Pseudomonas mediterranea: E3Z27_05705
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Entry
E3Z27_05705 CDS
T08284
Symbol
truD
Name
(GenBank) tRNA pseudouridine(13) synthase TruD
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
pmed
Pseudomonas mediterranea
Brite
KEGG Orthology (KO) [BR:
pmed00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pmed03016
]
E3Z27_05705 (truD)
Enzymes [BR:
pmed01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
E3Z27_05705 (truD)
Transfer RNA biogenesis [BR:
pmed03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
E3Z27_05705 (truD)
Prokaryotic type
E3Z27_05705 (truD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
Motif
Other DBs
NCBI-ProteinID:
QHA81213
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All DBs
Position
1323939..1324997
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AA seq
352 aa
AA seq
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MTELELLGPRAYGESLGSAVLKATAEDFQVDEVLDIPLSGDGEHLWIWVEKRGLNTEEAA
RRIAKAAGVPLRTVSYAGLKDRQALTRQWFSVQLPGKADPDLSAAENDTLKILKTGRHRR
KLQRGAHSANGFTLRLTQFNGDPAAIDARLQQIVCQGIPNYYGAQRFGHDGGNVVDARGW
AARKALPEQRNVRSRLLSAARSFLFNRVLAARVADGTWQQAQVGDLLAFTDSRSFFPAGE
AECNDPRLAILDLHPTGPQWGEGPSPASGVIHDLEQAVAEGEADLRDWLVNAGMNHERRI
LRLPIGGLSWHYPSPDILQLEFVLPAGCFATVLVRELVDLVPVGQTDSPCVF
NT seq
1059 nt
NT seq
+upstream
nt +downstream
nt
atgaccgaactggaattgttggggccgcgtgcctatggcgagtcgctgggcagtgctgtg
ctcaaggccactgccgaagatttccaggtcgatgaagtgctcgacatcccgttgagcggc
gatggcgagcatttgtggatctgggtcgaaaagcgcggcttgaacaccgaggaagcggcc
cggcggattgccaaggctgccggcgtgccgctgcgcaccgtcagctacgccgggctcaag
gaccgtcaggccctgacccggcaatggttcagtgttcaattgccgggcaaggcggatccg
gacctgtcggcggcagagaacgatacgctgaagatcctcaagaccgggcgccatagacgc
aagctgcaacgcggcgcccactcggccaatggtttcaccttgcgcctgacccagttcaat
ggcgacccggcggctatcgacgcgcgcctgcaacagatcgtctgccagggtattcccaat
tattacggcgcccagcgttttggtcatgatggcggcaacgtcgtcgacgcccgtggctgg
gcggcacgcaaggctttgccggagcaacgcaacgtgcgttcgcggctgttgtccgcggcc
cgcagtttcctgttcaaccgcgtattggcggcgcgggtggccgacggtacctggcaacaa
gcccaagtgggtgacttgctggccttcaccgacagccgcagttttttcccggccggtgag
gccgaatgcaacgatccgcgcctggcgatcctcgatctgcacccgaccgggccacaatgg
ggtgaaggcccttcaccggcctcgggcgtgatccacgatctggaacaggccgtcgccgag
ggcgaagcggacttgcgtgattggttagtcaatgcgggaatgaatcacgaacgtcgcatc
ctgcgactgcccattggcgggctgtcgtggcattatccctcgcctgacattctgcaactg
gaattcgtcctgccggccggatgtttcgccactgtcttggtgcgcgaactcgtcgatctg
gtgccggtagggcagacggacagcccatgcgtattctga
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