Pseudomonas mediterranea: E3Z27_05505
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Entry
E3Z27_05505 CDS
T08284
Symbol
tcdA
Name
(GenBank) tRNA cyclic N6-threonylcarbamoyladenosine(37) synthase TcdA
KO
K22132
tRNA threonylcarbamoyladenosine dehydratase
Organism
pmed
Pseudomonas mediterranea
Brite
KEGG Orthology (KO) [BR:
pmed00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pmed03016
]
E3Z27_05505 (tcdA)
Transfer RNA biogenesis [BR:
pmed03016
]
Prokaryotic type
tRNA modification factors
Other tRNA modification factors
E3Z27_05505 (tcdA)
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GFIT
Motif
Pfam:
ThiF
3HCDH_N
Sacchrp_dh_NADP
NAD_binding_7
AlaDh_PNT_C
Motif
Other DBs
NCBI-ProteinID:
QHA81175
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Position
1281326..1282144
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AA seq
272 aa
AA seq
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MVMSTEDPRFAGIARLYGLEGLERLRAAHVAIVGVGGVGSWAAEAIARCGVGEISLFDLD
DVCVSNANRQLHALDSTVGKPKVEVMAERLRGINPDCTVHAVADFVTRDTMAEYITPNID
CVIDCIDSVNAKAALIAWCKRRKIQIITTGGAGGQIDPTLIQVCDLNRTFNDPLASKVRS
TLRRDYGFSRTVTRHYSVPCVFSTEQLRYPKPDGSICLQKSFVGDGVKLDCAGGFGAVMM
VTATFGMVAATKAVDKIVAGVRRPADRAKPGQ
NT seq
819 nt
NT seq
+upstream
nt +downstream
nt
atggtcatgagtacagaagatccacggtttgccggcatcgcccgtttgtatggcctcgaa
ggcctggaacgcctgcgggcggcccatgtggcgattgtcggggtgggcggggtcggttcc
tgggcggcggaagccattgcccggtgtggcgtgggcgagatttcgctgttcgacctggac
gacgtctgcgtcagcaacgccaaccggcagttgcacgcgctggacagcaccgtcggcaaa
cccaaggtcgaggtgatggccgagcgcctgcgcgggatcaatcccgattgcacggtgcac
gccgtggcggacttcgtcacccgcgacaccatggccgaatacatcacgccgaacatcgac
tgcgtgatcgactgcatcgacagtgtcaacgccaaggcggcgctgatcgcctggtgcaag
cgccgcaagatccagatcatcaccaccggcggcgcgggcgggcagatcgacccgacgctg
atccaggtctgcgacctgaaccgtaccttcaacgatccgctggcttcgaaagtgcgctcg
actctgcgccgcgactatggcttctctcgaaccgtgacccgtcactacagcgtgccctgt
gtgttctccaccgaacaactgcgttaccccaaaccggacggcagcatttgcttgcagaag
agtttcgtcggcgacggcgtgaaactcgactgcgccggcgggtttggcgcggtgatgatg
gtgacggcgacgttcggcatggtcgcggcgaccaaggctgtggataagatcgttgcgggt
gtgcgacggccggcggatagggccaagcctgggcagtga
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