Pseudomonas mediterranea: E3Z27_05500
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Entry
E3Z27_05500 CDS
T08284
Symbol
dapE
Name
(GenBank) succinyl-diaminopimelate desuccinylase
KO
K01439
succinyl-diaminopimelate desuccinylase [EC:
3.5.1.18
]
Organism
pmed
Pseudomonas mediterranea
Pathway
pmed00300
Lysine biosynthesis
pmed01100
Metabolic pathways
pmed01120
Microbial metabolism in diverse environments
pmed01230
Biosynthesis of amino acids
Module
pmed_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
pmed00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
E3Z27_05500 (dapE)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pmed01002
]
E3Z27_05500 (dapE)
Enzymes [BR:
pmed01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.18 succinyl-diaminopimelate desuccinylase
E3Z27_05500 (dapE)
Peptidases and inhibitors [BR:
pmed01002
]
Metallo peptidases
Family M20
E3Z27_05500 (dapE)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Peptidase_M20
M20_dimer
Peptidase_M28
BNR_2
Motif
Other DBs
NCBI-ProteinID:
QHA81174
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All DBs
Position
complement(1279913..1281064)
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AA seq
383 aa
AA seq
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MTAHADLSPTLQLACDLIRRPSVTPVDADCQKLMMQRLGDAGFKLEPMRIEDVDNFWASH
GKHDGPVLCFAGHTDVVPTGPVQAWQLDPFDAVIDDEGMLCGRGAADMKGSLAAMVVAAE
RFVADYPDHKGSITFLITSDEEGPAHHGTKAVVERLKARQERLDWCIVGEPSSTTLVGDV
VKNGRRGSLGAKLTVRGKQGHVAYPHLAKNPIHLAAPALAELAAEHWDHGNDFFPPTSFQ
ISNLNSGTGATNVIPGDLVAVFNFRFSTESTVEGLQQRVADILDKHQLDWHIDWALSGLP
FLTEPGALLDAVSSSIKDVTGRETQASTSGGTSDGRFIATMGTQVVELGPVNATIHQVNE
RVLAADLDVLTEIYYKTLIKLLA
NT seq
1152 nt
NT seq
+upstream
nt +downstream
nt
atgacggcccacgccgacctctcgccgaccctgcaactcgcctgcgacctgatccgccgt
ccgtccgtgacgccggtggatgccgattgccagaaactgatgatgcagcgcctcggcgat
gcgggtttcaagctcgagccgatgcgcatcgaggatgtggataacttctgggccagccat
ggcaagcacgacggtccggtactgtgcttcgccgggcacaccgacgtggtaccgaccggt
ccggtgcaagcctggcagctcgatccattcgacgcggtgatcgacgatgagggcatgctg
tgtggccgtggcgcggccgacatgaagggcagcctcgcggcgatggtggtggcggctgag
cgcttcgtcgccgattacccggaccacaagggctcgatcaccttcctgatcaccagtgat
gaagaaggtccggctcaccacggcaccaaggccgtggtcgagcgcctcaaggcccgccag
gagcgcctggactggtgtatcgtcggtgagccgtcgagcaccaccctggtaggcgacgtg
gtcaagaacggtcgtcgcggctccctcggtgcgaagctgaccgtgcgcggcaagcaaggc
cacgtggcctacccgcacctggcgaagaacccgattcacctggcggctccggcgctggca
gaactggccgccgagcattgggaccatggcaacgatttcttcccgcccaccagtttccag
atctccaacctcaactccggcaccggcgcgaccaacgtgatcccgggggacctggtggcg
gtgttcaacttccgcttctccaccgagtccactgtcgaaggcctgcaacagcgcgtcgcc
gacattctcgacaagcatcaactggactggcacatcgactgggccctgtccggcctgccg
ttcctcaccgagccgggcgcgctgttggacgccgtgtcgtcgagcatcaaggacgtgacc
ggtcgcgaaacccaggcctccaccagcggcggcacctccgacggtcgtttcatcgccacc
atgggcacccaagtagtggaactggggccggtcaacgcgaccatccaccaggtcaacgaa
cgcgtgctggcggccgatctcgatgtgctcaccgagatctactacaagacgctgatcaag
ttgctcgcctga
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