Pseudomonas mediterranea: E3Z27_06510
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Entry
E3Z27_06510 CDS
T08284
Name
(GenBank) long-chain-fatty-acid--CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
pmed
Pseudomonas mediterranea
Pathway
pmed00061
Fatty acid biosynthesis
pmed00071
Fatty acid degradation
pmed01100
Metabolic pathways
pmed01212
Fatty acid metabolism
pmed02024
Quorum sensing
pmed04146
Peroxisome
Module
pmed_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
pmed00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
E3Z27_06510
00071 Fatty acid degradation
E3Z27_06510
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
E3Z27_06510
09145 Cellular community - prokaryotes
02024 Quorum sensing
E3Z27_06510
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
pmed01004
]
E3Z27_06510
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pmed04147
]
E3Z27_06510
Enzymes [BR:
pmed01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
E3Z27_06510
Lipid biosynthesis proteins [BR:
pmed01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
E3Z27_06510
Exosome [BR:
pmed04147
]
Exosomal proteins
Exosomal proteins of breast milk
E3Z27_06510
Exosomal proteins of breast cancer cells
E3Z27_06510
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
AMP-binding_C_2
Motif
Other DBs
NCBI-ProteinID:
QHA81360
LinkDB
All DBs
Position
1481865..1483553
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AA seq
562 aa
AA seq
DB search
MQPDFWNDKRPAGVPSDIDLGAYKSVIEVFERSCKKFADRPAFSNMGVTLTYAELERCSA
AFAGYLQTHTDLVPGDRIAVQMPNVLQYPIAVFGALRAGLIVVNTNPLYTPREMRHQFKD
SGARALVYMNLFGSKVQEVLPDTDLQYLIEAKMGDLMPAAKGWLVNTVVNKVKKMVPAYS
LPQAISFKSALRLGRGQAIKPLKVGLDDIAVLQYTGGTTGLAKGAMLTHGNLVANMQQAR
ACLGQFGDDGQPLLREGQEVMIAPLPLYHIYAFTANCMCMMVTGNHNVLITNPRDIGGFI
KELKNWRFSALLGLNTLFVALMDHPDFKTLDFSSLKLTNSGGTALVKATADRWEQLTGCR
ITEGYGLTETSPVACTNPYGKRSRLGTVGLPVPGTLMKVISDDGTEQPLGERGELCIKGP
QIMKGYWNKPEATAEVLDSEGWFKSGDIAVIDPDGFVRIVDRKKDMIIVSGFNVYPNEIE
DVVMAHPKVANCAVIGVPDERSGEAVKLFVVARETGVSLEELKAYCKENFTGYKIPKHIV
LRESLPMTPVGKILRRELRDIA
NT seq
1689 nt
NT seq
+upstream
nt +downstream
nt
atgcagcctgatttctggaatgacaaacgcccggccggcgtgccctcggacatcgacctg
ggggcctacaagtcggtcatcgaggtgttcgagcgttcctgcaagaaattcgccgaccgc
ccggcgttcagcaacatgggcgtgaccctcacctatgctgagctcgagcgctgcagcgcg
gcgttcgccggttacctgcagacccataccgatctggtccccggtgaccgtatcgcggtg
cagatgcccaatgtcctgcaatatcctattgccgtgttcggtgccttgcgcgccgggctg
attgtggtcaacaccaacccgctgtacacgccgcgggaaatgcgccaccagttcaaggac
tccggtgcccgggcgctggtgtacatgaacctgttcggcagcaaggtccaggaagtgctg
cccgacacggacctgcaatacctgatcgaagcgaaaatgggcgacctgatgcccgccgcc
aagggctggctggtcaacaccgtggtgaacaaggtcaagaaaatggtcccggcgtattcg
ctgccccaggccatttccttcaagagcgccttgcgcctgggacgtggccaggccatcaag
cccctgaaggtcggcctcgacgatatcgcggtgctgcagtacaccggtggcaccaccggc
ttggcaaagggcgcgatgctgacccatggcaacctggtggcgaacatgcaacaggccagg
gcgtgcctgggccagttcggcgacgacggccagccgctgctgcgcgaaggccaggaagtg
atgatcgcgccgttgccgctctatcacatctatgcgttcacggcgaactgcatgtgcatg
atggtcaccggcaaccacaacgtgctgatcaccaacccgagggacatcggcggttttatc
aaggagctgaaaaactggcgtttctcggctttgttggggctcaacacgttgttcgtggcg
ttgatggaccatccggatttcaagaccctggatttctccagcctcaaactcaccaattcc
ggcggcaccgcgctggtcaaggccacggcggatcgttgggagcagctcacgggctgccgt
atcaccgaaggctatggcctgaccgaaacctcgcccgtggcctgtaccaacccttacggc
aagaggtcgcggctgggcacggtgggtctgccggtgccaggcacgctgatgaaagtgatc
agcgacgacggcaccgaacagcccctgggcgagcgtggcgagctgtgcatcaaggggccg
cagatcatgaaaggctactggaacaaacctgaagccactgccgaggtgctggacagcgag
ggttggttcaagtccggtgacatcgcggtgatcgacccggacggtttcgtgcggatcgtc
gaccgcaagaaggacatgatcatcgtctcgggtttcaacgtgtaccccaacgaaatcgaa
gatgtggtgatggcccacccgaaggttgccaattgcgcggtgatcggtgtgccggacgag
cgctcgggggaggcggtgaaactgttcgtggtggcgcgggagacgggcgtcagcctcgaa
gaactcaaggcctactgcaaggagaacttcaccggctacaagatacccaagcacatcgtg
ttgcgagagtcgctgccgatgacaccggtgggcaagatcctgcgccgggagctgcgcgat
atcgcttga
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