Pseudomonas mediterranea: E3Z27_04210
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Entry
E3Z27_04210 CDS
T08284
Symbol
rapZ
Name
(GenBank) RNase adapter RapZ
KO
K06958
RNase adapter protein RapZ
Organism
pmed
Pseudomonas mediterranea
Brite
KEGG Orthology (KO) [BR:
pmed00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pmed03019
]
E3Z27_04210 (rapZ)
Messenger RNA biogenesis [BR:
pmed03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
E3Z27_04210 (rapZ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PapZ_C
RapZ-like_N
AAA_18
AAA_22
AAA_28
CoaE
SKI
AAA_29
nSTAND_NTPase5
FtsK_SpoIIIE
RsgA_GTPase
T2SSE
AAA_16
ABC_tran
Motif
Other DBs
NCBI-ProteinID:
QHA80934
LinkDB
All DBs
Position
complement(1012593..1013450)
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AA seq
285 aa
AA seq
DB search
MRLIIVSGRSGSGKSTALNVLEDSGYYCIDNLPAGLLPELAERALIHTELAQPLVAVSID
ARNLPSHLSRFPELLEEVRNRHIQCDVLYLDADDETLLKRFSETRRRHPLSNASRSLAEA
IEDESQLLGPIADLADLKVNTTNLNLYQLRDTIKLRLLNQPEPGTAFLVESFGFKRGMPV
DADLVFDVRCLPNPYWKPELREQSGLDQPVIDYLAAQPDVEEMFQDISGYLLKWLPRFAA
SNRAYVTIAIGCTGGHHRSVYLTERLGQLLQQSLKNVQVRHRDLS
NT seq
858 nt
NT seq
+upstream
nt +downstream
nt
atgcgcctgatcatcgtcagcggccgctccggctccggtaaaagcacggcgctcaatgtg
cttgaggacagcggctactattgcatcgacaacctgccggccggcctgctgccggagttg
gccgaacgggcgctgatccacaccgagctggcgcaaccgctggtggcggtatccatcgac
gcacgcaacctgccgagccacctgtcgcgtttccccgaactgctcgaggaagtgcgcaac
cggcatatccagtgcgatgtgctgtacctggatgccgatgacgaaacactgctcaagcgt
ttctccgagacccggcggcgccacccgctgagcaatgccagccgctccctggccgaagcc
atcgaggacgaaagccagttgctcgggccgatcgccgacctggcggacctgaaggtcaac
accacgaacctgaacctgtatcagttgcgcgacaccatcaagttgcgcctgctgaaccag
ccggagccaggcacggcgttcctggtggaatcgttcggcttcaagcgtggcatgccggta
gacgccgacctggtgttcgatgtccgttgcctgcccaacccctattggaagccggagctg
cgcgagcaatccgggctcgatcagccggtgatcgactacctggctgcccaaccggatgtc
gaggaaatgttccaggacatctccggttacctgctcaaatggctgccccggtttgccgcc
agcaaccgcgcctatgtcacgattgccatcggttgtaccggtggtcatcaccgctctgtc
tacctgaccgagcgcctgggtcagctcctgcaacaatccctgaagaacgtccaggttcgc
caccgcgacctcagctaa
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