcatcggtaaaggcggcgcgaccatccgtgcgatc
tgcgaagaaaccaaggcttcgatcgacatcgaagacgacggttcgatcaagatcttcggt
gaaaccaaggaagcggcagaagcagcacgccagcgcgtcctgggcatcaccgcagaagcc
gagatcggcaagatctacgtcggcaaggtcgagcgcatcgtcgacttcggcgccttcgtc
aacatcctgccgggcaaggacggtctggttcacatctccatgctgagcgatgctcgcgtc
gagaaagtgaccgacatcctgaaagaaggccaggaagtggaagtgctggtactggacgtg
gacaaccgcggccgtatcaagctgtccatcaaggacgtcgcagcagccaaggcatcgggc
gtttaa
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